| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189158
Identifier: 78189158
GI number: 78189158
Start: 1584910
End: 1585443
Strand: Reverse
Name: 78189158
Synonym: Cag_1191
Alternate gene names: NA
Gene position: 1585443-1584910 (Counterclockwise)
Preceding gene: 78189159
Following gene: 78189157
Centisome position: 61.64
GC content: 36.7
Gene sequence:
>534_bases ATGATGGATTGTAGGGGCAACCCTTGCGGTTGCCCTGTGGTTGTTTTTTCAATTATGAATTATGCGTGTTTGCTGATAAA AATTGAATTGCTAAATCAATTTTATTTCTATTCTCCGAATCACAGTCAACGGTTACAAATAGGAGCCATCAACATGAAAA AGCGTTGGATATTGCTATTATTGGCTTTAGGAACTAACGTTCCAGAAAGTAAAGCTGACTATACCATTCATGGTTATACC TCACCAGATGGTCAAAGTACTTTTCATGTAAGGGAGAATCCGTTACAGAATCCGTTACAGAAATTAGCTGATGATCTTGA AAGAAATAATAATAAGTCAGAACGTCCATCAGATGCATTCTATCGTGGTTACGAACAGGCACAAAAAATGAAAATGATGA TAGAACAGCGTAGGCTTATGGAAGAGCAAAGAAAGCTTTTAGAAGAACAGAGAAAGCTTTTAGAGCAAACAAGACTTGAA CAGCAAACAAGACTTGAACAGCAAACAAGACTTGAACAACAAACGAAAGAGTAA
Upstream 100 bases:
>100_bases AAAAATCTACCTTGCATTACGCCGTAAATCGTAACGCTGCATAGCAGTTCTAAATATTCCCCTCCTATGGAGGAGTGCCC GAAGGGCGGGGTGGTTATGG
Downstream 100 bases:
>100_bases AATTGATTAATTGGTTTGGTTAATTATAATGTTTGAATTTTGCACCGTAGAGACGCGATTAATTGCGTCTCTACGGATTT TTAATAGATAATTAGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLLLALGTNVPESKADYTIHGYT SPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAFYRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLE QQTRLEQQTRLEQQTKE
Sequences:
>Translated_177_residues MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLLLALGTNVPESKADYTIHGYT SPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAFYRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLE QQTRLEQQTRLEQQTKE >Mature_177_residues MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLLLALGTNVPESKADYTIHGYT SPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAFYRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLE QQTRLEQQTRLEQQTKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20940; Mature: 20940
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCHHHHHHHHH LALGTNVPESKADYTIHGYTSPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAF HHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHH YRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLEQQTRLEQQTRLEQQTKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMDCRGNPCGCPVVVFSIMNYACLLIKIELLNQFYFYSPNHSQRLQIGAINMKKRWILLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCHHHHHHHHH LALGTNVPESKADYTIHGYTSPDGQSTFHVRENPLQNPLQKLADDLERNNNKSERPSDAF HHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHH YRGYEQAQKMKMMIEQRRLMEEQRKLLEEQRKLLEQTRLEQQTRLEQQTRLEQQTKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA