| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is dalD [H]
Identifier: 78067385
GI number: 78067385
Start: 3038278
End: 3039672
Strand: Direct
Name: dalD [H]
Synonym: Bcep18194_A5916
Alternate gene names: 78067385
Gene position: 3038278-3039672 (Clockwise)
Preceding gene: 78067384
Following gene: 78067386
Centisome position: 82.25
GC content: 70.82
Gene sequence:
>1395_bases ATGAGCGCATCGCCCTCCGCCCGCACGCCCGTGCTGCTGCACATCGGCGCGGGCTCGTTTCACCGCGCGCACCAAGCGTG GTATCTGCATCGCGTGAACGCGGCCGTCCCGGCCGACGAGCGCTGGTCGCTGACCGTCGGCAACATCCGCGACGACATGC ACGCGACGATGGACGCGCTCGCCGCGCAGCACGGCGCCTACACGCTCGAAACCGTCACGCCGCAAGGCGAGCGCGCGTAC GAGACGATCCGCGCGATCACGCGCGTGCTGCCGTGGTCGATCGACCTCGCCGCGCTGATCGATGCCGGCGCCGATCCGGA CTGCCGGATCGTGTCGTTCACCGTCACGGAAGGCGGCTACTACCTCGACGAACACAACCGGCTCGACCTCGCGAACGCCG ATCTCGCGGCCGACCTGCAGGGCGCGCGCACGACGCTGTACGGCGCGCTCGCGGCGCTGCTCGCCGAACGCGTGACCCGC GGCGCGGGCCCGCTCACGCTGCAGAGCTGCGACAACCTGCGCAACAACGGCGCGCGCTTTCGTGCGGGAATGCGTGAATT CCTCGAACGGCGCGGACAGGCCGACCTGCTCGCATGGTTCGATGCGAACGTTGCGACACCCAGCGCGATGGTCGACCGCA TCACGCCGCGCCCGACCGCCGACGTGCGCGAGCGCGTGCTGGCGGCCACCGGCGTCGACGACGCGTGCCCGGTAATGGGC GAATCGTTCATCCAGTGGGTGATCGAAGACCGCTTTGCGGCCGGCCGGCCGCGCTGGGAGCTGGCCGGCGCCGAACTCGT CGACGACGTGCACCCGTACGAGGAAGCGAAGATCCGCATCCTCAACGCGACGCACAGCTGCATCGCGTGGGCCGGCACGC TCGCGGGCCACACGTATATCCACGAAGGCACGCACGACGCGGCGATCCGCCGCTTCGCGCACGACTACGTGACGCAGGAC GTGATCCCCTGCCTCACGCCGAGCCCGCTCGATCTCGCGCGCTACCGCGACGTCGTGCTCGAACGCTTCGGCAACCCGTA CGTGCTGGACACGAACCAGCGCGTCGCGGCCGACGGCTTCTCGAAGATCCCCGGCTTCATCGCGCCGACGCTCGCCGAAT CGTTCGCACGCGGCGCATCGCCGATCGCGACCGCCGTGCTGCCCGCGCTGTTCCTGCGCTTTCTCGAACGCTGGGCGCGC GGCGCGCTGCCGTATGCGTACCAGGACGGCGTGATGGACGAAAGCGCTGCACGGGCGATCGTCGGCGCCACCGACCCCGT CGTCGCGCTGTGCGCGAACCGGCAGCTGTGGGGCTCGCTCGCCGGCAACGCGGCGCTGTTCGAGGCCATCCGCGGCGGAC TCTGGCGCGTCGACGCATGGCTCGCGGCACGCTGA
Upstream 100 bases:
>100_bases CCCGCCTTGACTTTCGCTCGCCCGAATACGATCATTCGCTCACACAAAGAGCAAATGATCGTATTCGACAGGACAGTCAG GCACGAACAGGAGACCCCGG
Downstream 100 bases:
>100_bases CGCGCATCCGGGCGAACCTGCCTTGGCACGGGCGCGGCCGCGCGGCTAAAGTAGCGACTCCCCACTGACGGAACGGATCG CTCATGTATCTCGGCATCGA
Product: mannitol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSASPSARTPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMHATMDALAAQHGAYTLETVTPQGERAY ETIRAITRVLPWSIDLAALIDAGADPDCRIVSFTVTEGGYYLDEHNRLDLANADLAADLQGARTTLYGALAALLAERVTR GAGPLTLQSCDNLRNNGARFRAGMREFLERRGQADLLAWFDANVATPSAMVDRITPRPTADVRERVLAATGVDDACPVMG ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYIHEGTHDAAIRRFAHDYVTQD VIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTLAESFARGASPIATAVLPALFLRFLERWAR GALPYAYQDGVMDESAARAIVGATDPVVALCANRQLWGSLAGNAALFEAIRGGLWRVDAWLAAR
Sequences:
>Translated_464_residues MSASPSARTPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMHATMDALAAQHGAYTLETVTPQGERAY ETIRAITRVLPWSIDLAALIDAGADPDCRIVSFTVTEGGYYLDEHNRLDLANADLAADLQGARTTLYGALAALLAERVTR GAGPLTLQSCDNLRNNGARFRAGMREFLERRGQADLLAWFDANVATPSAMVDRITPRPTADVRERVLAATGVDDACPVMG ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYIHEGTHDAAIRRFAHDYVTQD VIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTLAESFARGASPIATAVLPALFLRFLERWAR GALPYAYQDGVMDESAARAIVGATDPVVALCANRQLWGSLAGNAALFEAIRGGLWRVDAWLAAR >Mature_463_residues SASPSARTPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMHATMDALAAQHGAYTLETVTPQGERAYE TIRAITRVLPWSIDLAALIDAGADPDCRIVSFTVTEGGYYLDEHNRLDLANADLAADLQGARTTLYGALAALLAERVTRG AGPLTLQSCDNLRNNGARFRAGMREFLERRGQADLLAWFDANVATPSAMVDRITPRPTADVRERVLAATGVDDACPVMGE SFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYIHEGTHDAAIRRFAHDYVTQDV IPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTLAESFARGASPIATAVLPALFLRFLERWARG ALPYAYQDGVMDESAARAIVGATDPVVALCANRQLWGSLAGNAALFEAIRGGLWRVDAWLAAR
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=358, Percent_Identity=36.3128491620112, Blast_Score=211, Evalue=7e-56, Organism=Escherichia coli, GI1787823, Length=365, Percent_Identity=36.7123287671233, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI1790779, Length=361, Percent_Identity=35.1800554016621, Blast_Score=197, Evalue=9e-52, Organism=Escherichia coli, GI48994885, Length=425, Percent_Identity=25.4117647058824, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1790028, Length=367, Percent_Identity=24.2506811989101, Blast_Score=75, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6324401, Length=422, Percent_Identity=37.4407582938389, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6320765, Length=422, Percent_Identity=37.4407582938389, Blast_Score=264, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.11 [H]
Molecular weight: Translated: 50591; Mature: 50459
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPSARTPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMHATMDAL CCCCCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEECCHHHHHHHHHHHH AAQHGAYTLETVTPQGERAYETIRAITRVLPWSIDLAALIDAGADPDCRIVSFTVTEGGY HHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEEECCCE YLDEHNRLDLANADLAADLQGARTTLYGALAALLAERVTRGAGPLTLQSCDNLRNNGARF EECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHH RAGMREFLERRGQADLLAWFDANVATPSAMVDRITPRPTADVRERVLAATGVDDACPVMG HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHH ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYI HHHHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEE HEGTHDAAIRRFAHDYVTQDVIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGF ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCH SKIPGFIAPTLAESFARGASPIATAVLPALFLRFLERWARGALPYAYQDGVMDESAARAI HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHH VGATDPVVALCANRQLWGSLAGNAALFEAIRGGLWRVDAWLAAR HCCCCCHHHHHCCCHHHHHHCCHHHHHHHHHCCCEEEHHHHCCC >Mature Secondary Structure SASPSARTPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMHATMDAL CCCCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEECCHHHHHHHHHHHH AAQHGAYTLETVTPQGERAYETIRAITRVLPWSIDLAALIDAGADPDCRIVSFTVTEGGY HHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEEECCCE YLDEHNRLDLANADLAADLQGARTTLYGALAALLAERVTRGAGPLTLQSCDNLRNNGARF EECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHH RAGMREFLERRGQADLLAWFDANVATPSAMVDRITPRPTADVRERVLAATGVDDACPVMG HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHH ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYI HHHHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEE HEGTHDAAIRRFAHDYVTQDVIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGF ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCH SKIPGFIAPTLAESFARGASPIATAVLPALFLRFLERWARGALPYAYQDGVMDESAARAI HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHH VGATDPVVALCANRQLWGSLAGNAALFEAIRGGLWRVDAWLAAR HCCCCCHHHHHCCCHHHHHHCCHHHHHHHHHCCCEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]