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The map label for this gene is rnfH [H]

Identifier: 78066776

GI number: 78066776

Start: 2359594

End: 2359917

Strand: Reverse

Name: rnfH [H]

Synonym: Bcep18194_A5307

Alternate gene names: 78066776

Gene position: 2359917-2359594 (Counterclockwise)

Preceding gene: 78066777

Following gene: 78066772

Centisome position: 63.88

GC content: 67.9

Gene sequence:

>324_bases
ATGCTGTCGATCGAAGTCTGCTACGCGCTGCCGGACCGCCAGACGCTGATTCCGCTGTCGCTGCCCGACGGGGCGACCGT
TCGTTCGGCGATCGATGCGAGCGGCGTACTCGCGCTGCACCCGGAAATCGATCTCGCGAACGCGAAGACGGGCGTGTACG
GCAAGCTTGCGCCGCTCGACGCACCGCTCGCCGACCACGACCGCGTCGAGATCTACCGCCCGTTGATCGTCGATCCGAAG
CTCGCGCGCCAGCGTCGCGTCGACAAGTCGCGCCGCGACGGCTCCATCGAGGGCCGCAAGTGGATGCACAAGGACGCGCG
CTGA

Upstream 100 bases:

>100_bases
CTTGAGAAGATCATCGGGCCCGTGTTCAGCCATATCGCGAACACGTTCGTCGATTCGTTCGTGAAGCGCGCCGACCAGCG
CTACGGGAAGGGGTGACGCG

Downstream 100 bases:

>100_bases
CGCGGGCCGATCCGCGTCTTTCGCCCCGATTCGTCTGATCAAACGCCGCGGCGCTCAGTGGGCCGCGGCGTTCGCGTTTG
CCGGCGCGCTTCCCGGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MLSIEVCYALPDRQTLIPLSLPDGATVRSAIDASGVLALHPEIDLANAKTGVYGKLAPLDAPLADHDRVEIYRPLIVDPK
LARQRRVDKSRRDGSIEGRKWMHKDAR

Sequences:

>Translated_107_residues
MLSIEVCYALPDRQTLIPLSLPDGATVRSAIDASGVLALHPEIDLANAKTGVYGKLAPLDAPLADHDRVEIYRPLIVDPK
LARQRRVDKSRRDGSIEGRKWMHKDAR
>Mature_107_residues
MLSIEVCYALPDRQTLIPLSLPDGATVRSAIDASGVLALHPEIDLANAKTGVYGKLAPLDAPLADHDRVEIYRPLIVDPK
LARQRRVDKSRRDGSIEGRKWMHKDAR

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=89, Percent_Identity=51.685393258427, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 11866; Mature: 11866

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIEVCYALPDRQTLIPLSLPDGATVRSAIDASGVLALHPEIDLANAKTGVYGKLAPLD
CCEEEEEEECCCCCEEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCC
APLADHDRVEIYRPLIVDPKLARQRRVDKSRRDGSIEGRKWMHKDAR
CCCCCCCCEEEECCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSIEVCYALPDRQTLIPLSLPDGATVRSAIDASGVLALHPEIDLANAKTGVYGKLAPLD
CCEEEEEEECCCCCEEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCC
APLADHDRVEIYRPLIVDPKLARQRRVDKSRRDGSIEGRKWMHKDAR
CCCCCCCCEEEECCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA