Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is ppk [H]

Identifier: 78221360

GI number: 78221360

Start: 160295

End: 162481

Strand: Reverse

Name: ppk [H]

Synonym: Gmet_0133

Alternate gene names: 78221360

Gene position: 162481-160295 (Counterclockwise)

Preceding gene: 78221361

Following gene: 78221356

Centisome position: 4.06

GC content: 67.08

Gene sequence:

>2187_bases
ATGGCCCGCAAGCCCTCCTCCCCGAAGAGAACCGCCCCCGAAACAGCGGCGGGCGGGGAGTGGTCGGTCTGCGACCTGGC
CGCCCCCGAGCTCTACCTGAACCGGGAGCTCACCTGGCTCGCGTTCAACCGCCGGGTCCTCCACGAGGCCGAGGACGAGC
GGACGCCGCTTCTGGAGCGGGTCAAGTTTGCCGCCATCGTCAGCAGCAACCTGGACGAGTTTTTCATGAAGCGGATCGGC
GGCCTCAAGCAGCAGGTGGGGGCGGGCATCCAGAACCTGACCGTGGACGGCCGCACCCCCCGGCAGCAGATCGAGGAGTG
CTACGCCGTGGTGCGGGAACTGGGGGAGCGGAAGCGGCTCCTTTTCGGCGAGCTCCTGACGCTCCTGCGGTCGGCCGGCA
TCCAGATCCTCGGCTACAGCGAGATCCCGGCCCGGGAGCGGAAAGGGCTCCGCGACTATTACATCCGGAACATCTTTCCC
CTGGTCACCCCCCAGTCCATCGACCCCGCCCACCCCTTCCCCTTCATCTCCAACCTCTCCCTGAACCTGCTGGTGACGCT
CCGCTACCCCCGGGAGCGGGAGACCTCCCTGGCCCGGGTCAAGGTGCCGGTGGGGACCGGGATTCCCCGTTTCCTCCGGG
TGGGTGACAAGGACCGGTTCGTCCCCCTGGAGGAGGTGATGCAGCACAACCTGGACCTCCTCTTCCCGGAGATGGAGGTG
GTGGCCTGCGAGTTCTTCCGGGTCACCCGCAACGCCAATACCGAGCGGAACGAGGAGCAGGCCGACGACCTCCTCTCCAT
GATCGAGTCGGAACTCCAAGACCGGCGCTTCGCTCCCATCGTGCGGCTGGAGGTTGTGGCCGGCATGGGGGCGGTGCACC
GGGGGATGCTCGCCGCGGAGCTGGAACTGAACGAGGCCGCCGACGTCTTCGAGGTGGAGGGGATGCTGGCCCTGCGGGAC
CTGTTCGAGATCGCCGGCCTCGGCTACCCGGAGCTCCACGACCCGTCCCACCACCCGGTCGACCACCCCCGCCTCATGAC
CGACCGGAACATCTTTCACGTGATCCGGGACGCCGGCGCCATTCTCCTCCAGCACCCCTACGACTCCTTCGCCACCTCGG
TGGAGCGCTTCCTCTTCGAGGCAAGCGAGGATCCCAAGGTGCGGGCCATCAAGATGACCCTCTACCGGACCGCCTCCGAC
AGCCGGATCATCGATTGCCTGGTGAACGCGGCGAGTAACGGTAAGCAGGTGGCGGTGGCGGTGGAGTTGAAGGCCCGCTT
CGACGAGGCGGCCAACATTCGGCTTGCGGAGCGGATGGAGGAGGCGGGGATCCACGTCACCTACGGCGTGGTGGGGCTCA
AGACCCACTGCAAGGTGATCCTCGTGGTGCGGCAGGACTACGATGGGCTGCGGCGCTACGTCCACATCGGCACCGGCAAC
TACCATCCCGGCACCGCCCGGCTCTACTCCGACCTGGGGCTCCTCACCAGCGACGAGGCGATTGGCCAGGACGCCACCGA
GCTTTTCAACTACCTCACCACCGGCTACACCCCCCGGCGCAACTATCAGAAACTGCTGCCGGCGCCGAAGCACCTGAAGC
GGGCGCTCCTGGCCAGGATCGAGCGGGAGGCGGAACTCCACTCGGAGAAGACGCCGGGGCTCATCCAGTTCAAAATGAAC
GCCCTGGAAGACGCCGACATCGTGGCAGCCCTCTACCGTTCGGCCCGGAAGGGGGTGCGGATCGACCTCCTCATCCGGGA
CAGCTGCCGCCTGCGCCCCGGCGTTCCGGGGCTCTCGGAGACGGTGCGGGTGGTGAGCGTGGTGGGACGGTTCCTGGAGC
ACTCACGGATCTACTACTTCCGCAACAATGGTGACGAGGAGTACTACATCGGTTCCGCCGACGCCATGAAGCGGAACCTG
GAATACCGGGTCGAGGTCCTCGCACCGGTGGAGGCCCCGGACCTGCGGAAGGAACTCCGAGCCATGCTCGACGCGCAACT
CGGCGACCGGCGGAGCGCCTGGGAGATGCAGCCCGACGGCAGCTCCGTGCAGCGGATGCCGGGGGAAGGGGACGACCCGA
GGGGAAGCCACGAGATCCTCATCGCCCTGGCCGAAAAACGCCGCAAGGCCGGTGCGCGCCTCAAAAAGAAAAAGGCCAGG
GGAGTTGTCCGGCGCCCTGTCCGGTAA

Upstream 100 bases:

>100_bases
GAACTGGAATGGGTCTTCGGCTACCCCTTCGCCCTCACGCTGATCATCCTCTCGGCCGTGCTCCCCCTCTACGTCTTCAA
GAAGAAGGGGTGGCTGTAAC

Downstream 100 bases:

>100_bases
CTCCCTCGGGCCTGCGATAATCAGAACAAGCATTTGAAACACAGAGCAACCGTGTTCTCAGTCAACAAATTAGTGCAGAA
GTGGAGTGAATTTCGAGTGA

Product: polyphosphate kinase

Products: NA

Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]

Number of amino acids: Translated: 728; Mature: 727

Protein sequence:

>728_residues
MARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLERVKFAAIVSSNLDEFFMKRIG
GLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRLLFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFP
LVTPQSIDPAHPFPFISNLSLNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV
VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAELELNEAADVFEVEGMLALRD
LFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGAILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASD
SRIIDCLVNAASNGKQVAVAVELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN
YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARIEREAELHSEKTPGLIQFKMN
ALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSETVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNL
EYRVEVLAPVEAPDLRKELRAMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR
GVVRRPVR

Sequences:

>Translated_728_residues
MARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLERVKFAAIVSSNLDEFFMKRIG
GLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRLLFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFP
LVTPQSIDPAHPFPFISNLSLNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV
VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAELELNEAADVFEVEGMLALRD
LFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGAILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASD
SRIIDCLVNAASNGKQVAVAVELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN
YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARIEREAELHSEKTPGLIQFKMN
ALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSETVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNL
EYRVEVLAPVEAPDLRKELRAMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR
GVVRRPVR
>Mature_727_residues
ARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLERVKFAAIVSSNLDEFFMKRIGG
LKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRLLFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFPL
VTPQSIDPAHPFPFISNLSLNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEVV
ACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAELELNEAADVFEVEGMLALRDL
FEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGAILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASDS
RIIDCLVNAASNGKQVAVAVELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGNY
HPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARIEREAELHSEKTPGLIQFKMNA
LEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSETVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNLE
YRVEVLAPVEAPDLRKELRAMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKARG
VVRRPVR

Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]

COG id: COG0855

COG function: function code P; Polyphosphate kinase

Gene ontology:

Cell location: Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyphosphate kinase family [H]

Homologues:

Organism=Escherichia coli, GI1788847, Length=664, Percent_Identity=32.5301204819277, Blast_Score=338, Evalue=9e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003414 [H]

Pfam domain/function: PF02503 PP_kinase [H]

EC number: =2.7.4.1 [H]

Molecular weight: Translated: 82397; Mature: 82266

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLER
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHCCCCEEEEEHHHHHHHHCCCCCCHHHHH
VKFAAIVSSNLDEFFMKRIGGLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRL
HHHHHHHHCCHHHHHHHHHCCHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFPLVTPQSIDPAHPFPFISNLS
HHHHHHHHHHHCCCEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV
EEEEEEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHCCCCEECCCHHH
VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCEEEE
LELNEAADVFEVEGMLALRDLFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGA
EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCE
ILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASDSRIIDCLVNAASNGKQVAVA
EEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEE
VELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN
EEEEHHCCHHCCHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCHHHEEEECCCC
YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARI
CCCCHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHH
EREAELHSEKTPGLIQFKMNALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSE
HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
TVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNLEYRVEVLAPVEAPDLRKELR
HHHHHHHHHHHHHCCEEEEEECCCCCEEEECCHHHHHCCCCEEEEEEECCCCHHHHHHHH
AMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR
HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHC
GVVRRPVR
CCCCCCCC
>Mature Secondary Structure 
ARKPSSPKRTAPETAAGGEWSVCDLAAPELYLNRELTWLAFNRRVLHEAEDERTPLLER
CCCCCCCCCCCCCCCCCCCCCEEECCCCCHHCCCCEEEEEHHHHHHHHCCCCCCHHHHH
VKFAAIVSSNLDEFFMKRIGGLKQQVGAGIQNLTVDGRTPRQQIEECYAVVRELGERKRL
HHHHHHHHCCHHHHHHHHHCCHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LFGELLTLLRSAGIQILGYSEIPARERKGLRDYYIRNIFPLVTPQSIDPAHPFPFISNLS
HHHHHHHHHHHCCCEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LNLLVTLRYPRERETSLARVKVPVGTGIPRFLRVGDKDRFVPLEEVMQHNLDLLFPEMEV
EEEEEEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHCCCCEECCCHHH
VACEFFRVTRNANTERNEEQADDLLSMIESELQDRRFAPIVRLEVVAGMGAVHRGMLAAE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCEEEE
LELNEAADVFEVEGMLALRDLFEIAGLGYPELHDPSHHPVDHPRLMTDRNIFHVIRDAGA
EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCE
ILLQHPYDSFATSVERFLFEASEDPKVRAIKMTLYRTASDSRIIDCLVNAASNGKQVAVA
EEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEE
VELKARFDEAANIRLAERMEEAGIHVTYGVVGLKTHCKVILVVRQDYDGLRRYVHIGTGN
EEEEHHCCHHCCHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCHHHEEEECCCC
YHPGTARLYSDLGLLTSDEAIGQDATELFNYLTTGYTPRRNYQKLLPAPKHLKRALLARI
CCCCHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHH
EREAELHSEKTPGLIQFKMNALEDADIVAALYRSARKGVRIDLLIRDSCRLRPGVPGLSE
HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
TVRVVSVVGRFLEHSRIYYFRNNGDEEYYIGSADAMKRNLEYRVEVLAPVEAPDLRKELR
HHHHHHHHHHHHHCCEEEEEECCCCCEEEECCHHHHHCCCCEEEEEEECCCCHHHHHHHH
AMLDAQLGDRRSAWEMQPDGSSVQRMPGEGDDPRGSHEILIALAEKRRKAGARLKKKKAR
HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHC
GVVRRPVR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]