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The map label for this gene is yngJ [H]

Identifier: 78067689

GI number: 78067689

Start: 3376599

End: 3377807

Strand: Reverse

Name: yngJ [H]

Synonym: Bcep18194_A6220

Alternate gene names: 78067689

Gene position: 3377807-3376599 (Counterclockwise)

Preceding gene: 78067690

Following gene: 78067688

Centisome position: 91.44

GC content: 67.0

Gene sequence:

>1209_bases
ATGGACCTCAATTTCACTCCTGAAGAGGAAGCCTTCCGCACGGAAGTGCAGCGCTTCCTGCAAGCCGAACTGCCCGCGCG
CATCGCGCGCCAGGTGAAGGGCGGCCTGCATCTCACGCGCGACGACATGCGCGAATGGCATGCCATCCTCAACGCGCGCG
GCTGGCTCGCGAGCCACTGGCCGCGCGAATACGGCGGCCCTGGCTGGAGCGTCGCGCAGAAGTTCCTGTTCGACAACGAA
TGCGCGCTCGCGGGTGCGCCGCGCATCGTGCCGTTCGGCGTGAACATGCTCGGCCCCGTGCTGATCAAGTACGGCAACGA
AGCGCAGCAGCGCCACTGGCTGCCGCGCATCCTCGACGGCACCGACTGGTGGTGCCAGGGCTACTCGGAGCCAGGCGCCG
GTTCCGACCTCGCGGCGGTGAAGACGACCGCGGTGCGCGGCATCGACGCGCAAGGCGAGCACTACCTCGTGAACGGCCAG
AAGACGTGGACCACGCTCGGCCACTACGCGAACATGATCTTCTGCCTCGTGCGCACCGCGACCGACGTGCGCAAGCAGGA
AGGCATCAGCTTCCTGCTGATCGACATGAACACGCCGGGTGTCGAAGTGCGCCCGATCATCACGCTCGACGGCGAGCACG
AGGTGAACGAGGTGTTCTTCACCGACGTGCGCGTGCCGGCGGCCAACCTCGTCGGCGAAGAGAACCGCGGCTGGACCTAC
GCGAAATACTTGCTCACGTACGAGCGCACCAACATCGCCGGAATCGGCTTCTCGACGGCCGCGCTCGACCGGCTGCGCGC
GGTGGCCGCGAAGGTCAAGAAGAACGGCCGGCCGCTCGCGGACGATCCGTTCTTCGCGGCGCGCGTCGCGCGGGTCGAGA
TCGAACTCGAGAACATGCGCACGACGAACCTGCGCGTGCTGGCCGCGGTCGCGGGCGGCGGCGCGCCCGGTGCGGAAAGC
TCGATGCTGAAGATTCGCGGCACGCAGATCCGCCAGGAGATCACCGCGCTGATGCGCCGCGCGATGGGGCCGTACGCGCA
GCCGTTCGTCGAGGAAGCACTCGACGGCGACTACGACGGCGAGCCGGTCGGCCCGGACGAAGCCGCGAGCGCCGCGCAGC
AGTATTTCAACAACCGGAAGCTGTCGATCTTCGGCGGCTCGAACGAGATCCAGAAGAACATCATCGCGAAGATGATGCTC
GGGCTGTAA

Upstream 100 bases:

>100_bases
AGCCGTCGCCGCTGCTCGTCGATCTCGTCGCGCGCGGCGCGGATTTCGCGAGCCTGAACCGCATCGACTGAACGCCCACC
GCATTCGCCACGGACCGAAG

Downstream 100 bases:

>100_bases
CGAGGGACGCGACGATGGATTTCCAGCACACAGAAGACCGCCGGATGCTGGCGGATACGTTGAACCGCTTCATCGCCGAA
CAGTACGCGTTCCCGGTGCG

Product: Acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDLNFTPEEEAFRTEVQRFLQAELPARIARQVKGGLHLTRDDMREWHAILNARGWLASHWPREYGGPGWSVAQKFLFDNE
CALAGAPRIVPFGVNMLGPVLIKYGNEAQQRHWLPRILDGTDWWCQGYSEPGAGSDLAAVKTTAVRGIDAQGEHYLVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPAANLVGEENRGWTY
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVKKNGRPLADDPFFAARVARVEIELENMRTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEITALMRRAMGPYAQPFVEEALDGDYDGEPVGPDEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMML
GL

Sequences:

>Translated_402_residues
MDLNFTPEEEAFRTEVQRFLQAELPARIARQVKGGLHLTRDDMREWHAILNARGWLASHWPREYGGPGWSVAQKFLFDNE
CALAGAPRIVPFGVNMLGPVLIKYGNEAQQRHWLPRILDGTDWWCQGYSEPGAGSDLAAVKTTAVRGIDAQGEHYLVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPAANLVGEENRGWTY
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVKKNGRPLADDPFFAARVARVEIELENMRTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEITALMRRAMGPYAQPFVEEALDGDYDGEPVGPDEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMML
GL
>Mature_402_residues
MDLNFTPEEEAFRTEVQRFLQAELPARIARQVKGGLHLTRDDMREWHAILNARGWLASHWPREYGGPGWSVAQKFLFDNE
CALAGAPRIVPFGVNMLGPVLIKYGNEAQQRHWLPRILDGTDWWCQGYSEPGAGSDLAAVKTTAVRGIDAQGEHYLVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPAANLVGEENRGWTY
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVKKNGRPLADDPFFAARVARVEIELENMRTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEITALMRRAMGPYAQPFVEEALDGDYDGEPVGPDEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMML
GL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=267, Percent_Identity=29.2134831460674, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4501859, Length=406, Percent_Identity=26.3546798029557, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI226958414, Length=234, Percent_Identity=30.3418803418803, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI187960098, Length=328, Percent_Identity=26.219512195122, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4557231, Length=328, Percent_Identity=26.219512195122, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4501857, Length=404, Percent_Identity=24.009900990099, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI48976061, Length=340, Percent_Identity=27.3529411764706, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI211971008, Length=340, Percent_Identity=27.3529411764706, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4557233, Length=357, Percent_Identity=28.0112044817927, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI7656849, Length=315, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI38505218, Length=239, Percent_Identity=29.2887029288703, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI4557235, Length=178, Percent_Identity=29.7752808988764, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI76496475, Length=178, Percent_Identity=29.7752808988764, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI21361497, Length=213, Percent_Identity=24.8826291079812, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI87081958, Length=311, Percent_Identity=25.4019292604502, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786223, Length=328, Percent_Identity=23.1707317073171, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17570075, Length=414, Percent_Identity=24.8792270531401, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=332, Percent_Identity=25.9036144578313, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=416, Percent_Identity=25.9615384615385, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=385, Percent_Identity=25.7142857142857, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=303, Percent_Identity=25.0825082508251, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=25.531914893617, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=239, Percent_Identity=29.7071129707113, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=356, Percent_Identity=26.685393258427, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=214, Percent_Identity=28.0373831775701, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=269, Percent_Identity=24.907063197026, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=173, Percent_Identity=28.9017341040462, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71985192, Length=173, Percent_Identity=28.9017341040462, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562446, Length=275, Percent_Identity=26.1818181818182, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17533517, Length=392, Percent_Identity=24.234693877551, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21355753, Length=301, Percent_Identity=26.9102990033223, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21356377, Length=355, Percent_Identity=26.7605633802817, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24660351, Length=262, Percent_Identity=28.2442748091603, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24666513, Length=248, Percent_Identity=26.6129032258064, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281363737, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24646207, Length=359, Percent_Identity=26.1838440111421, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44565; Mature: 44565

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNFTPEEEAFRTEVQRFLQAELPARIARQVKGGLHLTRDDMREWHAILNARGWLASHW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREYGGPGWSVAQKFLFDNECALAGAPRIVPFGVNMLGPVLIKYGNEAQQRHWLPRILDG
CHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHCCCHHHCCC
TDWWCQGYSEPGAGSDLAAVKTTAVRGIDAQGEHYLVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPAANLVGEENRGWTY
HHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCEEE
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVKKNGRPLADDPFFAARVARVEIELENMR
EHEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEEEECCCC
TTNLRVLAAVAGGGAPGAESSMLKIRGTQIRQEITALMRRAMGPYAQPFVEEALDGDYDG
CCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
EPVGPDEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMMLGL
CCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLNFTPEEEAFRTEVQRFLQAELPARIARQVKGGLHLTRDDMREWHAILNARGWLASHW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREYGGPGWSVAQKFLFDNECALAGAPRIVPFGVNMLGPVLIKYGNEAQQRHWLPRILDG
CHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHCCCHHHCCC
TDWWCQGYSEPGAGSDLAAVKTTAVRGIDAQGEHYLVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLIDMNTPGVEVRPIITLDGEHEVNEVFFTDVRVPAANLVGEENRGWTY
HHHHHHCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHCCCCCCCEEE
AKYLLTYERTNIAGIGFSTAALDRLRAVAAKVKKNGRPLADDPFFAARVARVEIELENMR
EHEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEEEECCCC
TTNLRVLAAVAGGGAPGAESSMLKIRGTQIRQEITALMRRAMGPYAQPFVEEALDGDYDG
CCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
EPVGPDEAASAAQQYFNNRKLSIFGGSNEIQKNIIAKMMLGL
CCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]