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The map label for this gene is ybaB [C]

Identifier: 78189157

GI number: 78189157

Start: 1584468

End: 1584803

Strand: Reverse

Name: ybaB [C]

Synonym: Cag_1190

Alternate gene names: 78189157

Gene position: 1584803-1584468 (Counterclockwise)

Preceding gene: 78189158

Following gene: 78189156

Centisome position: 61.62

GC content: 45.24

Gene sequence:

>336_bases
ATGGCTATGCCAAATCTTGGCGATATGATGAAGCAAATCCAGCAAGCAGGCGAAAAAATGCAGGAGGTGCAAAAGCAGCT
TGAACGCCTTGTGGCTCACGGCGAAGCAGGTGGCGGTATGGTAAAAGCCACCGTTAGTGGTAAGCAAAAGCTGTTGAGCC
TTGCCATTGATCCCGAAATTATGGATGACTACGAAATGGTGCAAGACCTTGTGGTGGCAGCCGTTAACAGTGCATTAGAT
GCATCGTTAAAGCTTGCGCAAGATGAAATTGGTAAGGTTACTGGTGGTATGATGAATCCTACCGAATTATTAAAAAACCT
CAATCTTGGTCAATAA

Upstream 100 bases:

>100_bases
TTAATTGGTTTGGTTAATTATAATGTTTGAATTTTGCACCGTAGAGACGCGATTAATTGCGTCTCTACGGATTTTTAATA
GATAATTAGGAGAAGCAATT

Downstream 100 bases:

>100_bases
AGGGTAGATGCGATTTCCTTCCGTTGCGCTTGATACTCTGATTGACGAATTTGCAAAGCTTCCCGGTATTGGGCGCAAAA
CTGCTCAACGCTTGGCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAMPNLGDMMKQIQQAGEKMQEVQKQLERLVAHGEAGGGMVKATVSGKQKLLSLAIDPEIMDDYEMVQDLVVAAVNSALD
ASLKLAQDEIGKVTGGMMNPTELLKNLNLGQ

Sequences:

>Translated_111_residues
MAMPNLGDMMKQIQQAGEKMQEVQKQLERLVAHGEAGGGMVKATVSGKQKLLSLAIDPEIMDDYEMVQDLVVAAVNSALD
ASLKLAQDEIGKVTGGMMNPTELLKNLNLGQ
>Mature_110_residues
AMPNLGDMMKQIQQAGEKMQEVQKQLERLVAHGEAGGGMVKATVSGKQKLLSLAIDPEIMDDYEMVQDLVVAAVNSALDA
SLKLAQDEIGKVTGGMMNPTELLKNLNLGQ

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=96, Percent_Identity=40.625, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1190_CHLCH (Q3ARC3)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_379495.1
- ProteinModelPortal:   Q3ARC3
- SMR:   Q3ARC3
- STRING:   Q3ARC3
- GeneID:   3748224
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_1190
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   IVTAYTE
- ProtClustDB:   PRK14621
- BioCyc:   CCHL340177:CAG_1190-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11912; Mature: 11781

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMPNLGDMMKQIQQAGEKMQEVQKQLERLVAHGEAGGGMVKATVSGKQKLLSLAIDPEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCHH
MDDYEMVQDLVVAAVNSALDASLKLAQDEIGKVTGGMMNPTELLKNLNLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
AMPNLGDMMKQIQQAGEKMQEVQKQLERLVAHGEAGGGMVKATVSGKQKLLSLAIDPEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCHH
MDDYEMVQDLVVAAVNSALDASLKLAQDEIGKVTGGMMNPTELLKNLNLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA