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The map label for this gene is glgA

Identifier: 78189764

GI number: 78189764

Start: 2329365

End: 2330834

Strand: Reverse

Name: glgA

Synonym: Cag_1808

Alternate gene names: 78189764

Gene position: 2330834-2329365 (Counterclockwise)

Preceding gene: 78189767

Following gene: 78189763

Centisome position: 90.62

GC content: 43.54

Gene sequence:

>1470_bases
ATGTCGAGACGAAATAGTAAAGTTCTTTATGTTTCAGGTGAAGTTGCCCCTTTTGTAAGAATCACTGCCCTCGCTGATTT
TATGGCTTCGTTTCCTCAAACAGTTGAAGATGAGGGATTTGAAGCTCGCATTATGATGCCAAAGTATGGCATTATCAACG
ATCGTAAGTTCCGCTTACACGATGTGCTTCGCCTCTCCGATATTGAAGTTCACCTCAAGGATAAAGTGGATATGCTTGAT
GTGAAAGTTACCGCTTTGCCCTCAAGTAAAATTCAGACCTATTTTCTCTACAATGAAAAATATTTCAAGCGCCATGCGTG
GTTTCCTGATTTAAGTACAGGAAATGATGCTCGCGTAACGGTTGAAAAAATTGTTTTTTTCAACGTTGGTGTGCTTGAAA
CCTTACTCCGTTTGGGTTGGAAGCCCGATATCATTCATTGCAATGATTGGCATACAGCGCTCATTCCCTTGCTTTTAAAG
ACGATGTATGCGTCGCATGAGTTTTTCCGCAATGTTAAGACGCTTTTTTCTATTCATAATGCCTATCGGCAGGGAAATTT
TCCCCTCAAGCATTTTCAGCGCTTGCTGCCCGATGAGGTATGCGCAGGCTTGCATTGTGTAAAGGATGAGGTGAATCTTC
TTTTTACGGGCATTGACCATGTTGAGCTGTTAACCACCACATCGCCTCGCTATGCTGAATGCCTACGTGGTGATACGCCT
GAAGCCTTTGGAGTAGGTAAACGTTTATTGGAGCGGGAGTTACCGTTGCATGGCATGGTTAATGGGCTTGATGCACGGCA
ATGGAATCCCGCAATAGATAAGATGATTAAAAAGCGTTATTCAACCGAAAATATGAATGGCAAGGTTGAAAATCGCAAAA
TGCTCTTAGAGGAAATGAAGTTACCATGGCGTGATGGTATGCCGCTTGTCGGTTTTATTGCCACGTTTGATGATTATCAA
GGTGCTAAACTTTTAGCCGATTCACTCGAAAAACTGATAGCGCAAGATATTCAACTTGTTATTATTGGGTTTGGGGATAA
AAAGTGTGAGCAACGTTTTCAAGAATTTGTGGTAGCTCATCCGGAACAGGTAAGTGTGCAAGCTGAGTGCTCCGATTCAT
TTTTACATTTAGCAATTGCTGGGCTTGATTTACTGCTTATGCCAAGCAAAGTTGAGTCGTGCGGTATGCTGCAAATGAGT
GCCATGACGTATGGCACCATTCCAATTGCACGCGCAACGGGTGGCATTGTTGAAACCATTCAAGATCACGGTGAAAATTT
AGGTACGGGCTTTTTGTTTGATGATTATAGTGTAGAGGGGCTCAGTGGGCGTCTTGCTGATGCATTGCGCTGTTTTCATG
ATGACGAGTGTTGGCCTGCATTGGTTGAGCGTGCCATGAGTAGTGATTTTAGTTGGCACAACACGGCAGAGGCGTATGGG
CAGTTGTACCGCAATCTTCTTGGCAAATAG

Upstream 100 bases:

>100_bases
TGTGGTTGGATTGTTTCTGACGGTGAAAATTCGTAAATTAGAAACTAATGTGATTCTATAAAAGCCTTTTACGAAAAATT
ATAGATTGGTTCTCCTATAG

Downstream 100 bases:

>100_bases
GGGGGAAATGGTATGAGCGAACAACAGCGCATTAAGGTGCTTTTTTTAGATCGTGATGGCACTATTAATCACGATACGGG
TTCCTACATTAATTCTATTG

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MSRRNSKVLYVSGEVAPFVRITALADFMASFPQTVEDEGFEARIMMPKYGIINDRKFRLHDVLRLSDIEVHLKDKVDMLD
VKVTALPSSKIQTYFLYNEKYFKRHAWFPDLSTGNDARVTVEKIVFFNVGVLETLLRLGWKPDIIHCNDWHTALIPLLLK
TMYASHEFFRNVKTLFSIHNAYRQGNFPLKHFQRLLPDEVCAGLHCVKDEVNLLFTGIDHVELLTTTSPRYAECLRGDTP
EAFGVGKRLLERELPLHGMVNGLDARQWNPAIDKMIKKRYSTENMNGKVENRKMLLEEMKLPWRDGMPLVGFIATFDDYQ
GAKLLADSLEKLIAQDIQLVIIGFGDKKCEQRFQEFVVAHPEQVSVQAECSDSFLHLAIAGLDLLLMPSKVESCGMLQMS
AMTYGTIPIARATGGIVETIQDHGENLGTGFLFDDYSVEGLSGRLADALRCFHDDECWPALVERAMSSDFSWHNTAEAYG
QLYRNLLGK

Sequences:

>Translated_489_residues
MSRRNSKVLYVSGEVAPFVRITALADFMASFPQTVEDEGFEARIMMPKYGIINDRKFRLHDVLRLSDIEVHLKDKVDMLD
VKVTALPSSKIQTYFLYNEKYFKRHAWFPDLSTGNDARVTVEKIVFFNVGVLETLLRLGWKPDIIHCNDWHTALIPLLLK
TMYASHEFFRNVKTLFSIHNAYRQGNFPLKHFQRLLPDEVCAGLHCVKDEVNLLFTGIDHVELLTTTSPRYAECLRGDTP
EAFGVGKRLLERELPLHGMVNGLDARQWNPAIDKMIKKRYSTENMNGKVENRKMLLEEMKLPWRDGMPLVGFIATFDDYQ
GAKLLADSLEKLIAQDIQLVIIGFGDKKCEQRFQEFVVAHPEQVSVQAECSDSFLHLAIAGLDLLLMPSKVESCGMLQMS
AMTYGTIPIARATGGIVETIQDHGENLGTGFLFDDYSVEGLSGRLADALRCFHDDECWPALVERAMSSDFSWHNTAEAYG
QLYRNLLGK
>Mature_488_residues
SRRNSKVLYVSGEVAPFVRITALADFMASFPQTVEDEGFEARIMMPKYGIINDRKFRLHDVLRLSDIEVHLKDKVDMLDV
KVTALPSSKIQTYFLYNEKYFKRHAWFPDLSTGNDARVTVEKIVFFNVGVLETLLRLGWKPDIIHCNDWHTALIPLLLKT
MYASHEFFRNVKTLFSIHNAYRQGNFPLKHFQRLLPDEVCAGLHCVKDEVNLLFTGIDHVELLTTTSPRYAECLRGDTPE
AFGVGKRLLERELPLHGMVNGLDARQWNPAIDKMIKKRYSTENMNGKVENRKMLLEEMKLPWRDGMPLVGFIATFDDYQG
AKLLADSLEKLIAQDIQLVIIGFGDKKCEQRFQEFVVAHPEQVSVQAECSDSFLHLAIAGLDLLLMPSKVESCGMLQMSA
MTYGTIPIARATGGIVETIQDHGENLGTGFLFDDYSVEGLSGRLADALRCFHDDECWPALVERAMSSDFSWHNTAEAYGQ
LYRNLLGK

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=491, Percent_Identity=28.1059063136456, Blast_Score=202, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_CHLCH (Q3APL6)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_380102.1
- STRING:   Q3APL6
- GeneID:   3746923
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_1808
- eggNOG:   COG0297
- HOGENOM:   HBG596384
- OMA:   RMFAGSD
- ProtClustDB:   PRK14098
- BioCyc:   CCHL340177:CAG_1808-MONOMER
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 55627; Mature: 55496

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: BINDING 20-20

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRNSKVLYVSGEVAPFVRITALADFMASFPQTVEDEGFEARIMMPKYGIINDRKFRLH
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
DVLRLSDIEVHLKDKVDMLDVKVTALPSSKIQTYFLYNEKYFKRHAWFPDLSTGNDARVT
HHHHHCCCEEEECCCCEEEEEEEEECCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCEEE
VEKIVFFNVGVLETLLRLGWKPDIIHCNDWHTALIPLLLKTMYASHEFFRNVKTLFSIHN
EEHHHHHCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYRQGNFPLKHFQRLLPDEVCAGLHCVKDEVNLLFTGIDHVELLTTTSPRYAECLRGDTP
HHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHCCCCC
EAFGVGKRLLERELPLHGMVNGLDARQWNPAIDKMIKKRYSTENMNGKVENRKMLLEEMK
HHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
LPWRDGMPLVGFIATFDDYQGAKLLADSLEKLIAQDIQLVIIGFGDKKCEQRFQEFVVAH
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCC
PEQVSVQAECSDSFLHLAIAGLDLLLMPSKVESCGMLQMSAMTYGTIPIARATGGIVETI
CCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCEEEHHHHCCCCCHHHHCCHHHHHH
QDHGENLGTGFLFDDYSVEGLSGRLADALRCFHDDECWPALVERAMSSDFSWHNTAEAYG
HHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
QLYRNLLGK
HHHHHHHCC
>Mature Secondary Structure 
SRRNSKVLYVSGEVAPFVRITALADFMASFPQTVEDEGFEARIMMPKYGIINDRKFRLH
CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
DVLRLSDIEVHLKDKVDMLDVKVTALPSSKIQTYFLYNEKYFKRHAWFPDLSTGNDARVT
HHHHHCCCEEEECCCCEEEEEEEEECCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCEEE
VEKIVFFNVGVLETLLRLGWKPDIIHCNDWHTALIPLLLKTMYASHEFFRNVKTLFSIHN
EEHHHHHCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYRQGNFPLKHFQRLLPDEVCAGLHCVKDEVNLLFTGIDHVELLTTTSPRYAECLRGDTP
HHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHCCCCC
EAFGVGKRLLERELPLHGMVNGLDARQWNPAIDKMIKKRYSTENMNGKVENRKMLLEEMK
HHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
LPWRDGMPLVGFIATFDDYQGAKLLADSLEKLIAQDIQLVIIGFGDKKCEQRFQEFVVAH
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCC
PEQVSVQAECSDSFLHLAIAGLDLLLMPSKVESCGMLQMSAMTYGTIPIARATGGIVETI
CCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCEEEHHHHCCCCCHHHHCCHHHHHH
QDHGENLGTGFLFDDYSVEGLSGRLADALRCFHDDECWPALVERAMSSDFSWHNTAEAYG
HHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
QLYRNLLGK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA