| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221258
Identifier: 78221258
GI number: 78221258
Start: 36669
End: 38729
Strand: Direct
Name: 78221258
Synonym: Gmet_0030
Alternate gene names: NA
Gene position: 36669-38729 (Clockwise)
Preceding gene: 78221257
Following gene: 78221259
Centisome position: 0.92
GC content: 61.62
Gene sequence:
>2061_bases ATGAACGGTACCGGCACCGTGACGCTTCGCGATCACATCGCTGCGGTCAAGGAGGGGAAACTCCGCTTCGAGAATGCCTT CCAGGGGGTGACTCGGATGATCCTGGAGCAGGGGGTCGACAAGGTTGTGGTCAACGGCCGCACCACCTACGATTTCCGGA TCTTCCGCACCGGCCGCAAGCACCCCGTCGGCATGTACGACGAGATAAACAGCTTCGTCTCCTTCGTGAAGGACGCGGCC GAGGGGGGCTCCTCCAAGGAGATGGCTTTCGTCCTGGTGGGAGAGCCGGGCAACGGCAAGACCTTCTTCGTGGAGTATGT CTGCGGCCGCTACCGGGAGTTCCTGTCGAAGCCCGAGAACCGGCGACATTCCTTCCGTTACACGGGGATGGCGCAGCTGG GGAGCTACGGGAAGATCGACATTATCGAGTCCCAGACCTACGAGGATCCCATGGTGCTCGCCATGAACCTCTTCGAGTCA CGGGACGAGGCCACGGAGTTCCTGGCCCGGGAGTTCGGCTTCACCGACAAGGAGCTGCAGCGCCTGGCCGACAACTACCG TCCCCTGGGGGCCTGCTCCAGCTACATCCTCAACGACATTCGCACCTTCACCGGCGGCAACATCGAAGAGATGCTGAAGT TCATCGAGGTGATTCCGGTCCCCCTAACCGAGACCCTCGGAACCGTCACCGGCAAATACGCGGCCAAGGACAAGATCACC TCCAGCGCCGTGGACCTTCTGGGTGAGGAGTCGATCCAGCGGCTTCTCCACATCACCGACATCAACAACCCCTACCGCTT CGATCTCCGCCGCGGCGCCCTGGCTCGGGTGGCCGGCGGCGGCATCCACTTCTCCGACGAGATCTACAAGAACAAGAAGG ATCTGGTGCAGGTCTACCTGGGGGTCATCCAGAACCGGGTCATCGAGATCGACGGCTACCGCTGGCCCATCGACACCCTC ATCATCGCCACCAGCAACAACGCCGAGTTCAACCGGTACCTCTCCGAGAAGGAAGAGGCTCCCATTATCGACCGCTGCCG CATCTGCTACGTCTCCCACAACACCAACTACCGGATGCAGGAGCAGCTCACCACCTACGCCATCGGCGGCGAGACCAAGA CCACCCTGAACCGGGAGGAGCTCCACCAGGACCCGAACCTGAACTACGCCGCCTGCGTGGGGGTGGTGCTCACGCGGCTT CCCCGCTCCGAGAAGCTCACCCCCATCGAGGCCATGAAGTTGGCCGCCGGCGAGATCGCCGGGGAGAAGAGCCTCAAGAC CCTGGCCGAGGTGGTGGACATCCTCAGCCAGGAGCAGGACGTCACCAAGCGCTTTGGCCAGAAGGGGCTCGGCCAGCGGA ACCTGGGGCGGGCCGTGCAACTCCTCGTGGAGAGCTCGGAAACCAACGAGGGGCGCTGCATGGTGGCCTACGACGTGTTC AAGTCCCTGGAGCGGATCGTTCTCGATTATGTCCCCGACCAGAACGACCGGGCCAAGTATCTGGAGGACCTGAAGATAGC CAAGGGGCTCTACCGCGAGCGGATCATGACTGAGATGTTCAACGCCTACATGGACGAGCCTTACGCCGTCAAGAAGGACG TCATGAACTACGTGAACATGATCATCGGCATCGACGCGGAGAGTCTCGGCCCCGACCGGATGTGGAAGTACAAGGATCCC CAGACCGGCGAGCTGAAGGCCCTGAAGATCGATGAGCGCTACGTGAAGAACGTGGAGGACCGGCTTGGCCTCAAGACCGA CGAGCAGCGGGAGAGCTTCCGCACCTCCATTCGCAAGATCTACGGCCAGAAGATATCGGTGGATTCCACCTACGACTTCA TGGACAACCTGGAGTTGGTGAAGGCGGTGACCGATGTGCGGCTCAAGAGCGACATCGCCGGTGCCGGGAGCCTCATCGGC GCCCTGGCCAACCGGACCAACGAGGAGAACCAGAAGCTCTACGACCGGATGGTTGACACCATGCTGAAGAAGCTGGGCTA CTGCCGGACCTGCGCCCAGAAGACCATAGAGTACTTCTGCACGCAGGAAGACGAGATCTAG
Upstream 100 bases:
>100_bases GTGTATACTTAATTGGCGCCAAGGGTTGCCCCGCGACCCGCACTTTTCGGGCTGGTGAAGACGCTCTTCGCCTGCCCGCG TTCCGAGGGGGGAGAAAACG
Downstream 100 bases:
>100_bases ATAGAAACGCGGCTTTTCCGCAATCTCTGCGTTGATCTTCATAATTGCTTGTGCGGCGTAGCGCTGCTACGCCTCCGCGC AATCATTCGATCGCCTTGAC
Product: putative serine protein kinase, PrkA
Products: NA
Alternate protein names: Serine Protein Kinase; PrkA Protein; Serine Protein Kinase P-Loop Containing; Protein Kinase; PrkA-Type Protein Kinase; Serine; Ser Protein Kinase
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MNGTGTVTLRDHIAAVKEGKLRFENAFQGVTRMILEQGVDKVVVNGRTTYDFRIFRTGRKHPVGMYDEINSFVSFVKDAA EGGSSKEMAFVLVGEPGNGKTFFVEYVCGRYREFLSKPENRRHSFRYTGMAQLGSYGKIDIIESQTYEDPMVLAMNLFES RDEATEFLAREFGFTDKELQRLADNYRPLGACSSYILNDIRTFTGGNIEEMLKFIEVIPVPLTETLGTVTGKYAAKDKIT SSAVDLLGEESIQRLLHITDINNPYRFDLRRGALARVAGGGIHFSDEIYKNKKDLVQVYLGVIQNRVIEIDGYRWPIDTL IIATSNNAEFNRYLSEKEEAPIIDRCRICYVSHNTNYRMQEQLTTYAIGGETKTTLNREELHQDPNLNYAACVGVVLTRL PRSEKLTPIEAMKLAAGEIAGEKSLKTLAEVVDILSQEQDVTKRFGQKGLGQRNLGRAVQLLVESSETNEGRCMVAYDVF KSLERIVLDYVPDQNDRAKYLEDLKIAKGLYRERIMTEMFNAYMDEPYAVKKDVMNYVNMIIGIDAESLGPDRMWKYKDP QTGELKALKIDERYVKNVEDRLGLKTDEQRESFRTSIRKIYGQKISVDSTYDFMDNLELVKAVTDVRLKSDIAGAGSLIG ALANRTNEENQKLYDRMVDTMLKKLGYCRTCAQKTIEYFCTQEDEI
Sequences:
>Translated_686_residues MNGTGTVTLRDHIAAVKEGKLRFENAFQGVTRMILEQGVDKVVVNGRTTYDFRIFRTGRKHPVGMYDEINSFVSFVKDAA EGGSSKEMAFVLVGEPGNGKTFFVEYVCGRYREFLSKPENRRHSFRYTGMAQLGSYGKIDIIESQTYEDPMVLAMNLFES RDEATEFLAREFGFTDKELQRLADNYRPLGACSSYILNDIRTFTGGNIEEMLKFIEVIPVPLTETLGTVTGKYAAKDKIT SSAVDLLGEESIQRLLHITDINNPYRFDLRRGALARVAGGGIHFSDEIYKNKKDLVQVYLGVIQNRVIEIDGYRWPIDTL IIATSNNAEFNRYLSEKEEAPIIDRCRICYVSHNTNYRMQEQLTTYAIGGETKTTLNREELHQDPNLNYAACVGVVLTRL PRSEKLTPIEAMKLAAGEIAGEKSLKTLAEVVDILSQEQDVTKRFGQKGLGQRNLGRAVQLLVESSETNEGRCMVAYDVF KSLERIVLDYVPDQNDRAKYLEDLKIAKGLYRERIMTEMFNAYMDEPYAVKKDVMNYVNMIIGIDAESLGPDRMWKYKDP QTGELKALKIDERYVKNVEDRLGLKTDEQRESFRTSIRKIYGQKISVDSTYDFMDNLELVKAVTDVRLKSDIAGAGSLIG ALANRTNEENQKLYDRMVDTMLKKLGYCRTCAQKTIEYFCTQEDEI >Mature_686_residues MNGTGTVTLRDHIAAVKEGKLRFENAFQGVTRMILEQGVDKVVVNGRTTYDFRIFRTGRKHPVGMYDEINSFVSFVKDAA EGGSSKEMAFVLVGEPGNGKTFFVEYVCGRYREFLSKPENRRHSFRYTGMAQLGSYGKIDIIESQTYEDPMVLAMNLFES RDEATEFLAREFGFTDKELQRLADNYRPLGACSSYILNDIRTFTGGNIEEMLKFIEVIPVPLTETLGTVTGKYAAKDKIT SSAVDLLGEESIQRLLHITDINNPYRFDLRRGALARVAGGGIHFSDEIYKNKKDLVQVYLGVIQNRVIEIDGYRWPIDTL IIATSNNAEFNRYLSEKEEAPIIDRCRICYVSHNTNYRMQEQLTTYAIGGETKTTLNREELHQDPNLNYAACVGVVLTRL PRSEKLTPIEAMKLAAGEIAGEKSLKTLAEVVDILSQEQDVTKRFGQKGLGQRNLGRAVQLLVESSETNEGRCMVAYDVF KSLERIVLDYVPDQNDRAKYLEDLKIAKGLYRERIMTEMFNAYMDEPYAVKKDVMNYVNMIIGIDAESLGPDRMWKYKDP QTGELKALKIDERYVKNVEDRLGLKTDEQRESFRTSIRKIYGQKISVDSTYDFMDNLELVKAVTDVRLKSDIAGAGSLIG ALANRTNEENQKLYDRMVDTMLKKLGYCRTCAQKTIEYFCTQEDEI
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78066; Mature: 78066
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTGTVTLRDHIAAVKEGKLRFENAFQGVTRMILEQGVDKVVVNGRTTYDFRIFRTGRK CCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCC HPVGMYDEINSFVSFVKDAAEGGSSKEMAFVLVGEPGNGKTFFVEYVCGRYREFLSKPEN CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCC RRHSFRYTGMAQLGSYGKIDIIESQTYEDPMVLAMNLFESRDEATEFLAREFGFTDKELQ CCCCEEECCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RLADNYRPLGACSSYILNDIRTFTGGNIEEMLKFIEVIPVPLTETLGTVTGKYAAKDKIT HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH SSAVDLLGEESIQRLLHITDINNPYRFDLRRGALARVAGGGIHFSDEIYKNKKDLVQVYL HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCHHHHHCCCCCEECHHHHHCHHHHHHHHH GVIQNRVIEIDGYRWPIDTLIIATSNNAEFNRYLSEKEEAPIIDRCRICYVSHNTNYRMQ HHHHCCEEEECCEECCCEEEEEEECCCCHHHHHHHHCCCCCCHHCCEEEEEECCCCCCHH EQLTTYAIGGETKTTLNREELHQDPNLNYAACVGVVLTRLPRSEKLTPIEAMKLAAGEIA HHHHHEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GEKSLKTLAEVVDILSQEQDVTKRFGQKGLGQRNLGRAVQLLVESSETNEGRCMVAYDVF CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHH KSLERIVLDYVPDQNDRAKYLEDLKIAKGLYRERIMTEMFNAYMDEPYAVKKDVMNYVNM HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IIGIDAESLGPDRMWKYKDPQTGELKALKIDERYVKNVEDRLGLKTDEQRESFRTSIRKI HHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCHHHHCCCCCCHHHHHHHHHHHHH YGQKISVDSTYDFMDNLELVKAVTDVRLKSDIAGAGSLIGALANRTNEENQKLYDRMVDT HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH MLKKLGYCRTCAQKTIEYFCTQEDEI HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNGTGTVTLRDHIAAVKEGKLRFENAFQGVTRMILEQGVDKVVVNGRTTYDFRIFRTGRK CCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCC HPVGMYDEINSFVSFVKDAAEGGSSKEMAFVLVGEPGNGKTFFVEYVCGRYREFLSKPEN CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCC RRHSFRYTGMAQLGSYGKIDIIESQTYEDPMVLAMNLFESRDEATEFLAREFGFTDKELQ CCCCEEECCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RLADNYRPLGACSSYILNDIRTFTGGNIEEMLKFIEVIPVPLTETLGTVTGKYAAKDKIT HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH SSAVDLLGEESIQRLLHITDINNPYRFDLRRGALARVAGGGIHFSDEIYKNKKDLVQVYL HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCHHHHHCCCCCEECHHHHHCHHHHHHHHH GVIQNRVIEIDGYRWPIDTLIIATSNNAEFNRYLSEKEEAPIIDRCRICYVSHNTNYRMQ HHHHCCEEEECCEECCCEEEEEEECCCCHHHHHHHHCCCCCCHHCCEEEEEECCCCCCHH EQLTTYAIGGETKTTLNREELHQDPNLNYAACVGVVLTRLPRSEKLTPIEAMKLAAGEIA HHHHHEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GEKSLKTLAEVVDILSQEQDVTKRFGQKGLGQRNLGRAVQLLVESSETNEGRCMVAYDVF CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHH KSLERIVLDYVPDQNDRAKYLEDLKIAKGLYRERIMTEMFNAYMDEPYAVKKDVMNYVNM HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IIGIDAESLGPDRMWKYKDPQTGELKALKIDERYVKNVEDRLGLKTDEQRESFRTSIRKI HHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCHHHHCCCCCCHHHHHHHHHHHHH YGQKISVDSTYDFMDNLELVKAVTDVRLKSDIAGAGSLIGALANRTNEENQKLYDRMVDT HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH MLKKLGYCRTCAQKTIEYFCTQEDEI HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA