| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is mrcA [H]
Identifier: 78066728
GI number: 78066728
Start: 2314205
End: 2316721
Strand: Reverse
Name: mrcA [H]
Synonym: Bcep18194_A5259
Alternate gene names: 78066728
Gene position: 2316721-2314205 (Counterclockwise)
Preceding gene: 78066733
Following gene: 78066723
Centisome position: 62.71
GC content: 66.67
Gene sequence:
>2517_bases ATGCCAATTATCAAACGACCGCCTTCTTCTTCCGACAGGAACGAACCCCACTACACGCTGCGCCGTTCACCGTCCGGAGC CTATTACCCCGATGACGACGATCGCGACGACGACCGCCGCACCCAGCGCAGCGGCGGCGGAGGGCGCGGTCGCTCGTTCG GCTCGCGCGTCATGCTGTGGTTCGCCGGCCTGTTCGTGACGCTGGCGATCGTCGGCGCGCTGATCGTCGGCTACGCGCTG GTCGTGATGGCGCCGCAGCTGCCGTCGCTCGATGCGCTGACCAACTACCAGCCGAAAGTACCGTTGCGCGTGTTCACGGC CGATCACGTGTTGATCGGCGAGTTCGGCGAAGAGCGCCGCAGCCTCGTGCGCTTCCAGGAAATCCCGGACGTGATGAAGA AGGCTGTGCTCGCGATCGAGGACTACCGCTTCTACGAACACGGCGGCGTCGACTTCGTCGGTATCCTGCGCGCGGGTGTC GCCGACCTGATGCACGGCGGCGCGCGCCAGGGCGCGAGCACGATCACGATGCAGGTCGCGCGCAACTTCTTCCTGTCGAG CGAGAAGACCTACACGCGCAAGATTTACGAAATGCTGCTCGCGTACAAGATCGAGAGGGCCCTGACGAAGGACCAGATCC TCGAGCTGTACATGAACCAGATCTATCTCGGCCAGCGTTCGTACGGCTTCGCGGCCGCCGCGCGCGTGTATTTCGGCAAG GACCTGAAGGACATCACGCTCGCGGAAGCGGCGATGCTCGCGGGGCTGCCGAAGGCGCCGTCCGCGTATAACCCGGTCGT CAATCCGAAGCGCGCGAAGGTGCGCCAGGAATACATCCTGAAGCGCATGCTCGAGGTCGGCTACATCACGCAGCCGCAGT ACGACGAAGCCGTGAAGGAAGAGATCCACGTGCGCACGCCGGGCAACCAGTACGCGGTGCACGGCGAGTACGTCGCCGAG ATGGTGCGGCAGATGATGTACCAGCAGTACAAGGATGAAACCTATACGCGCGGGCTGACCGTCACGACGACGATCAACTC GTCCGACCAGGAAGCCGCGTACCAGGCCGTGCGTCGCGGCATTCTCGACTACGAGCGCCGCCACGGCTATCGCGGGCCGG AAGCGACGATCAAGCTGCCCGCGGCCGGCGACGACCGCGACGAGGCGATCGACGACGCGCTCGCCGATCACCCGGACAAC GGCGACCTGCAGTCGGCAGTGGTGCTGTCGGCGTCGCCGAATGCGGTCGAGGTGCAGTTCGTCGGCGGCGCGACCACGAC GATCGGCCCGGCCGGGCTGCGCTTCGTGGCGGGCGCGCTCAGCCCCCGCGCGAACGACACGCTGCGCATCAAGCCGGGCT CGGTCGTGCGCGTGCTGAAGGACGGCAAGACGGGCTGGCAGGTCGTGCAACTGCCGCAGGTCGAAGGCGCGCTCGTCGCG ATGGCGCCGCAGGATGGCGCGATCCGCTCGCTCGTCGGCGGCTTCGACTTCAACAAGAGCAAGTTCAACCACGTGACGCA GGCATGGCGGCAGCCGGGCTCGTCGTTCAAGCCGTTCATCTACTCGGCATCGCTCGACAAGGGCATGGGGCCGGCGACGA TGATCAACGACGCGCCGCTGTACTTCCCGCCGAGCGTGCCGGGCGGCACCGCATGGGAGCCGAAGGACGACGACCAGCCG GATGGCCCGATGACGATGCGCACCGGCCTGCAGCGTTCGAAGAACCTCGTGTCGATCCGGATCCTCGCGTCGATCGGTAC GCAGTATGCGCAGCAGTACGTGACGCAGCGCTTCGGCTTCGATCCCGCGAAGACGCCGCCTTACCTGCCGATGGCACTCG GCGCGGGCCTCGTGACGCCGCTGCAGCTCGCGACCGGCTATGCGGTGTTCGCGAACGGCGGCTACAAGGTCGATCCGTAC CTGATCGCCGAGGTCGACGATGCACGCGGCCAGGCGCTGCAGAAGTCGCAGCCGGTGCTCGCGGGCAGCACGGCACCGCG CACGATCGAAGGCCGCAACGCGTACGTGATGAACAGCCTGCTGCATTCGGTCGCGACGGCCGGCACCGGCGCGGGCACCA ATGCACTGGGCCGCAGCGACCTGCAGGGCAAGACGGGTACGACCAACGACGCGAAGGACGGCTGGTTCGCCGGCTACCAG CAGTCGCTCGTCGCGGTCGCGTGGATGGGCTTCGACCAGCCGAAGAGCCTCGGCAGCCGCGAATTCGGCGCACAGCTCGC GTTGCCGATCTGGGTGAACTACATGCGCACCGCGCTGAACGGCGTACCCGAACAGCAGATGCCGATGCCGGACGGCCTGA CTTCGATCGACGGCGAGCTGTACTACGCCGATCGCACGCCGGGCAATGGCTTCGTCGCGAACGTCGACATCAACCCGGCC GAGAATTCGATCAGCGCGAACGACGCACTCGGTTCGGCCGGCGCGGCGGGGCTGGCGCCGCCGCCCGTCACGCCGCAGGA GAAGCAGCAGATCATGGACATGTTCGAGAGCAAGTAA
Upstream 100 bases:
>100_bases TCTGTCGACGTGACAGCCGCATCACGCTGTATCCGCTCTGATTCATTCGCCTGCATTTCCGCATGCGTCCGAGGGCGCCA CGTACGCCCGCCATTCCGAC
Downstream 100 bases:
>100_bases GCGGCACGCCGCAGTTCCGGCATGCGACGGGCGCCTTCGGGCGCCCGTTTTTTTTGCGCGAATTGTCGGCGGAGAGAAGG GGAATCAGAACGACGCGCAG
Product: penicillin-binding protein 1A
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 838; Mature: 837
Protein sequence:
>838_residues MPIIKRPPSSSDRNEPHYTLRRSPSGAYYPDDDDRDDDRRTQRSGGGGRGRSFGSRVMLWFAGLFVTLAIVGALIVGYAL VVMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRSLVRFQEIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGV ADLMHGGARQGASTITMQVARNFFLSSEKTYTRKIYEMLLAYKIERALTKDQILELYMNQIYLGQRSYGFAAAARVYFGK DLKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEVGYITQPQYDEAVKEEIHVRTPGNQYAVHGEYVAE MVRQMMYQQYKDETYTRGLTVTTTINSSDQEAAYQAVRRGILDYERRHGYRGPEATIKLPAAGDDRDEAIDDALADHPDN GDLQSAVVLSASPNAVEVQFVGGATTTIGPAGLRFVAGALSPRANDTLRIKPGSVVRVLKDGKTGWQVVQLPQVEGALVA MAPQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGMGPATMINDAPLYFPPSVPGGTAWEPKDDDQP DGPMTMRTGLQRSKNLVSIRILASIGTQYAQQYVTQRFGFDPAKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPY LIAEVDDARGQALQKSQPVLAGSTAPRTIEGRNAYVMNSLLHSVATAGTGAGTNALGRSDLQGKTGTTNDAKDGWFAGYQ QSLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTSIDGELYYADRTPGNGFVANVDINPA ENSISANDALGSAGAAGLAPPPVTPQEKQQIMDMFESK
Sequences:
>Translated_838_residues MPIIKRPPSSSDRNEPHYTLRRSPSGAYYPDDDDRDDDRRTQRSGGGGRGRSFGSRVMLWFAGLFVTLAIVGALIVGYAL VVMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRSLVRFQEIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGV ADLMHGGARQGASTITMQVARNFFLSSEKTYTRKIYEMLLAYKIERALTKDQILELYMNQIYLGQRSYGFAAAARVYFGK DLKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEVGYITQPQYDEAVKEEIHVRTPGNQYAVHGEYVAE MVRQMMYQQYKDETYTRGLTVTTTINSSDQEAAYQAVRRGILDYERRHGYRGPEATIKLPAAGDDRDEAIDDALADHPDN GDLQSAVVLSASPNAVEVQFVGGATTTIGPAGLRFVAGALSPRANDTLRIKPGSVVRVLKDGKTGWQVVQLPQVEGALVA MAPQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGMGPATMINDAPLYFPPSVPGGTAWEPKDDDQP DGPMTMRTGLQRSKNLVSIRILASIGTQYAQQYVTQRFGFDPAKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPY LIAEVDDARGQALQKSQPVLAGSTAPRTIEGRNAYVMNSLLHSVATAGTGAGTNALGRSDLQGKTGTTNDAKDGWFAGYQ QSLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTSIDGELYYADRTPGNGFVANVDINPA ENSISANDALGSAGAAGLAPPPVTPQEKQQIMDMFESK >Mature_837_residues PIIKRPPSSSDRNEPHYTLRRSPSGAYYPDDDDRDDDRRTQRSGGGGRGRSFGSRVMLWFAGLFVTLAIVGALIVGYALV VMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERRSLVRFQEIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVA DLMHGGARQGASTITMQVARNFFLSSEKTYTRKIYEMLLAYKIERALTKDQILELYMNQIYLGQRSYGFAAAARVYFGKD LKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEVGYITQPQYDEAVKEEIHVRTPGNQYAVHGEYVAEM VRQMMYQQYKDETYTRGLTVTTTINSSDQEAAYQAVRRGILDYERRHGYRGPEATIKLPAAGDDRDEAIDDALADHPDNG DLQSAVVLSASPNAVEVQFVGGATTTIGPAGLRFVAGALSPRANDTLRIKPGSVVRVLKDGKTGWQVVQLPQVEGALVAM APQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGMGPATMINDAPLYFPPSVPGGTAWEPKDDDQPD GPMTMRTGLQRSKNLVSIRILASIGTQYAQQYVTQRFGFDPAKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYL IAEVDDARGQALQKSQPVLAGSTAPRTIEGRNAYVMNSLLHSVATAGTGAGTNALGRSDLQGKTGTTNDAKDGWFAGYQQ SLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTSIDGELYYADRTPGNGFVANVDINPAE NSISANDALGSAGAAGLAPPPVTPQEKQQIMDMFESK
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=818, Percent_Identity=39.7310513447433, Blast_Score=531, Evalue=1e-152, Organism=Escherichia coli, GI1786343, Length=265, Percent_Identity=35.4716981132075, Blast_Score=143, Evalue=4e-35, Organism=Escherichia coli, GI1788867, Length=229, Percent_Identity=31.8777292576419, Blast_Score=110, Evalue=4e-25, Organism=Escherichia coli, GI1789601, Length=176, Percent_Identity=34.0909090909091, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.- [C]
Molecular weight: Translated: 91311; Mature: 91179
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIIKRPPSSSDRNEPHYTLRRSPSGAYYPDDDDRDDDRRTQRSGGGGRGRSFGSRVMLW CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH FAGLFVTLAIVGALIVGYALVVMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCEEEECHHHHHHH SLVRFQEIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVADLMHGGARQGASTITMQVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH RNFFLSSEKTYTRKIYEMLLAYKIERALTKDQILELYMNQIYLGQRSYGFAAAARVYFGK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC DLKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEVGYITQPQYDEAVKE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH EIHVRTPGNQYAVHGEYVAEMVRQMMYQQYKDETYTRGLTVTTTINSSDQEAAYQAVRRG CEEEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCHHHHHHHHHHH ILDYERRHGYRGPEATIKLPAAGDDRDEAIDDALADHPDNGDLQSAVVLSASPNAVEVQF HHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEE VGGATTTIGPAGLRFVAGALSPRANDTLRIKPGSVVRVLKDGKTGWQVVQLPQVEGALVA ECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEE MAPQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGMGPATMINDAPL ECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEECCCCE YFPPSVPGGTAWEPKDDDQPDGPMTMRTGLQRSKNLVSIRILASIGTQYAQQYVTQRFGF EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCC DPAKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYLIAEVDDARGQALQKSQPVL CCCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCEEECCEEEEEECCHHCHHHHHCCCEE AGSTAPRTIEGRNAYVMNSLLHSVATAGTGAGTNALGRSDLQGKTGTTNDAKDGWFAGYQ ECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QSLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTSIDGEL HHHHHHHHCCCCCCHHCCCHHHCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE YYADRTPGNGFVANVDINPAENSISANDALGSAGAAGLAPPPVTPQEKQQIMDMFESK EEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PIIKRPPSSSDRNEPHYTLRRSPSGAYYPDDDDRDDDRRTQRSGGGGRGRSFGSRVMLW CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHH FAGLFVTLAIVGALIVGYALVVMAPQLPSLDALTNYQPKVPLRVFTADHVLIGEFGEERR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEECCEEEECHHHHHHH SLVRFQEIPDVMKKAVLAIEDYRFYEHGGVDFVGILRAGVADLMHGGARQGASTITMQVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH RNFFLSSEKTYTRKIYEMLLAYKIERALTKDQILELYMNQIYLGQRSYGFAAAARVYFGK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC DLKDITLAEAAMLAGLPKAPSAYNPVVNPKRAKVRQEYILKRMLEVGYITQPQYDEAVKE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH EIHVRTPGNQYAVHGEYVAEMVRQMMYQQYKDETYTRGLTVTTTINSSDQEAAYQAVRRG CEEEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCHHHHHHHHHHH ILDYERRHGYRGPEATIKLPAAGDDRDEAIDDALADHPDNGDLQSAVVLSASPNAVEVQF HHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEE VGGATTTIGPAGLRFVAGALSPRANDTLRIKPGSVVRVLKDGKTGWQVVQLPQVEGALVA ECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEE MAPQDGAIRSLVGGFDFNKSKFNHVTQAWRQPGSSFKPFIYSASLDKGMGPATMINDAPL ECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEECCCCE YFPPSVPGGTAWEPKDDDQPDGPMTMRTGLQRSKNLVSIRILASIGTQYAQQYVTQRFGF EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCC DPAKTPPYLPMALGAGLVTPLQLATGYAVFANGGYKVDPYLIAEVDDARGQALQKSQPVL CCCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCEEECCEEEEEECCHHCHHHHHCCCEE AGSTAPRTIEGRNAYVMNSLLHSVATAGTGAGTNALGRSDLQGKTGTTNDAKDGWFAGYQ ECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QSLVAVAWMGFDQPKSLGSREFGAQLALPIWVNYMRTALNGVPEQQMPMPDGLTSIDGEL HHHHHHHHCCCCCCHHCCCHHHCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE YYADRTPGNGFVANVDINPAENSISANDALGSAGAAGLAPPPVTPQEKQQIMDMFESK EEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA