| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is fecR [H]
Identifier: 78066921
GI number: 78066921
Start: 2529444
End: 2530409
Strand: Reverse
Name: fecR [H]
Synonym: Bcep18194_A5452
Alternate gene names: 78066921
Gene position: 2530409-2529444 (Counterclockwise)
Preceding gene: 78066922
Following gene: 78066920
Centisome position: 68.5
GC content: 72.88
Gene sequence:
>966_bases GTGAGCGGGCGGCAGGGCGATGCATTGCCCGAGGCCGTCGTCGAGCAGGCGATCGGCTGGCTTGCCCGTCTGTGGTCGGG CGACGCGACCGACGACAATCGGCGCCGCTGCGCGGCCTGGCGTGCCGAGCATCCCGAACATGAGCGCGCATGGCAGCGGC TTGCCGGCATCGACGCGAAACTCGGCAGCGTGCCGGCCGATACGGCGCGCGGTGTCCTGCTTGCCCAGCCGGCCCGGCCC GCACGCCGGCGCGCGATGCGCGCGCTCGGCTGGGCGATCACGCTCGGCGGCGCGAGCTACGGCGTGCGCAGTACGCGTCT GTGGCAATCGGCGACATCCGACTATGCGAGCGGGGTGGGCGAAGTGCGCGATGTCACGCTCGCGGACGGCACGCGCGTAT GGCTCGACACGGAGAGTGCGATCGACGTGCGTTTCGACGCGCGCGAGCGACGCATCGTGCTCGTGCGTGGCGCGGTTCAT GTCGAGACCGCGCACGACACGGCGGGGCGGCCGCTGCGCGTCGAGATGCGGCAGGGGATGGCGCGTGCGCTCGGCACGCG CTTCACGGCCTCGGACGAGGGGATGCGCGCACGCGTCGACGTGTTCGACGGCGCGGTCGAGATCCGGCCGGCCCGCGCAG CCGATCGCTTGCTGCGGCTCGAGGCCGGCGAAGCCGTGCGGTTCGATGCGGACGGCTTCGCGCCGCGTGAGCCGGCAGAT GTCCGTGCGAGCGCATGGACGCAGGGCCGGCTGATCGCCGAACGCATGCGCGTCGATGCATGGTGCGCCGAGCTCGCACG CTACCGGCCGGGCGTCCTGCGCTGCGATCCGGCGCTTGCGCGGCTGTCGGTGTCGGGCGTGTTCTCGCTGACCGACACCG ATCGCGCACTCGCCAGCCTGCGTACCGCGTTGCCGGTCGACGTCGTCTACCGCACGCGCTACTGGGTCACGGTCGTCCCG CGCTGA
Upstream 100 bases:
>100_bases GCGAGATCGCCGCGCAGCTCGGCGTGTCGGTGTCGTCGGTCGAGAAGTACGTCGCGTCCGCGCTGCGCGCGTGCTATGCG GCGCTCTACGGGAGCGCATC
Downstream 100 bases:
>100_bases ACGTCGGCGCAGGGTCATCAGTAAAAAAATTCACGGGACGATTGAGGGTTTCGGCGGTTCGTTCGGAATACACGATGCAC CTTCGCAATATTCCGAACCC
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSGRQGDALPEAVVEQAIGWLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAKLGSVPADTARGVLLAQPARP ARRRAMRALGWAITLGGASYGVRSTRLWQSATSDYASGVGEVRDVTLADGTRVWLDTESAIDVRFDARERRIVLVRGAVH VETAHDTAGRPLRVEMRQGMARALGTRFTASDEGMRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPAD VRASAWTQGRLIAERMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASLRTALPVDVVYRTRYWVTVVP R
Sequences:
>Translated_321_residues MSGRQGDALPEAVVEQAIGWLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAKLGSVPADTARGVLLAQPARP ARRRAMRALGWAITLGGASYGVRSTRLWQSATSDYASGVGEVRDVTLADGTRVWLDTESAIDVRFDARERRIVLVRGAVH VETAHDTAGRPLRVEMRQGMARALGTRFTASDEGMRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPAD VRASAWTQGRLIAERMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASLRTALPVDVVYRTRYWVTVVP R >Mature_320_residues SGRQGDALPEAVVEQAIGWLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAKLGSVPADTARGVLLAQPARPA RRRAMRALGWAITLGGASYGVRSTRLWQSATSDYASGVGEVRDVTLADGTRVWLDTESAIDVRFDARERRIVLVRGAVHV ETAHDTAGRPLRVEMRQGMARALGTRFTASDEGMRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPADV RASAWTQGRLIAERMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASLRTALPVDVVYRTRYWVTVVPR
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=309, Percent_Identity=35.5987055016181, Blast_Score=168, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35422; Mature: 35290
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRQGDALPEAVVEQAIGWLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAK CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCC LGSVPADTARGVLLAQPARPARRRAMRALGWAITLGGASYGVRSTRLWQSATSDYASGVG CCCCCCHHHCCEEEECCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC EVRDVTLADGTRVWLDTESAIDVRFDARERRIVLVRGAVHVETAHDTAGRPLRVEMRQGM HHEEEEEECCCEEEEECCCCEEEEECCCCCEEEEEECEEEEEECCCCCCCCEEHHHHHHH ARALGTRFTASDEGMRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPAD HHHHCCCCCCCCCCCEEEEEEECCEEEEECHHHHHHHHEECCCCEEEECCCCCCCCCCCC VRASAWTQGRLIAERMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASL CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHEEECEEEEECCHHHHHHHH RTALPVDVVYRTRYWVTVVPR HHHCCCEEEEEEEEEEEEECC >Mature Secondary Structure SGRQGDALPEAVVEQAIGWLARLWSGDATDDNRRRCAAWRAEHPEHERAWQRLAGIDAK CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCC LGSVPADTARGVLLAQPARPARRRAMRALGWAITLGGASYGVRSTRLWQSATSDYASGVG CCCCCCHHHCCEEEECCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC EVRDVTLADGTRVWLDTESAIDVRFDARERRIVLVRGAVHVETAHDTAGRPLRVEMRQGM HHEEEEEECCCEEEEECCCCEEEEECCCCCEEEEEECEEEEEECCCCCCCCEEHHHHHHH ARALGTRFTASDEGMRARVDVFDGAVEIRPARAADRLLRLEAGEAVRFDADGFAPREPAD HHHHCCCCCCCCCCCEEEEEEECCEEEEECHHHHHHHHEECCCCEEEECCCCCCCCCCCC VRASAWTQGRLIAERMRVDAWCAELARYRPGVLRCDPALARLSVSGVFSLTDTDRALASL CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHEEECEEEEECCHHHHHHHH RTALPVDVVYRTRYWVTVVPR HHHCCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]