Click here to switch to the map view.

The map label for this gene is 78189477

Identifier: 78189477

GI number: 78189477

Start: 1991123

End: 1991956

Strand: Reverse

Name: 78189477

Synonym: Cag_1517

Alternate gene names: NA

Gene position: 1991956-1991123 (Counterclockwise)

Preceding gene: 78189479

Following gene: 78189476

Centisome position: 77.45

GC content: 41.97

Gene sequence:

>834_bases
ATGGATAATAATCTCCCTCTTTTTGTTGTCAATCAGTTGGTAACCATCCTCTATTTGGCAACCACGTTTCTTTACGGCGC
TCACTTTTTTATGGACATGGCTATTGCGCGGCAGTTTAAGCAGCCTGCACTTATTACCACCGTGATTGTTCATGTGTTTT
ACCTCGGCTTTTTAACCTCTACGCAAGGCTATCAGCTTAGTTATTCAACACTGAATTTAATGACCATGGTGGGCTTTACG
CTTACCAGCATCTACCTTCTTACTGAATTCACCACCAAAAGCGATAAATCGGGCTTTTTTATTATCTCGTTTGCGGCTGG
TGCCCAGCTTCTCTCGTCGTTACTCATTACGCAAGTGGAGCAAAGCAGCCAAACCTTTAGCGGATTAAGTAGTGGATTGC
ATCTTTTAATGGCAATTTTTAGCTTTAGCTCTATTGCCATTGCGGGCATTTACAGTCTTCTCTATCTCTTGCTTTTTCGC
CAAATTCAGCAAAATCGTTTTGAGCTGTTTTTTCAGCGCTTACCCAATCTTGAAGTGCTTGAAATGCTCTGTATGCACGC
TGTTTCGCTTGGATTTTTGTTTATCAGCTTAACGCTGTTGTCAGGTTTGTGGGCGCAAAGCAACACCAACGTAGCTATTG
CCGTTATGGAGCCAAAATTTATCACCATGGCGGTTATTTGGCTGATTTATGGTGCTGGTATGTTTATTAAGCCCTTTAAA
GGGTGGGATATGAAGCACATGGCATATCTCTTGATTTTTTTGTTCCTCTTTGTAACACTCTTAATTGTCTTGATGACGTT
ATCATCACCCACGTTCCATAGTCGCTTGCTGTAG

Upstream 100 bases:

>100_bases
GGAAGGAACCAGCAACCAGCTCAAGTGGTTAGCATTGGAAATTGCTGAAGAATCGGTAACGAAGCTTTTTAGTGTAATTT
TTTTACTCTTATTATATCTC

Downstream 100 bases:

>100_bases
GGAATCTATTGAACCTTTGGATTCTTTGGCTTTAGCAGCCACTCAAGCCATTTTAAAACCAGCTTGGTGGCTGTAAGGTT
TATTAAATTATCCAAAAAGG

Product: HemX protein

Products: NA

Alternate protein names: HemX Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDNNLPLFVVNQLVTILYLATTFLYGAHFFMDMAIARQFKQPALITTVIVHVFYLGFLTSTQGYQLSYSTLNLMTMVGFT
LTSIYLLTEFTTKSDKSGFFIISFAAGAQLLSSLLITQVEQSSQTFSGLSSGLHLLMAIFSFSSIAIAGIYSLLYLLLFR
QIQQNRFELFFQRLPNLEVLEMLCMHAVSLGFLFISLTLLSGLWAQSNTNVAIAVMEPKFITMAVIWLIYGAGMFIKPFK
GWDMKHMAYLLIFLFLFVTLLIVLMTLSSPTFHSRLL

Sequences:

>Translated_277_residues
MDNNLPLFVVNQLVTILYLATTFLYGAHFFMDMAIARQFKQPALITTVIVHVFYLGFLTSTQGYQLSYSTLNLMTMVGFT
LTSIYLLTEFTTKSDKSGFFIISFAAGAQLLSSLLITQVEQSSQTFSGLSSGLHLLMAIFSFSSIAIAGIYSLLYLLLFR
QIQQNRFELFFQRLPNLEVLEMLCMHAVSLGFLFISLTLLSGLWAQSNTNVAIAVMEPKFITMAVIWLIYGAGMFIKPFK
GWDMKHMAYLLIFLFLFVTLLIVLMTLSSPTFHSRLL
>Mature_277_residues
MDNNLPLFVVNQLVTILYLATTFLYGAHFFMDMAIARQFKQPALITTVIVHVFYLGFLTSTQGYQLSYSTLNLMTMVGFT
LTSIYLLTEFTTKSDKSGFFIISFAAGAQLLSSLLITQVEQSSQTFSGLSSGLHLLMAIFSFSSIAIAGIYSLLYLLLFR
QIQQNRFELFFQRLPNLEVLEMLCMHAVSLGFLFISLTLLSGLWAQSNTNVAIAVMEPKFITMAVIWLIYGAGMFIKPFK
GWDMKHMAYLLIFLFLFVTLLIVLMTLSSPTFHSRLL

Specific function: Unknown

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31296; Mature: 31296

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNLPLFVVNQLVTILYLATTFLYGAHFFMDMAIARQFKQPALITTVIVHVFYLGFLTS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
TQGYQLSYSTLNLMTMVGFTLTSIYLLTEFTTKSDKSGFFIISFAAGAQLLSSLLITQVE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
QSSQTFSGLSSGLHLLMAIFSFSSIAIAGIYSLLYLLLFRQIQQNRFELFFQRLPNLEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EMLCMHAVSLGFLFISLTLLSGLWAQSNTNVAIAVMEPKFITMAVIWLIYGAGMFIKPFK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECCC
GWDMKHMAYLLIFLFLFVTLLIVLMTLSSPTFHSRLL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MDNNLPLFVVNQLVTILYLATTFLYGAHFFMDMAIARQFKQPALITTVIVHVFYLGFLTS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
TQGYQLSYSTLNLMTMVGFTLTSIYLLTEFTTKSDKSGFFIISFAAGAQLLSSLLITQVE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
QSSQTFSGLSSGLHLLMAIFSFSSIAIAGIYSLLYLLLFRQIQQNRFELFFQRLPNLEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EMLCMHAVSLGFLFISLTLLSGLWAQSNTNVAIAVMEPKFITMAVIWLIYGAGMFIKPFK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECCC
GWDMKHMAYLLIFLFLFVTLLIVLMTLSSPTFHSRLL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA