| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221261
Identifier: 78221261
GI number: 78221261
Start: 41865
End: 44129
Strand: Direct
Name: 78221261
Synonym: Gmet_0033
Alternate gene names: NA
Gene position: 41865-44129 (Clockwise)
Preceding gene: 78221260
Following gene: 78221263
Centisome position: 1.05
GC content: 59.74
Gene sequence:
>2265_bases ATGGACCGGAGCGCGAACGAATGGGAGCACCTAGCCCCCATTCCCTTCGAGGAGTTCCTGAAGATTCTCGTGGCCAATCC CACGCGGGTCATCCGCAACGTTTTCCAGGTCTTCCATGACATGGTCATGAGCCACATCGACATCGGCGCCGACGAGTATC CCGACGACCCCGAATCGATCCATTTCATCCCCTATGACTGCCGTCGCCTCTTCGTGGAGGGGACCGACCATCCCTTCTTC GCCGACCGCCTCTTCGCCAACCGGTTCGTGGGGCTTGTGGAGGCCCTGAAACGGGGTTCCCTCCAGAACAAGATCTATGT TTTCGAGGGGCCGCCAGGAAGCGGCAAGAGCACCTTCCTCAACAACCTGCTCCTGAAGTTCGAGAACTACGTCAATACCG ACGCGGGAATACGCTACGAGGCGGTCTGGCGTTTGGACCGCCAGGCATTCGGGGGGTTCACCCGGCACGAGACAGCAGTT TTTCTCGACAAGCTTTCCAAGCTCCTGGAGGAGCACGACTTCAGTCAGGATGAGCTCCTGGCGGCGGAGCACGCCCTCCA TCCGGGGGATGACTACGTGGAGATCCCCTGCCCCTCCCACGACAATCCCCTCCTCGTGATCCCGAAGCAGCTCAGGCGCC AGTTCTTCGACGACCTGTTCAAGAACGACGAGATGAAGTGGCGTCTCTTCACCGAGAAGGAGTACGAGTGGCTCTTCCGC GACACCCCCTGCACCATCTGCAGCTCCCTCTACCAGGCGCTCCTGGCCCGGCTGAAAAGCCCGGCGGCGGTCCTCGGCAT GCTCCACGCCCGCCCCTACCGTTTCAACCGGCGCCTCGGCGAGGGGGTCAGCGTCTTCAACCCCGGCGACAAGCCGATGC GCAACAGCGTCTTCACCAACGAGATGCTCCAGAGCCGGATCAACGCCATTCTCAAGGACAGCAACCTGGTGAAGTACCTC TTCTCCGAGTATGCCAAGACCAACAACGGCATTTACTCCCTCATGGACATCAAAGGGCACAACACCGACCGGCTCATCGA GCTCCACAACATCGTGAGTGAAGGGGTACACAAGGTGGACGACCTGGAGGAGAACGTCGACTCCCTGTTCCTGGCCCTCA TGAACCCCGAGGACAAGAGCAACATCGAGGGGTATCAGTCGTTCCTGGACCGGATCGAGTACATCAAGATACCCTACGTG CTGGACCTCAACACCGAGGTGGAGATCTACCGTAACACCTTCGGCAAGCACATCGACCACAGCTTCCTGCCCCGGGTCCT CCACAACTTCGCCCGGATCATCATCGCGTCGCGCATGGACGAACGCTCCTTCGCCATGCACGAGTGGATCCCCGAGCCCC ACCGCTACAGCACCTTCTGCGATTTCAACCTCCAGCTTCTCAAGATGGAGATCTATACCGGGTTCATCCCCCCCTGGCTT TCGGAGGAGGACCGCAAGCGCCTCACTGCCAAGCGGCGGCGCCAGATCATCTCCGAGGGGGAGAACGAGGGGCACAGGGG CTTTTCGGGGCGCGACGCCCTGAAGATCTTCGGCGAGTTCTATTCCACCTTTGCCCGCAAGGACAAGCTGATCACCATGA CCATCCTCATCGCCTTCTTCACCAAGGTCCACCCGGAGCTGGGGAAGCAGCTCCCCAACGGCTTCCTCGACGCCCTCAGG GGACTCTACAATTTCACCATTCTCCAGGAGGTGAAGGAATCTCTCTACTACTACAACGAGGAGCAGATCTCCCGGGACGT TCAGAACTACCTCTTTGCCATCAACTTCGAGCCCGAGGTGGACGAAACCTGTACCTGGACCAGGGACAAGCTCCACATCA GCGAGTCATTCTTCGAGGGGATCGAGAGCCGTCTTCTGGGGGCCAATGGCCGCGACCGGGCGCAGCGTCTCGCGTTCAGG AAAGAGATCCAGCGGGAGTACGCCGCCCACACCCTGGCCCAGGAGATCCTCTTCGAGGGGAAGGGAATCACCGCTACCCG TCTCTACCGGACTTTGTTCGACAAATATGTCTTCAACCTGAAGGAGAAGGCCCTGGACCCCTTCCTGGAGAACGTCAACT TCCGCCGCGCCATCAAGGATTTCGGGAAAGAGGAGTTCAAGACCTACGACAAGCGGATCCGCGACGACGTCACCTTCCTC GTCAACAACCTCTGCAGCAAGTTCCGCTACACCAAGAACGGCGCCAAGGAGGTCTGCATCTACGCCATCGACAACGACCT GGCCAAGGCGTACGGCAGCACCTGA
Upstream 100 bases:
>100_bases TGGCGTCGGCACGTCTACACCATGGAAAACCGGACACTTTCCAAGACTCTCGTGTGAGCGGAACAGACCCATGGACACCA TAAGCAGGGCATTACATCAC
Downstream 100 bases:
>100_bases TGAACGGCTAGCCCCTTCTTCAGCCGAAGGGGATCAACTCGATGATGGTAACCTCGGGGGGGGCCAGGAAACGGAGCGGC GGACCCCAGGTGCCGCTGCC
Product: putative serine protein kinase, PrkA
Products: NA
Alternate protein names: Sensory Box Histidine Kinase/Response Regulator Protein; AAA Family ATPase
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MDRSANEWEHLAPIPFEEFLKILVANPTRVIRNVFQVFHDMVMSHIDIGADEYPDDPESIHFIPYDCRRLFVEGTDHPFF ADRLFANRFVGLVEALKRGSLQNKIYVFEGPPGSGKSTFLNNLLLKFENYVNTDAGIRYEAVWRLDRQAFGGFTRHETAV FLDKLSKLLEEHDFSQDELLAAEHALHPGDDYVEIPCPSHDNPLLVIPKQLRRQFFDDLFKNDEMKWRLFTEKEYEWLFR DTPCTICSSLYQALLARLKSPAAVLGMLHARPYRFNRRLGEGVSVFNPGDKPMRNSVFTNEMLQSRINAILKDSNLVKYL FSEYAKTNNGIYSLMDIKGHNTDRLIELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIEGYQSFLDRIEYIKIPYV LDLNTEVEIYRNTFGKHIDHSFLPRVLHNFARIIIASRMDERSFAMHEWIPEPHRYSTFCDFNLQLLKMEIYTGFIPPWL SEEDRKRLTAKRRRQIISEGENEGHRGFSGRDALKIFGEFYSTFARKDKLITMTILIAFFTKVHPELGKQLPNGFLDALR GLYNFTILQEVKESLYYYNEEQISRDVQNYLFAINFEPEVDETCTWTRDKLHISESFFEGIESRLLGANGRDRAQRLAFR KEIQREYAAHTLAQEILFEGKGITATRLYRTLFDKYVFNLKEKALDPFLENVNFRRAIKDFGKEEFKTYDKRIRDDVTFL VNNLCSKFRYTKNGAKEVCIYAIDNDLAKAYGST
Sequences:
>Translated_754_residues MDRSANEWEHLAPIPFEEFLKILVANPTRVIRNVFQVFHDMVMSHIDIGADEYPDDPESIHFIPYDCRRLFVEGTDHPFF ADRLFANRFVGLVEALKRGSLQNKIYVFEGPPGSGKSTFLNNLLLKFENYVNTDAGIRYEAVWRLDRQAFGGFTRHETAV FLDKLSKLLEEHDFSQDELLAAEHALHPGDDYVEIPCPSHDNPLLVIPKQLRRQFFDDLFKNDEMKWRLFTEKEYEWLFR DTPCTICSSLYQALLARLKSPAAVLGMLHARPYRFNRRLGEGVSVFNPGDKPMRNSVFTNEMLQSRINAILKDSNLVKYL FSEYAKTNNGIYSLMDIKGHNTDRLIELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIEGYQSFLDRIEYIKIPYV LDLNTEVEIYRNTFGKHIDHSFLPRVLHNFARIIIASRMDERSFAMHEWIPEPHRYSTFCDFNLQLLKMEIYTGFIPPWL SEEDRKRLTAKRRRQIISEGENEGHRGFSGRDALKIFGEFYSTFARKDKLITMTILIAFFTKVHPELGKQLPNGFLDALR GLYNFTILQEVKESLYYYNEEQISRDVQNYLFAINFEPEVDETCTWTRDKLHISESFFEGIESRLLGANGRDRAQRLAFR KEIQREYAAHTLAQEILFEGKGITATRLYRTLFDKYVFNLKEKALDPFLENVNFRRAIKDFGKEEFKTYDKRIRDDVTFL VNNLCSKFRYTKNGAKEVCIYAIDNDLAKAYGST >Mature_754_residues MDRSANEWEHLAPIPFEEFLKILVANPTRVIRNVFQVFHDMVMSHIDIGADEYPDDPESIHFIPYDCRRLFVEGTDHPFF ADRLFANRFVGLVEALKRGSLQNKIYVFEGPPGSGKSTFLNNLLLKFENYVNTDAGIRYEAVWRLDRQAFGGFTRHETAV FLDKLSKLLEEHDFSQDELLAAEHALHPGDDYVEIPCPSHDNPLLVIPKQLRRQFFDDLFKNDEMKWRLFTEKEYEWLFR DTPCTICSSLYQALLARLKSPAAVLGMLHARPYRFNRRLGEGVSVFNPGDKPMRNSVFTNEMLQSRINAILKDSNLVKYL FSEYAKTNNGIYSLMDIKGHNTDRLIELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIEGYQSFLDRIEYIKIPYV LDLNTEVEIYRNTFGKHIDHSFLPRVLHNFARIIIASRMDERSFAMHEWIPEPHRYSTFCDFNLQLLKMEIYTGFIPPWL SEEDRKRLTAKRRRQIISEGENEGHRGFSGRDALKIFGEFYSTFARKDKLITMTILIAFFTKVHPELGKQLPNGFLDALR GLYNFTILQEVKESLYYYNEEQISRDVQNYLFAINFEPEVDETCTWTRDKLHISESFFEGIESRLLGANGRDRAQRLAFR KEIQREYAAHTLAQEILFEGKGITATRLYRTLFDKYVFNLKEKALDPFLENVNFRRAIKDFGKEEFKTYDKRIRDDVTFL VNNLCSKFRYTKNGAKEVCIYAIDNDLAKAYGST
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88223; Mature: 88223
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRSANEWEHLAPIPFEEFLKILVANPTRVIRNVFQVFHDMVMSHIDIGADEYPDDPESI CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE HFIPYDCRRLFVEGTDHPFFADRLFANRFVGLVEALKRGSLQNKIYVFEGPPGSGKSTFL EECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH NNLLLKFENYVNTDAGIRYEAVWRLDRQAFGGFTRHETAVFLDKLSKLLEEHDFSQDELL HHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH AAEHALHPGDDYVEIPCPSHDNPLLVIPKQLRRQFFDDLFKNDEMKWRLFTEKEYEWLFR HHHHCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHC DTPCTICSSLYQALLARLKSPAAVLGMLHARPYRFNRRLGEGVSVFNPGDKPMRNSVFTN CCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCEECCCCCCHHHHHHHH EMLQSRINAILKDSNLVKYLFSEYAKTNNGIYSLMDIKGHNTDRLIELHNIVSEGVHKVD HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH DLEENVDSLFLALMNPEDKSNIEGYQSFLDRIEYIKIPYVLDLNTEVEIYRNTFGKHIDH HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCEEEECCCCHHHHHHHHHHHCCH SFLPRVLHNFARIIIASRMDERSFAMHEWIPEPHRYSTFCDFNLQLLKMEIYTGFIPPWL HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEECCCCEEEEEEHHHCCCCCCC SEEDRKRLTAKRRRQIISEGENEGHRGFSGRDALKIFGEFYSTFARKDKLITMTILIAFF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TKVHPELGKQLPNGFLDALRGLYNFTILQEVKESLYYYNEEQISRDVQNYLFAINFEPEV HHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCC DETCTWTRDKLHISESFFEGIESRLLGANGRDRAQRLAFRKEIQREYAAHTLAQEILFEG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGITATRLYRTLFDKYVFNLKEKALDPFLENVNFRRAIKDFGKEEFKTYDKRIRDDVTFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH VNNLCSKFRYTKNGAKEVCIYAIDNDLAKAYGST HHHHHHHHHCCCCCCCEEEEEEECHHHHHHCCCC >Mature Secondary Structure MDRSANEWEHLAPIPFEEFLKILVANPTRVIRNVFQVFHDMVMSHIDIGADEYPDDPESI CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE HFIPYDCRRLFVEGTDHPFFADRLFANRFVGLVEALKRGSLQNKIYVFEGPPGSGKSTFL EECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH NNLLLKFENYVNTDAGIRYEAVWRLDRQAFGGFTRHETAVFLDKLSKLLEEHDFSQDELL HHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH AAEHALHPGDDYVEIPCPSHDNPLLVIPKQLRRQFFDDLFKNDEMKWRLFTEKEYEWLFR HHHHCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHC DTPCTICSSLYQALLARLKSPAAVLGMLHARPYRFNRRLGEGVSVFNPGDKPMRNSVFTN CCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCEECCCCCCHHHHHHHH EMLQSRINAILKDSNLVKYLFSEYAKTNNGIYSLMDIKGHNTDRLIELHNIVSEGVHKVD HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH DLEENVDSLFLALMNPEDKSNIEGYQSFLDRIEYIKIPYVLDLNTEVEIYRNTFGKHIDH HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCEEEECCCCHHHHHHHHHHHCCH SFLPRVLHNFARIIIASRMDERSFAMHEWIPEPHRYSTFCDFNLQLLKMEIYTGFIPPWL HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEECCCCEEEEEEHHHCCCCCCC SEEDRKRLTAKRRRQIISEGENEGHRGFSGRDALKIFGEFYSTFARKDKLITMTILIAFF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TKVHPELGKQLPNGFLDALRGLYNFTILQEVKESLYYYNEEQISRDVQNYLFAINFEPEV HHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCC DETCTWTRDKLHISESFFEGIESRLLGANGRDRAQRLAFRKEIQREYAAHTLAQEILFEG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGITATRLYRTLFDKYVFNLKEKALDPFLENVNFRRAIKDFGKEEFKTYDKRIRDDVTFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH VNNLCSKFRYTKNGAKEVCIYAIDNDLAKAYGST HHHHHHHHHCCCCCCCEEEEEEECHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA