| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221263
Identifier: 78221263
GI number: 78221263
Start: 45698
End: 46594
Strand: Direct
Name: 78221263
Synonym: Gmet_0035
Alternate gene names: NA
Gene position: 45698-46594 (Clockwise)
Preceding gene: 78221261
Following gene: 78221268
Centisome position: 1.14
GC content: 57.3
Gene sequence:
>897_bases ATGAATGTCGACAACCGGATTGCCAGGGCCGAAGAGTTGCTGGCCACGATTCCCGAACTTCCAACCGTCCCGACGGTTAT TGTCAGCATTGTACAAAAACTTCACGACCCCGAGGTGGATATTCAGGAAATTCTCGACCTTCTCCTCATGGACCAGGTGC TGACGATCAGGCTCCTGCGGCTGGCCAATTCTCCCTATTACAGCACCATGAAAAACATCGTCTCCCTGAAAGAGGCGATC CTATACCTGGGGCTGGATCACATCAAAGAGGTCATCTACACCTGCTCGATCGTCGACCTGTTCAGGGAAGGAAAGGGGGT CATCGATCGGGCAACACTCTGGTCCCACGCCCTTGGCGTCGCCCTGGTCTCCAAGAGGATCGCCAAAAAGGTCGGCTACG CCGAACCGGATAATGCGTATATTGCCGGGTTGCTCCACGACATCGGCGAGGTATTCCTCAACTACTATCTCGAACCGATG TTTGCCCAGATCGCCCAGAAGGCCAAGGCAGAGGGGCATTCCTTCCACGGGGTCGAGTCCCTGTTGCTCGGCACCACCCA CAACGAAGTGGGTCACGTCATCGGCAGACGGTGGAATGTTCCGAAATTCGTGACTGATGCCATGCTCTACCATCATGAGC CGACCCACGCTCCCCAGGATGATGCCGGCCTCGTTTCCATCATCGCCGTCGCTGACCAGTTCTGCCGCTGGCGGAGCATC GACTACGGCGGGTATGAGGTGAGCGAGGGGGGCGAGACCGAATACGCGGCGTGGTGCCGCATGGCCGGGCACTTTCCCGG CATCGATGCAGACGCCATTGAGACGATCCTCCGTGACCTGGACAACGCCATTGAAGACATCAGGCTCCAGGTGGAATCGA TCTTCCTGTTCATCTGA
Upstream 100 bases:
>100_bases TCTGCGGGCAGGGTCGGTTTTCCTCTCAAGAAAGAGGCGGGGGATGCCGATAAGAGCTGTGAGTCCAAAAGGTTAGGGAC CAGGCACAGGAGGGTAGCCC
Downstream 100 bases:
>100_bases GAGCCCTTGTTGCGGCGGACGCCAGTGATGGGCATCACCTCACGATGGGGCATTCATGTCGCCCCTGGGGCGTCGGAACC TGCCGATCAGTAGATGCACG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MNVDNRIARAEELLATIPELPTVPTVIVSIVQKLHDPEVDIQEILDLLLMDQVLTIRLLRLANSPYYSTMKNIVSLKEAI LYLGLDHIKEVIYTCSIVDLFREGKGVIDRATLWSHALGVALVSKRIAKKVGYAEPDNAYIAGLLHDIGEVFLNYYLEPM FAQIAQKAKAEGHSFHGVESLLLGTTHNEVGHVIGRRWNVPKFVTDAMLYHHEPTHAPQDDAGLVSIIAVADQFCRWRSI DYGGYEVSEGGETEYAAWCRMAGHFPGIDADAIETILRDLDNAIEDIRLQVESIFLFI
Sequences:
>Translated_298_residues MNVDNRIARAEELLATIPELPTVPTVIVSIVQKLHDPEVDIQEILDLLLMDQVLTIRLLRLANSPYYSTMKNIVSLKEAI LYLGLDHIKEVIYTCSIVDLFREGKGVIDRATLWSHALGVALVSKRIAKKVGYAEPDNAYIAGLLHDIGEVFLNYYLEPM FAQIAQKAKAEGHSFHGVESLLLGTTHNEVGHVIGRRWNVPKFVTDAMLYHHEPTHAPQDDAGLVSIIAVADQFCRWRSI DYGGYEVSEGGETEYAAWCRMAGHFPGIDADAIETILRDLDNAIEDIRLQVESIFLFI >Mature_298_residues MNVDNRIARAEELLATIPELPTVPTVIVSIVQKLHDPEVDIQEILDLLLMDQVLTIRLLRLANSPYYSTMKNIVSLKEAI LYLGLDHIKEVIYTCSIVDLFREGKGVIDRATLWSHALGVALVSKRIAKKVGYAEPDNAYIAGLLHDIGEVFLNYYLEPM FAQIAQKAKAEGHSFHGVESLLLGTTHNEVGHVIGRRWNVPKFVTDAMLYHHEPTHAPQDDAGLVSIIAVADQFCRWRSI DYGGYEVSEGGETEYAAWCRMAGHFPGIDADAIETILRDLDNAIEDIRLQVESIFLFI
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 33379; Mature: 33379
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVDNRIARAEELLATIPELPTVPTVIVSIVQKLHDPEVDIQEILDLLLMDQVLTIRLLR CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LANSPYYSTMKNIVSLKEAILYLGLDHIKEVIYTCSIVDLFREGKGVIDRATLWSHALGV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALVSKRIAKKVGYAEPDNAYIAGLLHDIGEVFLNYYLEPMFAQIAQKAKAEGHSFHGVES HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LLLGTTHNEVGHVIGRRWNVPKFVTDAMLYHHEPTHAPQDDAGLVSIIAVADQFCRWRSI HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC DYGGYEVSEGGETEYAAWCRMAGHFPGIDADAIETILRDLDNAIEDIRLQVESIFLFI CCCCEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVDNRIARAEELLATIPELPTVPTVIVSIVQKLHDPEVDIQEILDLLLMDQVLTIRLLR CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LANSPYYSTMKNIVSLKEAILYLGLDHIKEVIYTCSIVDLFREGKGVIDRATLWSHALGV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALVSKRIAKKVGYAEPDNAYIAGLLHDIGEVFLNYYLEPMFAQIAQKAKAEGHSFHGVES HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LLLGTTHNEVGHVIGRRWNVPKFVTDAMLYHHEPTHAPQDDAGLVSIIAVADQFCRWRSI HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC DYGGYEVSEGGETEYAAWCRMAGHFPGIDADAIETILRDLDNAIEDIRLQVESIFLFI CCCCEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]