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The map label for this gene is spoVR [H]

Identifier: 78221260

GI number: 78221260

Start: 40151

End: 41821

Strand: Direct

Name: spoVR [H]

Synonym: Gmet_0032

Alternate gene names: 78221260

Gene position: 40151-41821 (Clockwise)

Preceding gene: 78221259

Following gene: 78221261

Centisome position: 1.0

GC content: 60.86

Gene sequence:

>1671_bases
ATGCAAGGGCGCAGCAAGCGGCGCCCCTCCATAGACCTGAATATGGAACTCATCGATCAACATACCAAGAGCATCATGGA
AGGGTGCAAGGAGCGCGCTCGCGACGCCGGCTTGCGCTTCTCCGACGAGACCCTGGAGTACATCGTCACCAACCGGGACA
TGCTGGAGCTTCACCCGAAGGTGATGATCCCGACCCTCTACGACTACTGGGTCCATGACGTGGAACTGCTCAGGGAAAAG
GGAAAGTACGAACTCTACCCCAGCAACCCCTACGAGACGGTCATCAACACCCGCCCTCCCATCTCCTTTTACAACGACAA
CAATCCCGACTGGCTGAACGTGATGATCTTCTACCACGTCCTGGCCCACATCGACTTCTTCCAGAACAACCTCTACTTCC
GCCATACCTGGGAATACGACCTGACCGGGAAGGCCCTGGCCGACAAGCGGCTCATCGCGCGGTTGCGCTCCGAGCACGGC
CGGTGGGTCGACTACGTCATCGAGTTCGCCCGCGCCATTGACAATCTGGTGGGGTACTTTGACGGGCTCTCCCACCTCTT
CCGGCAGGACCGCCCCCCCTTTTCCAAGCGGCTTGACTACTACTTCGACGTCTTCCTCCAGGAGGTCAAGGGGGTGAAGA
CCGCCGAGTACGTGAAGGAGATCGAGCGCTACAACCGCTGCAGGCGGGAAGTGGGTGAGCTGTGCGAGGAGAGCTTCTTT
GCCGACGTGGTGGCGAAGAATCCGGAGTTCGAGGCGTTCTATCTCAAGGGAACCCGGGAGAAGAAGGAGGAGCGGCTCGA
TCTTCTCCAGTTCCTCATGGAGCATTCGGAGTTCCTGAACCAGGACGAAAACCTGTGGATGAAGTCGGTGCTGGAGGTGA
TCCGCTCCACATCGGTCTACTTCCAGCCCCAGATCCGGACCAAGATCATGAACGAGGGGTGGGCCAGCTACTGGCACGAG
ACCCTCTTTCTCACCGACGACCGGATCAAGGGGCACGAGGTGGACTTCGCACGGGTCCACTCGGGGGTCACCTGCCTCCA
CCGGGTGGGGCTCAATCCCTATGCCATCGGAATGCGGCTCTTCCAGCAGATCGAGGAGGGGGGCGATCAGGGGCGGCTCT
CCCTGGAGTACCAGCGGCTTGCCGACAGCCATGCCCGGAAGGAGTTCGACCGGGCCACCGGCACGGGGCGCGACGTTATC
TTCGCGGTGCGGGAAAACCTCTGCGACTTCACCTTCATCAACACCTACGTGGACCAGGACTTCGTCAACCGCCACAACCT
CTTCGTGGTGGGGAAGCGCCTGAATGCGGAGCGGACGGCGTGGCAGTACTACGTCAAGAGCCGTAAGGCCGAGGAATACC
GGGGCATGCTCCTGGAATCCCTCTACCATCCACCCCGCATTGAGGTGGACCGGGCAAAAGGGGGGGGGAAGACCCTCTAC
CTCAACCATCTCTTCGAGGGGAAACCGCTGATCCCGGACTTTATCGCCAACACCATGCTGGGGATAGAATTCCTCTGGGG
GGGACCGGTGAAGCTGGAGACCAGCGAAGTGGCGTCGGCTCCTCCCCGGGAAGCGGGCGCGCCCCGCGGCGAAGGGGAAG
CGCCGAAGATCCACTGGCGTCGGCACGTCTACACCATGGAAAACCGGACACTTTCCAAGACTCTCGTGTGA

Upstream 100 bases:

>100_bases
GGGAGAGGATGCCGACGAGACGCGGATTATCGATGGGATAAAACGTTTGATTTCTTAGGTGTCATAGGGTAGGGGCGCTG
CTTGCCGCGCCCGTCACCGG

Downstream 100 bases:

>100_bases
GCGGAACAGACCCATGGACACCATAAGCAGGGCATTACATCACATGGACCGGAGCGCGAACGAATGGGAGCACCTAGCCC
CCATTCCCTTCGAGGAGTTC

Product: SpoVR-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MQGRSKRRPSIDLNMELIDQHTKSIMEGCKERARDAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDVELLREK
GKYELYPSNPYETVINTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYFRHTWEYDLTGKALADKRLIARLRSEHG
RWVDYVIEFARAIDNLVGYFDGLSHLFRQDRPPFSKRLDYYFDVFLQEVKGVKTAEYVKEIERYNRCRREVGELCEESFF
ADVVAKNPEFEAFYLKGTREKKEERLDLLQFLMEHSEFLNQDENLWMKSVLEVIRSTSVYFQPQIRTKIMNEGWASYWHE
TLFLTDDRIKGHEVDFARVHSGVTCLHRVGLNPYAIGMRLFQQIEEGGDQGRLSLEYQRLADSHARKEFDRATGTGRDVI
FAVRENLCDFTFINTYVDQDFVNRHNLFVVGKRLNAERTAWQYYVKSRKAEEYRGMLLESLYHPPRIEVDRAKGGGKTLY
LNHLFEGKPLIPDFIANTMLGIEFLWGGPVKLETSEVASAPPREAGAPRGEGEAPKIHWRRHVYTMENRTLSKTLV

Sequences:

>Translated_556_residues
MQGRSKRRPSIDLNMELIDQHTKSIMEGCKERARDAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDVELLREK
GKYELYPSNPYETVINTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYFRHTWEYDLTGKALADKRLIARLRSEHG
RWVDYVIEFARAIDNLVGYFDGLSHLFRQDRPPFSKRLDYYFDVFLQEVKGVKTAEYVKEIERYNRCRREVGELCEESFF
ADVVAKNPEFEAFYLKGTREKKEERLDLLQFLMEHSEFLNQDENLWMKSVLEVIRSTSVYFQPQIRTKIMNEGWASYWHE
TLFLTDDRIKGHEVDFARVHSGVTCLHRVGLNPYAIGMRLFQQIEEGGDQGRLSLEYQRLADSHARKEFDRATGTGRDVI
FAVRENLCDFTFINTYVDQDFVNRHNLFVVGKRLNAERTAWQYYVKSRKAEEYRGMLLESLYHPPRIEVDRAKGGGKTLY
LNHLFEGKPLIPDFIANTMLGIEFLWGGPVKLETSEVASAPPREAGAPRGEGEAPKIHWRRHVYTMENRTLSKTLV
>Mature_556_residues
MQGRSKRRPSIDLNMELIDQHTKSIMEGCKERARDAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDVELLREK
GKYELYPSNPYETVINTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYFRHTWEYDLTGKALADKRLIARLRSEHG
RWVDYVIEFARAIDNLVGYFDGLSHLFRQDRPPFSKRLDYYFDVFLQEVKGVKTAEYVKEIERYNRCRREVGELCEESFF
ADVVAKNPEFEAFYLKGTREKKEERLDLLQFLMEHSEFLNQDENLWMKSVLEVIRSTSVYFQPQIRTKIMNEGWASYWHE
TLFLTDDRIKGHEVDFARVHSGVTCLHRVGLNPYAIGMRLFQQIEEGGDQGRLSLEYQRLADSHARKEFDRATGTGRDVI
FAVRENLCDFTFINTYVDQDFVNRHNLFVVGKRLNAERTAWQYYVKSRKAEEYRGMLLESLYHPPRIEVDRAKGGGKTLY
LNHLFEGKPLIPDFIANTMLGIEFLWGGPVKLETSEVASAPPREAGAPRGEGEAPKIHWRRHVYTMENRTLSKTLV

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=339, Percent_Identity=25.9587020648968, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 65544; Mature: 65544

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRSKRRPSIDLNMELIDQHTKSIMEGCKERARDAGLRFSDETLEYIVTNRDMLELHPK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCC
VMIPTLYDYWVHDVELLREKGKYELYPSNPYETVINTRPPISFYNDNNPDWLNVMIFYHV
EECCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
LAHIDFFQNNLYFRHTWEYDLTGKALADKRLIARLRSEHGRWVDYVIEFARAIDNLVGYF
HHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DGLSHLFRQDRPPFSKRLDYYFDVFLQEVKGVKTAEYVKEIERYNRCRREVGELCEESFF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADVVAKNPEFEAFYLKGTREKKEERLDLLQFLMEHSEFLNQDENLWMKSVLEVIRSTSVY
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEE
FQPQIRTKIMNEGWASYWHETLFLTDDRIKGHEVDFARVHSGVTCLHRVGLNPYAIGMRL
ECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
FQQIEEGGDQGRLSLEYQRLADSHARKEFDRATGTGRDVIFAVRENLCDFTFINTYVDQD
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHH
FVNRHNLFVVGKRLNAERTAWQYYVKSRKAEEYRGMLLESLYHPPRIEVDRAKGGGKTLY
HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEE
LNHLFEGKPLIPDFIANTMLGIEFLWGGPVKLETSEVASAPPREAGAPRGEGEAPKIHWR
EEEECCCCCCCHHHHHHHHHHHHEEECCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEHH
RHVYTMENRTLSKTLV
HEEEEECCCCHHHHCC
>Mature Secondary Structure
MQGRSKRRPSIDLNMELIDQHTKSIMEGCKERARDAGLRFSDETLEYIVTNRDMLELHPK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCC
VMIPTLYDYWVHDVELLREKGKYELYPSNPYETVINTRPPISFYNDNNPDWLNVMIFYHV
EECCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
LAHIDFFQNNLYFRHTWEYDLTGKALADKRLIARLRSEHGRWVDYVIEFARAIDNLVGYF
HHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DGLSHLFRQDRPPFSKRLDYYFDVFLQEVKGVKTAEYVKEIERYNRCRREVGELCEESFF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADVVAKNPEFEAFYLKGTREKKEERLDLLQFLMEHSEFLNQDENLWMKSVLEVIRSTSVY
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEE
FQPQIRTKIMNEGWASYWHETLFLTDDRIKGHEVDFARVHSGVTCLHRVGLNPYAIGMRL
ECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
FQQIEEGGDQGRLSLEYQRLADSHARKEFDRATGTGRDVIFAVRENLCDFTFINTYVDQD
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHH
FVNRHNLFVVGKRLNAERTAWQYYVKSRKAEEYRGMLLESLYHPPRIEVDRAKGGGKTLY
HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEE
LNHLFEGKPLIPDFIANTMLGIEFLWGGPVKLETSEVASAPPREAGAPRGEGEAPKIHWR
EEEECCCCCCCHHHHHHHHHHHHEEECCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEHH
RHVYTMENRTLSKTLV
HEEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]