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The map label for this gene is glxA [H]

Identifier: 78067412

GI number: 78067412

Start: 3071613

End: 3072629

Strand: Direct

Name: glxA [H]

Synonym: Bcep18194_A5943

Alternate gene names: 78067412

Gene position: 3071613-3072629 (Clockwise)

Preceding gene: 78067410

Following gene: 78067419

Centisome position: 83.15

GC content: 73.16

Gene sequence:

>1017_bases
ATGACCGCCGCCGCCTCGTCCACCCGGCCCGCCCCGCCCGTTCCGACCGTCGTTGCCGTGATCGCGTACGACGGCATCAG
CCCGTTCCACCTGTCGGTGCCGTCGGTCGTGTTCGGCAAGGAGCGCGACGCGGCCGCATCGCCCGCGTTCGAGTTTCGCG
TCTGCTCGGCCGAACGTGGCCCGCTGTCGACGACGGGCGGCTTCACGATCACCGCGCCATACGGGCTCGACGGGCTCGAC
GATGCGGACATCGTCATCGTGCCGGCATGGCGCGATCCGGACGAAGCGCCGCCCGACGTGCTGCTCGACGCCGTCCGCGC
GGTCGCCGCGCGTGGCGCGCAGCTCGTCGGGCTGTGCCTCGGCGCCTATGTGCTCGCCGCGGCCGGCCTGCTCGACGGCC
GCCCGGCCACCACGCACTGGGCATGGGCCGACGACTTCGCGCGACGCTTTCCGCGCGTGAAGCTCGACCCGGACGTGCTG
TACGTGGACGACGGCAACCTGATGACGTCGGCCGGCACGGCAGCCGGGCTCGACTGCTGCCTGCACGTCGTCCGGCTGCG
CTTCGGCTCGGACGCCGCGAACCAGATCGCGCGCCGCCTCGTGATCCCGCCGCATCGCCAGGGCGGGCAGGCGCAATACG
TGCCGCAGCCGGTCGCCGCGCATCCGCGCGATGCACGGCTCGCGGGCCTGCTCGACTGGGTGCGCGCCCACCTCGACGCC
GCACACAGCGTCGACTCGCTCGCCGAACGCGTGCTGATGAGCCGGCGCACGTTCACGCGCCACTTCCGCCAGGCGACCGG
CACGACCGTCACCGCGTGGCTGCAGGCCGAGCGGCTCGCGCGCGCGCAGCATCTGCTGGAAACCACCGGGCAATCGATCG
ATGCGATCGCGCAGGCAGCCGGCTACGGGTCGAGCGTGTCGCTGCGCCAGCATTTCGCGGGCGCGCTCGGCACGTCGCCG
TCGGCATACCGAAGGGAATTTCGCGGCGCCGGAGCCGGCGCCGAGGTCGTGCGGTAA

Upstream 100 bases:

>100_bases
GGCGCGATGCGATGCATTGTCGGTGCGCATCGTTCACCGGGACAGTGGCCCGATAGCCATTCTTCGATAGAATCGGGCCA
TCGCCATTCCGGAGCCCGCC

Downstream 100 bases:

>100_bases
CGCGCGCGGCGAGCACGTCTCGCCGCGGAACCGGCCGGTCGCTCAGCCGCCGTTGATCCAGCGTGCCGCGTACAGCAGCA
GCGCGATGAAGACGATCATC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTAAASSTRPAPPVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERGPLSTTGGFTITAPYGLDGLD
DADIVIVPAWRDPDEAPPDVLLDAVRAVAARGAQLVGLCLGAYVLAAAGLLDGRPATTHWAWADDFARRFPRVKLDPDVL
YVDDGNLMTSAGTAAGLDCCLHVVRLRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDA
AHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALGTSP
SAYRREFRGAGAGAEVVR

Sequences:

>Translated_338_residues
MTAAASSTRPAPPVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERGPLSTTGGFTITAPYGLDGLD
DADIVIVPAWRDPDEAPPDVLLDAVRAVAARGAQLVGLCLGAYVLAAAGLLDGRPATTHWAWADDFARRFPRVKLDPDVL
YVDDGNLMTSAGTAAGLDCCLHVVRLRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDA
AHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALGTSP
SAYRREFRGAGAGAEVVR
>Mature_337_residues
TAAASSTRPAPPVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERGPLSTTGGFTITAPYGLDGLDD
ADIVIVPAWRDPDEAPPDVLLDAVRAVAARGAQLVGLCLGAYVLAAAGLLDGRPATTHWAWADDFARRFPRVKLDPDVLY
VDDGNLMTSAGTAAGLDCCLHVVRLRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDAA
HSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALGTSPS
AYRREFRGAGAGAEVVR

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35857; Mature: 35726

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAASSTRPAPPVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERG
CCCCCCCCCCCCCCHHHHHEEECCCCCCCEECCCHHEECCCCCCCCCCCEEEEEECCCCC
PLSTTGGFTITAPYGLDGLDDADIVIVPAWRDPDEAPPDVLLDAVRAVAARGAQLVGLCL
CCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
GAYVLAAAGLLDGRPATTHWAWADDFARRFPRVKLDPDVLYVDDGNLMTSAGTAAGLDCC
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEECCCEEEEECCCEEECCCCHHHHHHH
LHVVRLRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDA
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GYGSSVSLRQHFAGALGTSPSAYRREFRGAGAGAEVVR
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCC
>Mature Secondary Structure 
TAAASSTRPAPPVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERG
CCCCCCCCCCCCCHHHHHEEECCCCCCCEECCCHHEECCCCCCCCCCCEEEEEECCCCC
PLSTTGGFTITAPYGLDGLDDADIVIVPAWRDPDEAPPDVLLDAVRAVAARGAQLVGLCL
CCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
GAYVLAAAGLLDGRPATTHWAWADDFARRFPRVKLDPDVLYVDDGNLMTSAGTAAGLDCC
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEECCCEEEEECCCEEECCCCHHHHHHH
LHVVRLRFGSDAANQIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAHLDA
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GYGSSVSLRQHFAGALGTSPSAYRREFRGAGAGAEVVR
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]