| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221356
Identifier: 78221356
GI number: 78221356
Start: 156786
End: 157076
Strand: Reverse
Name: 78221356
Synonym: Gmet_0129
Alternate gene names: NA
Gene position: 157076-156786 (Counterclockwise)
Preceding gene: 78221360
Following gene: 78221355
Centisome position: 3.93
GC content: 62.54
Gene sequence:
>291_bases ATGAAAGGGGCTCACGGACGGTTTTGCGAGGTTTCACAGCTTCTTGCGGGGGATGCCCGGGGAGGACAGCTTGCCGATGA TCTTCTGAATGCCTGTTTCGACCATGTGCTGCCGGAGGATGGCGGCGAGGGGAGCATGAAAACCCTGGCCCATCTCATGG TGACACTGGATCGGTTCAATGCCCACGTGCGACGAGAGGGGGGAGAGGGGCTCTTTGTCGGGTCGCCGGAAGAGGTCGCG GCCTGGGCCGAGGAGCTCACCCGGCAGATCTGGGAGAACCGCCCCAACTGA
Upstream 100 bases:
>100_bases GTGTGCCGGGTGGGGCAAGGCTAAATTGCTGGGAGATAGTGACCTCCTCCGTCAATGGAGGAAAAAGGAAGGCCCGCAGC AGGCGGGCGGGGAGGACGCC
Downstream 100 bases:
>100_bases CCGGCATCGCTCCGGTCAGCGGGGAGCGTCGACGCGCGTCTCAACAATTTCGCTGTTATGCCATGGGGTCGGCCGAAGGG TCGGCCCTTTTTTTATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKGAHGRFCEVSQLLAGDARGGQLADDLLNACFDHVLPEDGGEGSMKTLAHLMVTLDRFNAHVRREGGEGLFVGSPEEVA AWAEELTRQIWENRPN
Sequences:
>Translated_96_residues MKGAHGRFCEVSQLLAGDARGGQLADDLLNACFDHVLPEDGGEGSMKTLAHLMVTLDRFNAHVRREGGEGLFVGSPEEVA AWAEELTRQIWENRPN >Mature_96_residues MKGAHGRFCEVSQLLAGDARGGQLADDLLNACFDHVLPEDGGEGSMKTLAHLMVTLDRFNAHVRREGGEGLFVGSPEEVA AWAEELTRQIWENRPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10504; Mature: 10504
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGAHGRFCEVSQLLAGDARGGQLADDLLNACFDHVLPEDGGEGSMKTLAHLMVTLDRFN CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH AHVRREGGEGLFVGSPEEVAAWAEELTRQIWENRPN HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKGAHGRFCEVSQLLAGDARGGQLADDLLNACFDHVLPEDGGEGSMKTLAHLMVTLDRFN CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH AHVRREGGEGLFVGSPEEVAAWAEELTRQIWENRPN HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA