| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yidB [H]
Identifier: 78066616
GI number: 78066616
Start: 2192700
End: 2193137
Strand: Direct
Name: yidB [H]
Synonym: Bcep18194_A5147
Alternate gene names: 78066616
Gene position: 2192700-2193137 (Clockwise)
Preceding gene: 78066615
Following gene: 78066619
Centisome position: 59.36
GC content: 68.49
Gene sequence:
>438_bases ATGGGTCTCCTCGACATCGTTGGCGGTCTGCTCGGCGGCCAGGCCGGCGGCAACTCGCAAAGCGCGCTGATCACGACCGC GCTCGAATTCATCAACAACCAGCCGGGCGGCCTGAACGGCCTGATCGAGAAGTTCAAGGCCGGCGGCGCCGGCGACGTCA TCGGTTCGTGGGTCGGCACCGGCCAGAACCAGCCGATTTCGCCGGACGCGCTGCAGAACGTGCTGGGCTCGGACGCGATC GGTGCGCTCGCGAGCAAGTTCGGTGTCGATCCGTCGATGGCCTCGACCGTGCTCGCGCAAGTGCTGCCGCACGTCGTCAA CCACGCGACGCCGGACGGCGCCGTGCCGGCCGATGGCCAGGCACAGGTCGACCCGTCGAACGTGCTCGGCTCGCTGTCGC AGATCGCCGGCATGTTCGGCGGCAACAAGCAGGGCTGA
Upstream 100 bases:
>100_bases TCGGGCGCCTGATGTGCGCCGCGCGCGCGACGGCGTGCGCGCGGCATTCGTTCAACGGGCGCCCACAGCGTGGCGCCCTT ATCGGTAAAGGTGAAGAACC
Downstream 100 bases:
>100_bases TTCGAACCCTGCATCGTTGCGACACCCCATAAGCAAACACCCCGCCTGAGCGGGGTGTTTGTTTTGGTGCGCCCGGTACG AGCCGGGCGGCAGGCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGLLDIVGGLLGGQAGGNSQSALITTALEFINNQPGGLNGLIEKFKAGGAGDVIGSWVGTGQNQPISPDALQNVLGSDAI GALASKFGVDPSMASTVLAQVLPHVVNHATPDGAVPADGQAQVDPSNVLGSLSQIAGMFGGNKQG
Sequences:
>Translated_145_residues MGLLDIVGGLLGGQAGGNSQSALITTALEFINNQPGGLNGLIEKFKAGGAGDVIGSWVGTGQNQPISPDALQNVLGSDAI GALASKFGVDPSMASTVLAQVLPHVVNHATPDGAVPADGQAQVDPSNVLGSLSQIAGMFGGNKQG >Mature_144_residues GLLDIVGGLLGGQAGGNSQSALITTALEFINNQPGGLNGLIEKFKAGGAGDVIGSWVGTGQNQPISPDALQNVLGSDAIG ALASKFGVDPSMASTVLAQVLPHVVNHATPDGAVPADGQAQVDPSNVLGSLSQIAGMFGGNKQG
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082321, Length=117, Percent_Identity=37.6068376068376, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009282 [H]
Pfam domain/function: PF06078 DUF937 [H]
EC number: NA
Molecular weight: Translated: 14242; Mature: 14111
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLDIVGGLLGGQAGGNSQSALITTALEFINNQPGGLNGLIEKFKAGGAGDVIGSWVGT CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHCC GQNQPISPDALQNVLGSDAIGALASKFGVDPSMASTVLAQVLPHVVNHATPDGAVPADGQ CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AQVDPSNVLGSLSQIAGMFGGNKQG CCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GLLDIVGGLLGGQAGGNSQSALITTALEFINNQPGGLNGLIEKFKAGGAGDVIGSWVGT CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHCC GQNQPISPDALQNVLGSDAIGALASKFGVDPSMASTVLAQVLPHVVNHATPDGAVPADGQ CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AQVDPSNVLGSLSQIAGMFGGNKQG CCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3029692; 7686882; 9278503 [H]