| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ppk [H]
Identifier: 78221360
GI number: 78221360
Start: 160295
End: 162481
Strand: Reverse
Name: ppk [H]
Synonym: Gmet_0133
Alternate gene names: 78221360
Gene position: 162481-160295 (Counterclockwise)
Preceding gene: 78221361
Following gene: 78221356
Centisome position: 4.06
GC content: 67.08
Gene sequence:
>2187_bases ATGGCCCGCAAGCCCTCCTCCCCGAAGAGAACCGCCCCCGAAACAGCGGCGGGCGGGGAGTGGTCGGTCTGCGACCTGGC CGCCCCCGAGCTCTACCTGAACCGGGAGCTCACCTGGCTCGCGTTCAACCGCCGGGTCCTCCACGAGGCCGAGGACGAGC GGACGCCGCTTCTGGAGCGGGTCAAGTTTGCCGCCATCGTCAGCAGCAACCTGGACGAGTTTTTCATGAAGCGGATCGGC GGCCTCAAGCAGCAGGTGGGGGCGGGCATCCAGAACCTGACCGTGGACGGCCGCACCCCCCGGCAGCAGATCGAGGAGTG CTACGCCGTGGTGCGGGAACTGGGGGAGCGGAAGCGGCTCCTTTTCGGCGAGCTCCTGACGCTCCTGCGGTCGGCCGGCA TCCAGATCCTCGGCTACAGCGAGATCCCGGCCCGGGAGCGGAAAGGGCTCCGCGACTATTACATCCGGAACATCTTTCCC CTGGTCACCCCCCAGTCCATCGACCCCGCCCACCCCTTCCCCTTCATCTCCAACCTCTCCCTGAACCTGCTGGTGACGCT CCGCTACCCCCGGGAGCGGGAGACCTCCCTGGCCCGGGTCAAGGTGCCGGTGGGGACCGGGATTCCCCGTTTCCTCCGGG TGGGTGACAAGGACCGGTTCGTCCCCCTGGAGGAGGTGATGCAGCACAACCTGGACCTCCTCTTCCCGGAGATGGAGGTG GTGGCCTGCGAGTTCTTCCGGGTCACCCGCAACGCCAATACCGAGCGGAACGAGGAGCAGGCCGACGACCTCCTCTCCAT GATCGAGTCGGAACTCCAAGACCGGCGCTTCGCTCCCATCGTGCGGCTGGAGGTTGTGGCCGGCATGGGGGCGGTGCACC GGGGGATGCTCGCCGCGGAGCTGGAACTGAACGAGGCCGCCGACGTCTTCGAGGTGGAGGGGATGCTGGCCCTGCGGGAC CTGTTCGAGATCGCCGGCCTCGGCTACCCGGAGCTCCACGACCCGTCCCACCACCCGGTCGACCACCCCCGCCTCATGAC CGACCGGAACATCTTTCACGTGATCCGGGACGCCGGCGCCATTCTCCTCCAGCACCCCTACGACTCCTTCGCCACCTCGG TGGAGCGCTTCCTCTTCGAGGCAAGCGAGGATCCCAAGGTGCGGGCCATCAAGATGACCCTCTACCGGACCGCCTCCGAC AGCCGGATCATCGATTGCCTGGTGAACGCGGCGAGTAACGGTAAGCAGGTGGCGGTGGCGGTGGAGTTGAAGGCCCGCTT CGACGAGGCGGCCAACATTCGGCTTGCGGAGCGGATGGAGGAGGCGGGGATCCACGTCACCTACGGCGTGGTGGGGCTCA AGACCCACTGCAAGGTGATCCTCGTGGTGCGGCAGGACTACGATGGGCTGCGGCGCTACGTCCACATCGGCACCGGCAAC TACCATCCCGGCACCGCCCGGCTCTACTCCGACCTGGGGCTCCTCACCAGCGACGAGGCGATTGGCCAGGACGCCACCGA GCTTTTCAACTACCTCACCACCGGCTACACCCCCCGGCGCAACTATCAGAAACTGCTGCCGGCGCCGAAGCACCTGAAGC GGGCGCTCCTGGCCAGGATCGAGCGGGAGGCGGAACTCCACTCGGAGAAGACGCCGGGGCTCATCCAGTTCAAAATGAAC GCCCTGGAAGACGCCGACATCGTGGCAGCCCTCTACCGTTCGGCCCGGAAGGGGGTGCGGATCGACCTCCTCATCCGGGA CAGCTGCCGCCTGCGCCCCGGCGTTCCGGGGCTCTCGGAGACGGTGCGGGTGGTGAGCGTGGTGGGACGGTTCCTGGAGC ACTCACGGATCTACTACTTCCGCAACAATGGTGACGAGGAGTACTACATCGGTTCCGCCGACGCCATGAAGCGGAACCTG GAATACCGGGTCGAGGTCCTCGCACCGGTGGAGGCCCCGGACCTGCGGAAGGAACTCCGAGCCATGCTCGACGCGCAACT CGGCGACCGGCGGAGCGCCTGGGAGATGCAGCCCGACGGCAGCTCCGTGCAGCGGATGCCGGGGGAAGGGGACGACCCGA GGGGAAGCCACGAGATCCTCATCGCCCTGGCCGAAAAACGCCGCAAGGCCGGTGCGCGCCTCAAAAAGAAAAAGGCCAGG GGAGTTGTCCGGCGCCCTGTCCGGTAA
Upstream 100 bases:
>100_bases GAACTGGAATGGGTCTTCGGCTACCCCTTCGCCCTCACGCTGATCATCCTCTCGGCCGTGCTCCCCCTCTACGTCTTCAA GAAGAAGGGGTGGCTGTAAC
Downstream 100 bases:
>100_bases CTCCCTCGGGCCTGCGATAATCAGAACAAGCATTTGAAACACAGAGCAACCGTGTTCTCAGTCAACAAATTAGTGCAGAA GTGGAGTGAATTTCGAGTGA
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 728; Mature: 727
Protein sequence:
>728_residues MARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLERVKFAAIVSSNLDEFFMKRIG GLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRLLFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFP LVTPQSIDPAHPFPFISNLSLNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAELELNEAADVFEVEGMLALRD LFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGAILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASD SRIIDCLVNAASNGKQVAVAVELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARIEREAELHSEKTPGLIQFKMN ALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSETVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNL EYRVEVLAPVEAPDLRKELRAMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR GVVRRPVR
Sequences:
>Translated_728_residues MARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLERVKFAAIVSSNLDEFFMKRIG GLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRLLFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFP LVTPQSIDPAHPFPFISNLSLNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAELELNEAADVFEVEGMLALRD LFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGAILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASD SRIIDCLVNAASNGKQVAVAVELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARIEREAELHSEKTPGLIQFKMN ALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSETVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNL EYRVEVLAPVEAPDLRKELRAMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR GVVRRPVR >Mature_727_residues ARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLERVKFAAIVSSNLDEFFMKRIGG LKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRLLFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFPL VTPQSIDPAHPFPFISNLSLNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEVV ACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAELELNEAADVFEVEGMLALRDL FEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGAILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASDS RIIDCLVNAASNGKQVAVAVELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGNY HPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARIEREAELHSEKTPGLIQFKMNA LEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSETVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNLE YRVEVLAPVEAPDLRKELRAMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKARG VVRRPVR
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=664, Percent_Identity=32.5301204819277, Blast_Score=338, Evalue=9e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 82397; Mature: 82266
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLER CCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHCCCCEEEEEHHHHHHHHCCCCCCHHHHH VKFAAIVSSNLDEFFMKRIGGLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRL HHHHHHHHCCHHHHHHHHHCCHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH LFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFPLVTPQSIDPAHPFPFISNLS HHHHHHHHHHHCCCEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV EEEEEEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHCCCCEECCCHHH VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAE HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCEEEE LELNEAADVFEVEGMLALRDLFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGA EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCE ILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASDSRIIDCLVNAASNGKQVAVA EEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEE VELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN EEEEHHCCHHCCHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCHHHEEEECCCC YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARI CCCCHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHH EREAELHSEKTPGLIQFKMNALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSE HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH TVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNLEYRVEVLAPVEAPDLRKELR HHHHHHHHHHHHHCCEEEEEECCCCCEEEECCHHHHHCCCCEEEEEEECCCCHHHHHHHH AMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHC GVVRRPVR CCCCCCCC >Mature Secondary Structure ARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLER CCCCCCCCCCCCCCCCCCCCCEEECCCCCHHCCCCEEEEEHHHHHHHHCCCCCCHHHHH VKFAAIVSSNLDEFFMKRIGGLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRL HHHHHHHHCCHHHHHHHHHCCHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH LFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFPLVTPQSIDPAHPFPFISNLS HHHHHHHHHHHCCCEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV EEEEEEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHCCCCEECCCHHH VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAE HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCEEEE LELNEAADVFEVEGMLALRDLFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGA EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCE ILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASDSRIIDCLVNAASNGKQVAVA EEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEE VELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN EEEEHHCCHHCCHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCHHHEEEECCCC YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARI CCCCHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHH EREAELHSEKTPGLIQFKMNALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSE HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH TVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNLEYRVEVLAPVEAPDLRKELR HHHHHHHHHHHHHCCEEEEEECCCCCEEEECCHHHHHCCCCEEEEEEECCCCHHHHHHHH AMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHC GVVRRPVR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12240834 [H]