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The map label for this gene is stbB [H]

Identifier: 78189733

GI number: 78189733

Start: 2294862

End: 2295293

Strand: Reverse

Name: stbB [H]

Synonym: Cag_1777

Alternate gene names: 78189733

Gene position: 2295293-2294862 (Counterclockwise)

Preceding gene: 78189734

Following gene: 78189731

Centisome position: 89.24

GC content: 32.87

Gene sequence:

>432_bases
ATGAATAAAAGATTTTTGCTTGATACCAATGTGCTCTCTGAATTAATGAAAAACAATCCAGAAAAAAAGGTAATTCAGTG
GTTTGATGCACATCAACATGAAAGATTTTTTACTTCATCAATAACAAAAGCAGAAATATTGTTAGGTATTGCATTACTTC
CCAAAGGTAGGCGACAAAAGCAACTGTATGAAGCAACATTCAAACTCTTTTCTACAACATTTTTGGAATATTGTTTTCCA
TTTTGTGAGCGTGCCGCTGTAGTTTATTCAGATATTGTAGCACACCAAAAAAGAATTGGTAGAGGTATATGTACTGAGGA
TGCTCAAATTGCAGCAATAGCCTTAACAGAAAATCTTACCTTAGCAACAAGAAACGTGAAAGATTTTCATTTTATTCAAG
GTTTAGAAATAAGCAATCCATGGCATGGATAA

Upstream 100 bases:

>100_bases
CGGACAAGAAATCCATGATTTATTTAAAGGATTGCATGGTGATGATATCTTATTGCCGTCACGTCATGTTATGAGAAATC
CACCAGATTTATAAGAATTT

Downstream 100 bases:

>100_bases
GTCAAATGCTTGTTGAAATAGAGCGACATCTTTCATAACGAGTTTTGCTCCTGCTTCTTATTACTTTACTATCCTTTTAC
CCATTCAAAATAGCGAAGAG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNKRFLLDTNVLSELMKNNPEKKVIQWFDAHQHERFFTSSITKAEILLGIALLPKGRRQKQLYEATFKLFSTTFLEYCFP
FCERAAVVYSDIVAHQKRIGRGICTEDAQIAAIALTENLTLATRNVKDFHFIQGLEISNPWHG

Sequences:

>Translated_143_residues
MNKRFLLDTNVLSELMKNNPEKKVIQWFDAHQHERFFTSSITKAEILLGIALLPKGRRQKQLYEATFKLFSTTFLEYCFP
FCERAAVVYSDIVAHQKRIGRGICTEDAQIAAIALTENLTLATRNVKDFHFIQGLEISNPWHG
>Mature_143_residues
MNKRFLLDTNVLSELMKNNPEKKVIQWFDAHQHERFFTSSITKAEILLGIALLPKGRRQKQLYEATFKLFSTTFLEYCFP
FCERAAVVYSDIVAHQKRIGRGICTEDAQIAAIALTENLTLATRNVKDFHFIQGLEISNPWHG

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 16504; Mature: 16504

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRFLLDTNVLSELMKNNPEKKVIQWFDAHQHERFFTSSITKAEILLGIALLPKGRRQK
CCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QLYEATFKLFSTTFLEYCFPFCERAAVVYSDIVAHQKRIGRGICTEDAQIAAIALTENLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCE
LATRNVKDFHFIQGLEISNPWHG
EEECCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNKRFLLDTNVLSELMKNNPEKKVIQWFDAHQHERFFTSSITKAEILLGIALLPKGRRQK
CCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QLYEATFKLFSTTFLEYCFPFCERAAVVYSDIVAHQKRIGRGICTEDAQIAAIALTENLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCE
LATRNVKDFHFIQGLEISNPWHG
EEECCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]