| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066771
Identifier: 78066771
GI number: 78066771
Start: 2354773
End: 2355579
Strand: Reverse
Name: 78066771
Synonym: Bcep18194_A5302
Alternate gene names: NA
Gene position: 2355579-2354773 (Counterclockwise)
Preceding gene: 78066772
Following gene: 78066770
Centisome position: 63.77
GC content: 74.85
Gene sequence:
>807_bases ATGACACGGCCGGCGACCGATGCTCCGGGGCCCGATCCGCGGGCCTTTGCGGTAGCGCTCACGGCCGTGTTCGCCGCCGC CGCGATCGCGACCGTGGCGCAGCACGCGTCGATGGTCGCGATGGGCGGCGCGCCCGTCTCCGGCGGCTGGATGACGTCGG CCGCCTGGCAGCGGCCGTGCGGATGGGGCGTAGGACGCACGTTCGCGGCATTCGCGGGCATGTGGGGCGCGATGACGGTG ACGATGATGCTGCCGGTGCTGGCGCCGGTACTCTGGCGATACCGGCAGCGCGTCGGTCAGCAGGCCGCGCTGCGTTCGGC CGGGCTCGTCGTCGTCGCGGGTGCCGGGTATTTCGCGGTGTGGATGGCGGTTGGCGCGCTCGTGTTTCCGGCCGGCGCCG CCCTGACGAGCGCCGCCGCACGGCTGCCGGCGCTCGCCCGTGCGATGCCGTTCGCAGCTGGCGCGGTCGTATTGGCGGCA GGCGCCCTGCAATTCTCCGCATGGAAGGCGCGGCGGCTGGCGTGCTGCCGGCACGCCGCGACCTGTGTGGTCCCGCCGCG CGCGGGGGCCGACGCAGCATGGCGGCACGGCGTGCGGGCCGCCATGCATTGCAGTGCCTGTTGCGGAAACCTGATGGCGA TCGCGCTCGCGGCCGGCATGATGGACCTGCGCGTGATGGCCGCCGTGACGGCCGCGATTGCCGCGGAGCGCCTCGCGCCG TCCGGCGGGCGGGTTGCGCGGATCGCCGGCTGCGTGGCGGCCGGCGCAGGCATCGCGATGATCGCGCGCGCGGCCGGGCT GCTATAA
Upstream 100 bases:
>100_bases GATCGCGCGCCGCTCGGGCGCAACGAGACCGGCCCGTGGTGGCGCCGTCATGACGAGTACGCACGCGGCTGAGCGCACCG GCGACGGGCGGGGGCGGGCG
Downstream 100 bases:
>100_bases CAGAGGGTAGGCAGGCCGATTCGACACGTTGCCGGGCCCTGCTTCTTCGTGGCCATTACCGTCGCGTGACCTGTTCGCAA CAGACGGATCGACCGCCTGG
Product: metal-binding integral membrane protein-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTRPATDAPGPDPRAFAVALTAVFAAAAIATVAQHASMVAMGGAPVSGGWMTSAAWQRPCGWGVGRTFAAFAGMWGAMTV TMMLPVLAPVLWRYRQRVGQQAALRSAGLVVVAGAGYFAVWMAVGALVFPAGAALTSAAARLPALARAMPFAAGAVVLAA GALQFSAWKARRLACCRHAATCVVPPRAGADAAWRHGVRAAMHCSACCGNLMAIALAAGMMDLRVMAAVTAAIAAERLAP SGGRVARIAGCVAAGAGIAMIARAAGLL
Sequences:
>Translated_268_residues MTRPATDAPGPDPRAFAVALTAVFAAAAIATVAQHASMVAMGGAPVSGGWMTSAAWQRPCGWGVGRTFAAFAGMWGAMTV TMMLPVLAPVLWRYRQRVGQQAALRSAGLVVVAGAGYFAVWMAVGALVFPAGAALTSAAARLPALARAMPFAAGAVVLAA GALQFSAWKARRLACCRHAATCVVPPRAGADAAWRHGVRAAMHCSACCGNLMAIALAAGMMDLRVMAAVTAAIAAERLAP SGGRVARIAGCVAAGAGIAMIARAAGLL >Mature_267_residues TRPATDAPGPDPRAFAVALTAVFAAAAIATVAQHASMVAMGGAPVSGGWMTSAAWQRPCGWGVGRTFAAFAGMWGAMTVT MMLPVLAPVLWRYRQRVGQQAALRSAGLVVVAGAGYFAVWMAVGALVFPAGAALTSAAARLPALARAMPFAAGAVVLAAG ALQFSAWKARRLACCRHAATCVVPPRAGADAAWRHGVRAAMHCSACCGNLMAIALAAGMMDLRVMAAVTAAIAAERLAPS GGRVARIAGCVAAGAGIAMIARAAGLL
Specific function: Unknown
COG id: COG5486
COG function: function code S; Predicted metal-binding integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26911; Mature: 26780
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPATDAPGPDPRAFAVALTAVFAAAAIATVAQHASMVAMGGAPVSGGWMTSAAWQRPC CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCCC GWGVGRTFAAFAGMWGAMTVTMMLPVLAPVLWRYRQRVGQQAALRSAGLVVVAGAGYFAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH WMAVGALVFPAGAALTSAAARLPALARAMPFAAGAVVLAAGALQFSAWKARRLACCRHAA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TCVVPPRAGADAAWRHGVRAAMHCSACCGNLMAIALAAGMMDLRVMAAVTAAIAAERLAP EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGGRVARIAGCVAAGAGIAMIARAAGLL CCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRPATDAPGPDPRAFAVALTAVFAAAAIATVAQHASMVAMGGAPVSGGWMTSAAWQRPC CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCCC GWGVGRTFAAFAGMWGAMTVTMMLPVLAPVLWRYRQRVGQQAALRSAGLVVVAGAGYFAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH WMAVGALVFPAGAALTSAAARLPALARAMPFAAGAVVLAAGALQFSAWKARRLACCRHAA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TCVVPPRAGADAAWRHGVRAAMHCSACCGNLMAIALAAGMMDLRVMAAVTAAIAAERLAP EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGGRVARIAGCVAAGAGIAMIARAAGLL CCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA