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The map label for this gene is yngJ [H]

Identifier: 78067688

GI number: 78067688

Start: 3375448

End: 3376584

Strand: Reverse

Name: yngJ [H]

Synonym: Bcep18194_A6219

Alternate gene names: 78067688

Gene position: 3376584-3375448 (Counterclockwise)

Preceding gene: 78067689

Following gene: 78067687

Centisome position: 91.4

GC content: 69.66

Gene sequence:

>1137_bases
ATGGATTTCCAGCACACAGAAGACCGCCGGATGCTGGCGGATACGTTGAACCGCTTCATCGCCGAACAGTACGCGTTCCC
GGTGCGCGATCGCATCGCGCAGTCGGCCGAAGGGTTCGATCGCGCGATGTGGCAGCGCTTTGCCGAACTTGGCACCGTCG
GCGCGCTGTTTCCCGAAGCCGACGGCGGGTTCGGCGGCGCGGGTTTCGACATCGCCGTGGTGTTCGAATGCCTTGGGCGC
GGGCTCGTCGTCGAGCCGTTCCTCGGCGCGCTGCTCGCGGGCCGTGCGCTGTCGCTCGCCGGTGGCGCTGCGCATCGCGA
CCGGCTGGCCGCGCTGATCGACGGCAGCGCGAGCGCCGCGTTCGCGCATGACGAGCCGGGCTCGCACTACGAACTGACGA
CCGTGCGCACGCGCGCCGAACGCTCGAGCGACGGCTGGGTGCTGACGGGCGCGAAGGGTGTTGTCGACCAGGCCGCTCAG
GCAGCGTTCTTCGTCGTCAGCGCGCGTGTGTCGGGTCACGACGACGATGCGGCCGGCATCGGCCTGTTCGTCGTGCCGGC
CGACGCGCCGGGCGTGTCGCTGCGCGACTACAAAAAGATCGACGGCGGCCGCGCGGCCGAAGTGCGCTTCGAGCGCGTCG
CGCTGCCGGCCGATGCCGCGCTCGGCGCGCACGATGGTGAAGCGGGCACCGAGCTGCTCGAACGCGTGCTCGGCTACGGG
CTGCTCGCACTGTCGGCGGAGGCGCTCGGCGCGATGGACGTCGCGAAGGAGTACACGCTCGACTACCTGCGCACGCGCAA
GCAGTTCGGCTTGCCGATCGGCAGCTTCCAGGCGCTGCAGCACCGGATGTCCGACCTGCTGCTCGAAGTCGAGCAGGCGC
GCTCGGCCGTGATCAACGCGGCCGCGCAGCTCGATGCGCCGCGCGCGGTGCGCGAACGCGTGCTGGCGGCGGCGAAGGTC
ACGATCGGCCGGATCGGCACGCTCGTTGCCGAGGAGAGCATCCAGTTGCACGGCGGGATCGGGATGACGTGGGAGCTGCC
GCTGTCGCACTACGCGAAGCGCCTCGTGATGATCGATCACCAGCTCGGCGACGAGGATCACCATCTCGCGCGCTACATCG
CGCTGTCGAAACAGTAA

Upstream 100 bases:

>100_bases
ATTTCAACAACCGGAAGCTGTCGATCTTCGGCGGCTCGAACGAGATCCAGAAGAACATCATCGCGAAGATGATGCTCGGG
CTGTAACGAGGGACGCGACG

Downstream 100 bases:

>100_bases
AAGCAAATCACGCGAATGGAGGAGACAAGGATGACGAACGAATCGCGCGCATTGCCGCTGGCCGGCGTGAAGGTGCTCGA
TTTCTCGCGCGTGCTCGCGG

Product: Acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFPEADGGFGGAGFDIAVVFECLGR
GLVVEPFLGALLAGRALSLAGGAAHRDRLAALIDGSASAAFAHDEPGSHYELTTVRTRAERSSDGWVLTGAKGVVDQAAQ
AAFFVVSARVSGHDDDAAGIGLFVVPADAPGVSLRDYKKIDGGRAAEVRFERVALPADAALGAHDGEAGTELLERVLGYG
LLALSAEALGAMDVAKEYTLDYLRTRKQFGLPIGSFQALQHRMSDLLLEVEQARSAVINAAAQLDAPRAVRERVLAAAKV
TIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDHQLGDEDHHLARYIALSKQ

Sequences:

>Translated_378_residues
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFPEADGGFGGAGFDIAVVFECLGR
GLVVEPFLGALLAGRALSLAGGAAHRDRLAALIDGSASAAFAHDEPGSHYELTTVRTRAERSSDGWVLTGAKGVVDQAAQ
AAFFVVSARVSGHDDDAAGIGLFVVPADAPGVSLRDYKKIDGGRAAEVRFERVALPADAALGAHDGEAGTELLERVLGYG
LLALSAEALGAMDVAKEYTLDYLRTRKQFGLPIGSFQALQHRMSDLLLEVEQARSAVINAAAQLDAPRAVRERVLAAAKV
TIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDHQLGDEDHHLARYIALSKQ
>Mature_378_residues
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFPEADGGFGGAGFDIAVVFECLGR
GLVVEPFLGALLAGRALSLAGGAAHRDRLAALIDGSASAAFAHDEPGSHYELTTVRTRAERSSDGWVLTGAKGVVDQAAQ
AAFFVVSARVSGHDDDAAGIGLFVVPADAPGVSLRDYKKIDGGRAAEVRFERVALPADAALGAHDGEAGTELLERVLGYG
LLALSAEALGAMDVAKEYTLDYLRTRKQFGLPIGSFQALQHRMSDLLLEVEQARSAVINAAAQLDAPRAVRERVLAAAKV
TIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDHQLGDEDHHLARYIALSKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=356, Percent_Identity=28.0898876404494, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI226958412, Length=359, Percent_Identity=28.4122562674095, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI4501857, Length=359, Percent_Identity=25.3481894150418, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI226958414, Length=338, Percent_Identity=28.1065088757396, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI7656849, Length=323, Percent_Identity=26.9349845201238, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI4557231, Length=361, Percent_Identity=26.5927977839335, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI187960098, Length=361, Percent_Identity=26.5927977839335, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI4501859, Length=354, Percent_Identity=25.1412429378531, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI21361497, Length=385, Percent_Identity=25.4545454545455, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI4557235, Length=360, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI76496475, Length=360, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI87081958, Length=367, Percent_Identity=24.7956403269755, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786223, Length=363, Percent_Identity=22.8650137741047, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71985184, Length=375, Percent_Identity=30.1333333333333, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=366, Percent_Identity=28.1420765027322, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=363, Percent_Identity=27.5482093663912, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17534899, Length=360, Percent_Identity=26.1111111111111, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17569725, Length=361, Percent_Identity=26.3157894736842, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=340, Percent_Identity=29.1176470588235, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=341, Percent_Identity=27.5659824046921, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=359, Percent_Identity=26.4623955431755, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=262, Percent_Identity=27.4809160305344, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=332, Percent_Identity=24.3975903614458, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355753, Length=360, Percent_Identity=28.3333333333333, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21356377, Length=360, Percent_Identity=26.9444444444444, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24666513, Length=358, Percent_Identity=25.1396648044693, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24660351, Length=361, Percent_Identity=27.4238227146814, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24646207, Length=357, Percent_Identity=26.890756302521, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281363737, Length=353, Percent_Identity=24.3626062322946, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40515; Mature: 40515

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFPEA
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
DGGFGGAGFDIAVVFECLGRGLVVEPFLGALLAGRALSLAGGAAHRDRLAALIDGSASAA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCEE
FAHDEPGSHYELTTVRTRAERSSDGWVLTGAKGVVDQAAQAAFFVVSARVSGHDDDAAGI
ECCCCCCCCEEEEEEHHHHCCCCCCEEEECCCHHHHHHHHHHEEEEEEEECCCCCCCCCE
GLFVVPADAPGVSLRDYKKIDGGRAAEVRFERVALPADAALGAHDGEAGTELLERVLGYG
EEEEEECCCCCCCHHHHHHCCCCCCHHEEEEHEECCCHHHCCCCCCHHHHHHHHHHHCCH
LLALSAEALGAMDVAKEYTLDYLRTRKQFGLPIGSFQALQHRMSDLLLEVEQARSAVINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQLDAPRAVRERVLAAAKVTIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDH
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHHEEH
QLGDEDHHLARYIALSKQ
HCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDFQHTEDRRMLADTLNRFIAEQYAFPVRDRIAQSAEGFDRAMWQRFAELGTVGALFPEA
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
DGGFGGAGFDIAVVFECLGRGLVVEPFLGALLAGRALSLAGGAAHRDRLAALIDGSASAA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCEE
FAHDEPGSHYELTTVRTRAERSSDGWVLTGAKGVVDQAAQAAFFVVSARVSGHDDDAAGI
ECCCCCCCCEEEEEEHHHHCCCCCCEEEECCCHHHHHHHHHHEEEEEEEECCCCCCCCCE
GLFVVPADAPGVSLRDYKKIDGGRAAEVRFERVALPADAALGAHDGEAGTELLERVLGYG
EEEEEECCCCCCCHHHHHHCCCCCCHHEEEEHEECCCHHHCCCCCCHHHHHHHHHHHCCH
LLALSAEALGAMDVAKEYTLDYLRTRKQFGLPIGSFQALQHRMSDLLLEVEQARSAVINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQLDAPRAVRERVLAAAKVTIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVMIDH
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHHEEH
QLGDEDHHLARYIALSKQ
HCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]