| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fatA [H]
Identifier: 78066920
GI number: 78066920
Start: 2526857
End: 2529328
Strand: Reverse
Name: fatA [H]
Synonym: Bcep18194_A5451
Alternate gene names: 78066920
Gene position: 2529328-2526857 (Counterclockwise)
Preceding gene: 78066921
Following gene: 78066919
Centisome position: 68.47
GC content: 68.81
Gene sequence:
>2472_bases ATGGCGTTCCGCCGGTTTTCCCCGTCTGCAGCCTCCCGTCCCGCCAACCGGCCCGTACGCCGCCGCGCCGCGTCGCGCGC GTTCGAACCGGCGCTTGCCGCCGCGTTGGCGCTTGCGATGCCGATCGGCGCGCAAGCGCAGCCCGACGATCCGCCGTCGC GCGTCGACACCGACGAGCGGCGCGCGTATGCGATTCCGGCCGGCGCGCTCGACGTCGTGCTGAATCGCTACGCGGTGGCG GCAGGCGTCGAACTGGCGAGCGACGCAGCACTCACGCAGCATCTCGCGAGCGACGGGTTGAACGCTCGCGTGGGCGTCGC GGAAGGTTTCGCACGCCTGCTCGCGCCGCACGGGCTCGAGGCTGTGCGCACCGGCGGCGGTTACCTCGTGCGGCGCCGCG CGTCGGCCGTGCCGGCCGCGGCGGGCGCCGGCGCGACGTTGCCGACGATCGTCGTGAATGCGCGTGCGGGGGCGTTGCCC GAGGCGTACACTGGCGGTCAGGTCGCGCGCGGGGGCCGGCTCGGCATGCTCGGCAACGCCGACTTCATGGATGCGCCGTT CAACATCACGAGCTATACCTCGGCGCTGATCGAGAACCAGCAGGCCGGTACCGTCGCCGACGTGCTGGAGAACGATCCGT CGGTGCGTTTCACGACGTCGACCGGCCACATCGTCGAGAACTACACGATCCGCGGCTTCAACGTGATCGCCGACGATCTC GCGTTCAACGGGATGTACGGGCTCGCGCCATACGGTCACTCGCCCACCGAATTCATCGAGCGCATCGAAGTGCTGAAAGG GCCGAACGCGTTGCTGAACGGCATCTCGCCGAGCGGCGGCGTCGGCGGTGCGATCAACCTCGTCCCGAAGCGGGCGGGCG ATACGCCGCTCGCGCGGCTCACCACCGACTACATCTCGGACGGCCAGTTCGGCGTGCACGCCGATCTCGGCCGGCGCTTC GGCGACAGAAACCAGGTCGGCATCCGCGTGAACGGCGCGTATCGCGACGGCCGCACGACGATGGACGGGCAGAACAAGAA GCGCGAGTTCGCGTCGCTCGCGTTCGACGTGAAAGGCGAGCGTGCGCGTTTTTCGCTCGATGCCTATACGGACACCGAAC GTTTCGACAACGGCAGCCCGTGGATGGCATCGTTCGCGAGCCAGGTCGTGAGCCCGCCGTCGCCCGGCACGAACCTGCTG CGCGGCGCATGGGGCAAGCTCGACAACCAGGCCGTCGTCGCGCGCGGCGAACTCGACCTGACCGACCGGATTACCGCGTA CGCGGGGATCGGCGGCCTCAGCTATCGCTACGCGGGTTTCATCAACGGGACGCGGGCCGGCGCGATCCAGCCGAACGGCA ACTATCGCGCGGTGACGTACAACCAGAACGGCTATACCGACACGACGTCGATCGAGGCCGGCGCCCGCGCCCGGTTTCGT ACGGGGCCCGTCAGCCATCAGGTGTCGCTCGGCGTGACGTCGCTGCAGATCGAGGCCGGCACGATCAACCGGACGAGCGC GACGTTCGCGTCGAACATCTACGCGCCGATCGATCCGCCGCTCGCGCCGTCGCCGGGCCCGGCGCCGAAGACGTCGGAGT CCGCGCTGACGAGCGTCGCGCTGGCCGATACGCTGTCGCTCGCACGCGATCGCGTGCAGCTCACGGTCGGGTTGCGCAGC CAGCGCGTCCATGCGAAGACCTATGCGGCCGCGACGGGACTGAAGACCGCGGACTACAACGAAACCGCGCTGACGCCGGC GTTCGCGCTCGTCGTCAGACCGTTCGGGCCGGACGTGTCGCTGTATGCGAACTATGTCGAAGGGCTGACCCAGGGCGACA CCGTGTCTGATGTCACGGCGAAGAACTATGGCCAGATGTTTGCGCCGTACAAGAGCAAGCAGGTCGAGGTCGGCGCGAAA TGGGAGACCGACACCTTCGCGAACACGCTGTCGCTGTTCCAGATCACGAAGCCGAGCATGCTGAAGGACCCCGCGACCAA CCTGTACAGCGCCGATGGCGAGCAGCGCAACCGCGGCGTCGAATGGAACGTGTTCGGCCAGGTGGTGCCGCGGCTGCGCG TGCTGGGCGGCGTCGCGTACACGCAGGCGCTGCTGACGCACACGGCCGGCGGTGCCTATGACGGCAACACGGCGTACGGC GTGCCGAAATGGACGGCGAACCTCGGCCTCGAATGGGATGCGCCGTGGGTGCGCGGGCTGACGCTGTCCGGCCGCGCGGT GGCGACGAGCGCGCAGTTCGTCAACTCGACGAACACACAGCGCATTCCCGGCTGGACCCGCTTCGATCTCGGCGCGCGCT ACGCAACGCAGGTCGCCGGCAAGGCGGTCGTGCTGCGCGGCGCCGTCGAGAACGTCGCGAACCGCACGTTCTGGGCCGGC ACCTTCAACGACGGCTACGTCACGCAGAATGCGCCGCGCACCTTCAAGGTGTCGGCCACCATCGACTTCTGA
Upstream 100 bases:
>100_bases CATCAGTAAAAAAATTCACGGGACGATTGAGGGTTTCGGCGGTTCGTTCGGAATACACGATGCACCTTCGCAATATTCCG AACCCAAAGGATTCTTCATC
Downstream 100 bases:
>100_bases GGCGCACGATGATGACTCTCCGGAACTGGGCGATGCGCATGGCGTGTACGTGGCGTGTCGGTGTGGCGCTGGCGGCGATC GGCATGTCGACCGCGCACGC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: OM2 [H]
Number of amino acids: Translated: 823; Mature: 822
Protein sequence:
>823_residues MAFRRFSPSAASRPANRPVRRRAASRAFEPALAAALALAMPIGAQAQPDDPPSRVDTDERRAYAIPAGALDVVLNRYAVA AGVELASDAALTQHLASDGLNARVGVAEGFARLLAPHGLEAVRTGGGYLVRRRASAVPAAAGAGATLPTIVVNARAGALP EAYTGGQVARGGRLGMLGNADFMDAPFNITSYTSALIENQQAGTVADVLENDPSVRFTTSTGHIVENYTIRGFNVIADDL AFNGMYGLAPYGHSPTEFIERIEVLKGPNALLNGISPSGGVGGAINLVPKRAGDTPLARLTTDYISDGQFGVHADLGRRF GDRNQVGIRVNGAYRDGRTTMDGQNKKREFASLAFDVKGERARFSLDAYTDTERFDNGSPWMASFASQVVSPPSPGTNLL RGAWGKLDNQAVVARGELDLTDRITAYAGIGGLSYRYAGFINGTRAGAIQPNGNYRAVTYNQNGYTDTTSIEAGARARFR TGPVSHQVSLGVTSLQIEAGTINRTSATFASNIYAPIDPPLAPSPGPAPKTSESALTSVALADTLSLARDRVQLTVGLRS QRVHAKTYAAATGLKTADYNETALTPAFALVVRPFGPDVSLYANYVEGLTQGDTVSDVTAKNYGQMFAPYKSKQVEVGAK WETDTFANTLSLFQITKPSMLKDPATNLYSADGEQRNRGVEWNVFGQVVPRLRVLGGVAYTQALLTHTAGGAYDGNTAYG VPKWTANLGLEWDAPWVRGLTLSGRAVATSAQFVNSTNTQRIPGWTRFDLGARYATQVAGKAVVLRGAVENVANRTFWAG TFNDGYVTQNAPRTFKVSATIDF
Sequences:
>Translated_823_residues MAFRRFSPSAASRPANRPVRRRAASRAFEPALAAALALAMPIGAQAQPDDPPSRVDTDERRAYAIPAGALDVVLNRYAVA AGVELASDAALTQHLASDGLNARVGVAEGFARLLAPHGLEAVRTGGGYLVRRRASAVPAAAGAGATLPTIVVNARAGALP EAYTGGQVARGGRLGMLGNADFMDAPFNITSYTSALIENQQAGTVADVLENDPSVRFTTSTGHIVENYTIRGFNVIADDL AFNGMYGLAPYGHSPTEFIERIEVLKGPNALLNGISPSGGVGGAINLVPKRAGDTPLARLTTDYISDGQFGVHADLGRRF GDRNQVGIRVNGAYRDGRTTMDGQNKKREFASLAFDVKGERARFSLDAYTDTERFDNGSPWMASFASQVVSPPSPGTNLL RGAWGKLDNQAVVARGELDLTDRITAYAGIGGLSYRYAGFINGTRAGAIQPNGNYRAVTYNQNGYTDTTSIEAGARARFR TGPVSHQVSLGVTSLQIEAGTINRTSATFASNIYAPIDPPLAPSPGPAPKTSESALTSVALADTLSLARDRVQLTVGLRS QRVHAKTYAAATGLKTADYNETALTPAFALVVRPFGPDVSLYANYVEGLTQGDTVSDVTAKNYGQMFAPYKSKQVEVGAK WETDTFANTLSLFQITKPSMLKDPATNLYSADGEQRNRGVEWNVFGQVVPRLRVLGGVAYTQALLTHTAGGAYDGNTAYG VPKWTANLGLEWDAPWVRGLTLSGRAVATSAQFVNSTNTQRIPGWTRFDLGARYATQVAGKAVVLRGAVENVANRTFWAG TFNDGYVTQNAPRTFKVSATIDF >Mature_822_residues AFRRFSPSAASRPANRPVRRRAASRAFEPALAAALALAMPIGAQAQPDDPPSRVDTDERRAYAIPAGALDVVLNRYAVAA GVELASDAALTQHLASDGLNARVGVAEGFARLLAPHGLEAVRTGGGYLVRRRASAVPAAAGAGATLPTIVVNARAGALPE AYTGGQVARGGRLGMLGNADFMDAPFNITSYTSALIENQQAGTVADVLENDPSVRFTTSTGHIVENYTIRGFNVIADDLA FNGMYGLAPYGHSPTEFIERIEVLKGPNALLNGISPSGGVGGAINLVPKRAGDTPLARLTTDYISDGQFGVHADLGRRFG DRNQVGIRVNGAYRDGRTTMDGQNKKREFASLAFDVKGERARFSLDAYTDTERFDNGSPWMASFASQVVSPPSPGTNLLR GAWGKLDNQAVVARGELDLTDRITAYAGIGGLSYRYAGFINGTRAGAIQPNGNYRAVTYNQNGYTDTTSIEAGARARFRT GPVSHQVSLGVTSLQIEAGTINRTSATFASNIYAPIDPPLAPSPGPAPKTSESALTSVALADTLSLARDRVQLTVGLRSQ RVHAKTYAAATGLKTADYNETALTPAFALVVRPFGPDVSLYANYVEGLTQGDTVSDVTAKNYGQMFAPYKSKQVEVGAKW ETDTFANTLSLFQITKPSMLKDPATNLYSADGEQRNRGVEWNVFGQVVPRLRVLGGVAYTQALLTHTAGGAYDGNTAYGV PKWTANLGLEWDAPWVRGLTLSGRAVATSAQFVNSTNTQRIPGWTRFDLGARYATQVAGKAVVLRGAVENVANRTFWAGT FNDGYVTQNAPRTFKVSATIDF
Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=714, Percent_Identity=24.2296918767507, Blast_Score=94, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 87370; Mature: 87238
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRRFSPSAASRPANRPVRRRAASRAFEPALAAALALAMPIGAQAQPDDPPSRVDTDER CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC RAYAIPAGALDVVLNRYAVAAGVELASDAALTQHLASDGLNARVGVAEGFARLLAPHGLE EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCH AVRTGGGYLVRRRASAVPAAAGAGATLPTIVVNARAGALPEAYTGGQVARGGRLGMLGNA HEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCC DFMDAPFNITSYTSALIENQQAGTVADVLENDPSVRFTTSTGHIVENYTIRGFNVIADDL CCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEHHH AFNGMYGLAPYGHSPTEFIERIEVLKGPNALLNGISPSGGVGGAINLVPKRAGDTPLARL HHCCCEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHH TTDYISDGQFGVHADLGRRFGDRNQVGIRVNGAYRDGRTTMDGQNKKREFASLAFDVKGE HHHHHCCCCCEEEHHHHHHCCCCCCEEEEEECEEECCCCCCCCCHHHHHHHHEEEECCCC RARFSLDAYTDTERFDNGSPWMASFASQVVSPPSPGTNLLRGAWGKLDNQAVVARGELDL CEEEEEECCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCCH TDRITAYAGIGGLSYRYAGFINGTRAGAIQPNGNYRAVTYNQNGYTDTTSIEAGARARFR HHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEE TGPVSHQVSLGVTSLQIEAGTINRTSATFASNIYAPIDPPLAPSPGPAPKTSESALTSVA CCCCCEEEEECEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LADTLSLARDRVQLTVGLRSQRVHAKTYAAATGLKTADYNETALTPAFALVVRPFGPDVS HHHHHHHHHCEEEEEEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHH LYANYVEGLTQGDTVSDVTAKNYGQMFAPYKSKQVEVGAKWETDTFANTLSLFQITKPSM HHHHHHHCCCCCCCCHHHHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHHEEECCCCH LKDPATNLYSADGEQRNRGVEWNVFGQVVPRLRVLGGVAYTQALLTHTAGGAYDGNTAYG HCCCCCHHCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VPKWTANLGLEWDAPWVRGLTLSGRAVATSAQFVNSTNTQRIPGWTRFDLGARYATQVAG CCCHHHCCCCEECCCHHCCEEECCCEEECHHHHHCCCCCCCCCCCEEECCCHHHHHHHCC KAVVLRGAVENVANRTFWAGTFNDGYVTQNAPRTFKVSATIDF CEEEEEHHHHHHCCCEEEEECCCCCEEECCCCCEEEEEEEECC >Mature Secondary Structure AFRRFSPSAASRPANRPVRRRAASRAFEPALAAALALAMPIGAQAQPDDPPSRVDTDER CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC RAYAIPAGALDVVLNRYAVAAGVELASDAALTQHLASDGLNARVGVAEGFARLLAPHGLE EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCH AVRTGGGYLVRRRASAVPAAAGAGATLPTIVVNARAGALPEAYTGGQVARGGRLGMLGNA HEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCC DFMDAPFNITSYTSALIENQQAGTVADVLENDPSVRFTTSTGHIVENYTIRGFNVIADDL CCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEHHH AFNGMYGLAPYGHSPTEFIERIEVLKGPNALLNGISPSGGVGGAINLVPKRAGDTPLARL HHCCCEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHH TTDYISDGQFGVHADLGRRFGDRNQVGIRVNGAYRDGRTTMDGQNKKREFASLAFDVKGE HHHHHCCCCCEEEHHHHHHCCCCCCEEEEEECEEECCCCCCCCCHHHHHHHHEEEECCCC RARFSLDAYTDTERFDNGSPWMASFASQVVSPPSPGTNLLRGAWGKLDNQAVVARGELDL CEEEEEECCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCCH TDRITAYAGIGGLSYRYAGFINGTRAGAIQPNGNYRAVTYNQNGYTDTTSIEAGARARFR HHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEE TGPVSHQVSLGVTSLQIEAGTINRTSATFASNIYAPIDPPLAPSPGPAPKTSESALTSVA CCCCCEEEEECEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LADTLSLARDRVQLTVGLRSQRVHAKTYAAATGLKTADYNETALTPAFALVVRPFGPDVS HHHHHHHHHCEEEEEEECCCCEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHH LYANYVEGLTQGDTVSDVTAKNYGQMFAPYKSKQVEVGAKWETDTFANTLSLFQITKPSM HHHHHHHCCCCCCCCHHHHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHHEEECCCCH LKDPATNLYSADGEQRNRGVEWNVFGQVVPRLRVLGGVAYTQALLTHTAGGAYDGNTAYG HCCCCCHHCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VPKWTANLGLEWDAPWVRGLTLSGRAVATSAQFVNSTNTQRIPGWTRFDLGARYATQVAG CCCHHHCCCCEECCCHHCCEEECCCEEECHHHHHCCCCCCCCCCCEEECCCHHHHHHHCC KAVVLRGAVENVANRTFWAGTFNDGYVTQNAPRTFKVSATIDF CEEEEEHHHHHHCCCEEEEECCCCCEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 2311935 [H]