| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78066772
Identifier: 78066772
GI number: 78066772
Start: 2355608
End: 2356372
Strand: Reverse
Name: 78066772
Synonym: Bcep18194_A5303
Alternate gene names: NA
Gene position: 2356372-2355608 (Counterclockwise)
Preceding gene: 78066776
Following gene: 78066771
Centisome position: 63.79
GC content: 67.19
Gene sequence:
>765_bases ATGACGACCCATCTCACCGGAACGCGCGACGAATGGCTGGCCGCGCGCCATGCACTGCTCGACGCGGAAAAGGCGCTGAC GCGGCAAAGCGACGAACTCGCGCGGCGACGCCAGGCGCTGCCCTGGGTGCGCGTCGACAAGACATACCGGTTCGACACCG AACAAGGGCAGGCAACGCTCGACGACCTGTTTCTCGACCGTTCGCAACTGCTCGTCTATCACTTCATGTTCGGCCCCGAT TACAAGGCCGGCTGCCCGTCGTGTTCGTCGATCGCCGACGGTTTCGACGGCTTCGCCGTGCACCTGGCGAACCACGACGT GACGCTCGCCGCCGTGTCGCGTGCGCCGCTCACGAAGCTGCTCGCTTACCGGCAGCGGATGGGGTGGCACTTCCCGTGGG CGTCGTCGGTCGGCAGCGATTTCAACTTCGACTTCAATGTGTCGTTCACCGAGACGCAGCAGCGCGCTGGCGATGTCGAG TACAACTACGCACGGGCCGGGCACGCGATGGACATGGATCCGCCGCCGGCGCCCGTCGTGGCGTTCGCGGCGACGTGCGG GACCGACGCGGTCACGTATTCGCTCGACCGGCCGGGGATGAGTGCGTTCGTGCGCGAGGACGGCGCGGTTTATCACACGT ACTCGACCTATGCGCGCGGCCTCGACGGGCTGTGGGGGATGTACCAGTGGCTCGATCGCGCGCCGCTCGGGCGCAACGAG ACCGGCCCGTGGTGGCGCCGTCATGACGAGTACGCACGCGGCTGA
Upstream 100 bases:
>100_bases ACTTGTCACTCCCTTCGGTCCGATACCCGCCGCTAATCTAGCACCACGCACACGGCACCGGACGCCGTGCCCGGATACCC ATCGGAAGGAGGAACCCGCC
Downstream 100 bases:
>100_bases GCGCACCGGCGACGGGCGGGGGCGGGCGATGACACGGCCGGCGACCGATGCTCCGGGGCCCGATCCGCGGGCCTTTGCGG TAGCGCTCACGGCCGTGTTC
Product: protein of unknown function DUF899, thioredoxin-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTTHLTGTRDEWLAARHALLDAEKALTRQSDELARRRQALPWVRVDKTYRFDTEQGQATLDDLFLDRSQLLVYHFMFGPD YKAGCPSCSSIADGFDGFAVHLANHDVTLAAVSRAPLTKLLAYRQRMGWHFPWASSVGSDFNFDFNVSFTETQQRAGDVE YNYARAGHAMDMDPPPAPVVAFAATCGTDAVTYSLDRPGMSAFVREDGAVYHTYSTYARGLDGLWGMYQWLDRAPLGRNE TGPWWRRHDEYARG
Sequences:
>Translated_254_residues MTTHLTGTRDEWLAARHALLDAEKALTRQSDELARRRQALPWVRVDKTYRFDTEQGQATLDDLFLDRSQLLVYHFMFGPD YKAGCPSCSSIADGFDGFAVHLANHDVTLAAVSRAPLTKLLAYRQRMGWHFPWASSVGSDFNFDFNVSFTETQQRAGDVE YNYARAGHAMDMDPPPAPVVAFAATCGTDAVTYSLDRPGMSAFVREDGAVYHTYSTYARGLDGLWGMYQWLDRAPLGRNE TGPWWRRHDEYARG >Mature_253_residues TTHLTGTRDEWLAARHALLDAEKALTRQSDELARRRQALPWVRVDKTYRFDTEQGQATLDDLFLDRSQLLVYHFMFGPDY KAGCPSCSSIADGFDGFAVHLANHDVTLAAVSRAPLTKLLAYRQRMGWHFPWASSVGSDFNFDFNVSFTETQQRAGDVEY NYARAGHAMDMDPPPAPVVAFAATCGTDAVTYSLDRPGMSAFVREDGAVYHTYSTYARGLDGLWGMYQWLDRAPLGRNET GPWWRRHDEYARG
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28718; Mature: 28587
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHLTGTRDEWLAARHALLDAEKALTRQSDELARRRQALPWVRVDKTYRFDTEQGQATL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCEEEECCCCCCHHH DDLFLDRSQLLVYHFMFGPDYKAGCPSCSSIADGFDGFAVHLANHDVTLAAVSRAPLTKL HHHHHCHHHHEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHH LAYRQRMGWHFPWASSVGSDFNFDFNVSFTETQQRAGDVEYNYARAGHAMDMDPPPAPVV HHHHHHCCCCCCCHHHCCCCCCEEEEEEEHHHHHHCCCCCEEHHHCCCCCCCCCCCCCCE AFAATCGTDAVTYSLDRPGMSAFVREDGAVYHTYSTYARGLDGLWGMYQWLDRAPLGRNE EEEHHCCCCCEEEECCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCC TGPWWRRHDEYARG CCCHHHHCHHHCCC >Mature Secondary Structure TTHLTGTRDEWLAARHALLDAEKALTRQSDELARRRQALPWVRVDKTYRFDTEQGQATL CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCEEEECCCCCCHHH DDLFLDRSQLLVYHFMFGPDYKAGCPSCSSIADGFDGFAVHLANHDVTLAAVSRAPLTKL HHHHHCHHHHEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHH LAYRQRMGWHFPWASSVGSDFNFDFNVSFTETQQRAGDVEYNYARAGHAMDMDPPPAPVV HHHHHHCCCCCCCHHHCCCCCCEEEEEEEHHHHHHCCCCCEEHHHCCCCCCCCCCCCCCE AFAATCGTDAVTYSLDRPGMSAFVREDGAVYHTYSTYARGLDGLWGMYQWLDRAPLGRNE EEEHHCCCCCEEEECCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCC TGPWWRRHDEYARG CCCHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA