| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yieH [H]
Identifier: 78067484
GI number: 78067484
Start: 3149958
End: 3150644
Strand: Direct
Name: yieH [H]
Synonym: Bcep18194_A6015
Alternate gene names: 78067484
Gene position: 3149958-3150644 (Clockwise)
Preceding gene: 78067483
Following gene: 78067489
Centisome position: 85.27
GC content: 66.81
Gene sequence:
>687_bases ATGCTCGATCACCTCATCTGCGACTGCGACGGCGTGCTCGTCGACAGCGAAGTCATCGCCGACCGCGTCCTGCTCGACAC GCTGTCCGCCACGTTCCCGAATCTCGATTTCGAAGCCGCCGCCAAGTCGGCGTTCGGCCAGCAGACGTCGCGCTTCCTGG CGGGAATCGAATCCCGCTTCGGGATCGAGATGCCGGCCAACTTCATCGAGACCATCGAGCACAACATCGAGAGCGCGCTG GCGCAATCGCTCGCGCCGATCTCCGGCGTGCGCGACGCGCTGCTGAAGGTGAGCCTGCCGGTGGCCGTCGTGTCGAACAG CCGGCTCGCGCGCGTGCGCAGCTCGCTGAAGCGTGCGTCGCTCACCGAGATCTTCGGCGATCGCGTGTTCAGTTCCGAGC AGGTGGCGCGTCCGAAGCCCTACCCCGATGTGTACCTGCACGCGGCGCACACGCTCGGCGTCGCGCCGGAGCGCTGCATC GTCGTCGAGGACAGCGTGTCGGGGTTGAATGCCGCACGTGCGGCGGGCATGAAGACGATCGCGTTCGTCGGCGCGAGCCA CATCCCCGACAACTACGCGGACGCGCTGCGCGCGATGGGCATCACGCGAATCATGCGCAAGATGGACGAACTGCCGGCGT TCGTCGAAGCCGGCATGCGCGGCGAATTCGGCGACGTGCAGTCCTGA
Upstream 100 bases:
>100_bases CGCATCGGGAAAATTTGCCGAAGCGTCGCGCGGCGTCGGCGTGAAAACACGTATGATGGCGAATTGATCTGCGTCGCCGA CATCCCGCTTTTTCACCACC
Downstream 100 bases:
>100_bases TGCTTTTGACGGCCCGACCAGGCTGATCGGGCCGATCCGGCGTGCGCCGGTTCACGCACGCCGTGCCACGGGCGCGAACG CGCCCGCCTTCCTTTCCCTC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLAGIESRFGIEMPANFIETIEHNIESAL AQSLAPISGVRDALLKVSLPVAVVSNSRLARVRSSLKRASLTEIFGDRVFSSEQVARPKPYPDVYLHAAHTLGVAPERCI VVEDSVSGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPAFVEAGMRGEFGDVQS
Sequences:
>Translated_228_residues MLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLAGIESRFGIEMPANFIETIEHNIESAL AQSLAPISGVRDALLKVSLPVAVVSNSRLARVRSSLKRASLTEIFGDRVFSSEQVARPKPYPDVYLHAAHTLGVAPERCI VVEDSVSGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPAFVEAGMRGEFGDVQS >Mature_228_residues MLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLAGIESRFGIEMPANFIETIEHNIESAL AQSLAPISGVRDALLKVSLPVAVVSNSRLARVRSSLKRASLTEIFGDRVFSSEQVARPKPYPDVYLHAAHTLGVAPERCI VVEDSVSGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPAFVEAGMRGEFGDVQS
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=181, Percent_Identity=29.8342541436464, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788021, Length=181, Percent_Identity=32.0441988950276, Blast_Score=70, Evalue=1e-13, Organism=Drosophila melanogaster, GI20129151, Length=245, Percent_Identity=28.1632653061224, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24563; Mature: 24563
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLAGIESRF CCCCEEECCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GIEMPANFIETIEHNIESALAQSLAPISGVRDALLKVSLPVAVVSNSRLARVRSSLKRAS CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHH LTEIFGDRVFSSEQVARPKPYPDVYLHAAHTLGVAPERCIVVEDSVSGLNAARAAGMKTI HHHHHHHHHCCCCCCCCCCCCCHHEEEHHHHHCCCCCEEEEEECCCCCHHHHHHHCHHHH AFVGASHIPDNYADALRAMGITRIMRKMDELPAFVEAGMRGEFGDVQS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLAGIESRF CCCCEEECCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GIEMPANFIETIEHNIESALAQSLAPISGVRDALLKVSLPVAVVSNSRLARVRSSLKRAS CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHH LTEIFGDRVFSSEQVARPKPYPDVYLHAAHTLGVAPERCIVVEDSVSGLNAARAAGMKTI HHHHHHHHHCCCCCCCCCCCCCHHEEEHHHHHCCCCCEEEEEECCCCCHHHHHHHCHHHH AFVGASHIPDNYADALRAMGITRIMRKMDELPAFVEAGMRGEFGDVQS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]