| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yeaH [C]
Identifier: 78221259
GI number: 78221259
Start: 38780
End: 40108
Strand: Direct
Name: yeaH [C]
Synonym: Gmet_0031
Alternate gene names: 78221259
Gene position: 38780-40108 (Clockwise)
Preceding gene: 78221258
Following gene: 78221260
Centisome position: 0.97
GC content: 61.1
Gene sequence:
>1329_bases GTGCGGCGTAGCGCTGCTACGCCTCCGCGCAATCATTCGATCGCCTTGACCTTGCGAACAATCCACGTTTCTATACGGTC TGAAACCAACATGAAAAACGAAGACTCCAAAATCTTTAAAATATGGGACATCTCCTCCCTTGCCCCCGGGCCTGAAGGGT CCTACACCACCCGGATTCGCTCCCTGGATGAACTTCTGGAGCGGGACCGGCTCCGGGAAGAGGACGGCTTTCCGCGCAAG ATCCGGATCGGCAAGCTCATCAAGCCGGGTAAGGGGAAACAGGAGAAGTTCGTGGTGGTTCCCACCACGGTGGAAGAGAA GTTCATGCACGACCGGGCCCCCACTCCTCCCGAAGAGGAGGAACCCATGGGGGGGACCGGCGACGAGGCGGAAGGGGATA TCCTTGGCGAGCAGCCGGTCCGCCCCGAGCAGGGGGCGGGAAGCGGCACCGCGGGGCACGGTGGCGGCGAGGGGCATGAA CTGGAGTCATCGGCCTACGACCTGGGGCGGATTCTGACGGAGCGGTTCAATCTGCCGAACCTGAAGGAAAAGGGGAAGAA GAGCTCCCTCTCCCACTACACCTACGACCTCACCGACCGCAACCGGGGCTTCGGCCAGATCCTCGAAAAGAAGCAGACCC TCAAGCGGGTCATCGAGACCAACATCGCCCTGGGGAACATCGATGATGTGACCAACATCGACACGACCCGCCTCCTCATC GACCCCCGGGACCGAATCTTCCGGATCCTCTCCCGGGAACTGGAGTACGAGTCCCAGGCCCTCGTCTTCTTCGTCCGCGA CTATTCCGGATCCATGGAGGGGAAGGCGTCGGAGGTGATCTGCTCCCAGCACGTGCTCATCTACAGCTGGCTCCTCTACC AGTTCGCCAGGCAGGTGGAGACCCGCTTCGTCCTCCATGACAACGACGCCCGGGAGGTCCCCGACTTCTACACCTACTAC AACCTCCGGGTTGCCGGGGGAACGAGGGTGGCGGCGGCCTACAAGATGGTGAACGACATCGTGGAGCAGGAGAGCCTTGC CAAGGATTACAACATCTACGTCTTCCACGGCACCGACGGCGACGACTGGGACACCAACGGCGAGGAGACCATTCCCGAAC TGCGGCGGATGCTCACCTACACCAACCGGGTGGGGATCACCATCGCCGAGCATAACGCCTACGGCTCCCGCGGGGCCACC GAGGTGGAGCGGTACCTGAAGGGGTCGGGGCTCCTGGATGAAAAGCCGGAGTTTTTGCGCATGGATGTGATGGGAGAGGA TGCCGACGAGACGCGGATTATCGATGGGATAAAACGTTTGATTTCTTAG
Upstream 100 bases:
>100_bases GCGCCCAGAAGACCATAGAGTACTTCTGCACGCAGGAAGACGAGATCTAGATAGAAACGCGGCTTTTCCGCAATCTCTGC GTTGATCTTCATAATTGCTT
Downstream 100 bases:
>100_bases GTGTCATAGGGTAGGGGCGCTGCTTGCCGCGCCCGTCACCGGATGCAAGGGCGCAGCAAGCGGCGCCCCTCCATAGACCT GAATATGGAACTCATCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIRSLDELLERDRLREEDGFPRK IRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEEEPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHE LESSAYDLGRILTERFNLPNLKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVETRFVLHDNDAREVPDFYTYY NLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDGDDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGAT EVERYLKGSGLLDEKPEFLRMDVMGEDADETRIIDGIKRLIS
Sequences:
>Translated_442_residues MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIRSLDELLERDRLREEDGFPRK IRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEEEPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHE LESSAYDLGRILTERFNLPNLKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVETRFVLHDNDAREVPDFYTYY NLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDGDDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGAT EVERYLKGSGLLDEKPEFLRMDVMGEDADETRIIDGIKRLIS >Mature_442_residues MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIRSLDELLERDRLREEDGFPRK IRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEEEPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHE LESSAYDLGRILTERFNLPNLKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVETRFVLHDNDAREVPDFYTYY NLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDGDDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGAT EVERYLKGSGLLDEKPEFLRMDVMGEDADETRIIDGIKRLIS
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=159, Percent_Identity=27.6729559748428, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014230 - InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 50129; Mature: 50129
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIR CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH SLDELLERDRLREEDGFPRKIRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEE HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCC EPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHELESSAYDLGRILTERFNLPN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI HHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVE CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRFVLHDNDAREVPDFYTYYNLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDG HEEEEECCCCHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC DDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGATEVERYLKGSGLLDEKPEFLR CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEE MDVMGEDADETRIIDGIKRLIS EEECCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIR CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH SLDELLERDRLREEDGFPRKIRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEE HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCC EPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHELESSAYDLGRILTERFNLPN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI HHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVE CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRFVLHDNDAREVPDFYTYYNLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDG HEEEEECCCCHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC DDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGATEVERYLKGSGLLDEKPEFLR CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEE MDVMGEDADETRIIDGIKRLIS EEECCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA