Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78189158

Identifier: 78189158

GI number: 78189158

Start: 1584910

End: 1585443

Strand: Reverse

Name: 78189158

Synonym: Cag_1191

Alternate gene names: NA

Gene position: 1585443-1584910 (Counterclockwise)

Preceding gene: 78189159

Following gene: 78189157

Centisome position: 61.64

GC content: 36.7

Gene sequence:

>534_bases
ATGATGGATTGTAGGGGCAACCCTTGCGGTTGCCCTGTGGTTGTTTTTTCAATTATGAATTATGCGTGTTTGCTGATAAA
AATTGAATTGCTAAATCAATTTTATTTCTATTCTCCGAATCACAGTCAACGGTTACAAATAGGAGCCATCAACATGAAAA
AGCGTTGGATATTGCTATTATTGGCTTTAGGAACTAACGTTCCAGAAAGTAAAGCTGACTATACCATTCATGGTTATACC
TCACCAGATGGTCAAAGTACTTTTCATGTAAGGGAGAATCCGTTACAGAATCCGTTACAGAAATTAGCTGATGATCTTGA
AAGAAATAATAATAAGTCAGAACGTCCATCAGATGCATTCTATCGTGGTTACGAACAGGCACAAAAAATGAAAATGATGA
TAGAACAGCGTAGGCTTATGGAAGAGCAAAGAAAGCTTTTAGAAGAACAGAGAAAGCTTTTAGAGCAAACAAGACTTGAA
CAGCAAACAAGACTTGAACAGCAAACAAGACTTGAACAACAAACGAAAGAGTAA

Upstream 100 bases:

>100_bases
AAAAATCTACCTTGCATTACGCCGTAAATCGTAACGCTGCATAGCAGTTCTAAATATTCCCCTCCTATGGAGGAGTGCCC
GAAGGGCGGGGTGGTTATGG

Downstream 100 bases:

>100_bases
AATTGATTAATTGGTTTGGTTAATTATAATGTTTGAATTTTGCACCGTAGAGACGCGATTAATTGCGTCTCTACGGATTT
TTAATAGATAATTAGGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLLLALGTNVPESKADYTIHGYT
SPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAFYRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLE
QQTRLEQQTRLEQQTKE

Sequences:

>Translated_177_residues
MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLLLALGTNVPESKADYTIHGYT
SPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAFYRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLE
QQTRLEQQTRLEQQTKE
>Mature_177_residues
MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLLLALGTNVPESKADYTIHGYT
SPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAFYRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLE
QQTRLEQQTRLEQQTKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20940; Mature: 20940

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCHHHHHHHHH
LALGTNVPESKADYTIHGYTSPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAF
HHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
YRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLEQQTRLEQQTRLEQQTKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCHHHHHHHHH
LALGTNVPESKADYTIHGYTSPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAF
HHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
YRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLEQQTRLEQQTRLEQQTKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA