| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066615
Identifier: 78066615
GI number: 78066615
Start: 2191988
End: 2192611
Strand: Direct
Name: 78066615
Synonym: Bcep18194_A5146
Alternate gene names: NA
Gene position: 2191988-2192611 (Clockwise)
Preceding gene: 78066612
Following gene: 78066616
Centisome position: 59.34
GC content: 68.43
Gene sequence:
>624_bases ATGCTGAAAAAGCTGCTGATGCTGTTCGTCGCGCTATCGCTGTCGCTCGCCGCGGGCCTTGCCGCAGCCGTCGAAGTCAA CACGGCTGACCAGGCCACGCTCGAATCGGTGAAGGGTCTCGGGCCCGTGAAGTCGAAGGCGATCATCGACGAACGCACCA AGAACGGCCCGTTCAAGGACGCGGACGATCTCGCGAACCGCGTGAAGGGCCTCGGCACGAAGTCGGTCGGGCATCTCGAG GAAAACGGCCTGACGATCGGCGGCTCGGCGACGCCGCCGAAGGGCGTGAAGCTGTCGAAGCCGGCCGCGACGACATCGGC AACGACGTCGGCCACCACGTCCGCAACGACGTCGGCAGGCACGGCGTCGACGTCCACGACCGCGACGGCCGGCACGACGG CCACGGCACCGGCACCGGCGGCAAGCGCGCCGGATGCGGCGACGAAGCCGGCCAAGGCCAAGCGCATGACGAAGAAGGAA AAGGCGGCCGCAGCAGCGGCGGCATCCGCCGATGCGGGTGCGAGCGCACCGGCCGCCGCATCGTCGGCAAAAGCGACGAA GGGTTCGAAGAAGAAAAGCAAGAAGGACAAGGCAGCCTCCGCCGCCGCGGCGTCGGGCGCCTGA
Upstream 100 bases:
>100_bases GCACGCATTTGTCCTATGCTTAACGGCGACGCCCGGCCACGCCTCGCCCCGCCGTCCGTTGCAACAGCCATTCATCCGTC AGAACCAGGGAGCCTTTGCC
Downstream 100 bases:
>100_bases TGTGCGCCGCGCGCGCGACGGCGTGCGCGCGGCATTCGTTCAACGGGCGCCCACAGCGTGGCGCCCTTATCGGTAAAGGT GAAGAACCATGGGTCTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Uptake Protein; ComEA-Related Signal Peptide Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; Helix-Turn-Helix Protein; Helix-Hairpin-Helix Motif; ComE Protein; DNA Uptake Protein ComEA-Like; Helix-Hairpin-Helix Motif Protein
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLKKLLMLFVALSLSLAAGLAAAVEVNTADQATLESVKGLGPVKSKAIIDERTKNGPFKDADDLANRVKGLGTKSVGHLE ENGLTIGGSATPPKGVKLSKPAATTSATTSATTSATTSAGTASTSTTATAGTTATAPAPAASAPDAATKPAKAKRMTKKE KAAAAAAASADAGASAPAAASSAKATKGSKKKSKKDKAASAAAASGA
Sequences:
>Translated_207_residues MLKKLLMLFVALSLSLAAGLAAAVEVNTADQATLESVKGLGPVKSKAIIDERTKNGPFKDADDLANRVKGLGTKSVGHLE ENGLTIGGSATPPKGVKLSKPAATTSATTSATTSATTSAGTASTSTTATAGTTATAPAPAASAPDAATKPAKAKRMTKKE KAAAAAAASADAGASAPAAASSAKATKGSKKKSKKDKAASAAAASGA >Mature_207_residues MLKKLLMLFVALSLSLAAGLAAAVEVNTADQATLESVKGLGPVKSKAIIDERTKNGPFKDADDLANRVKGLGTKSVGHLE ENGLTIGGSATPPKGVKLSKPAATTSATTSATTSATTSAGTASTSTTATAGTTATAPAPAASAPDAATKPAKAKRMTKKE KAAAAAAASADAGASAPAAASSAKATKGSKKKSKKDKAASAAAASGA
Specific function: Unknown
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19920; Mature: 19920
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKLLMLFVALSLSLAAGLAAAVEVNTADQATLESVKGLGPVKSKAIIDERTKNGPFKD CHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC ADDLANRVKGLGTKSVGHLEENGLTIGGSATPPKGVKLSKPAATTSATTSATTSATTSAG HHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC TASTSTTATAGTTATAPAPAASAPDAATKPAKAKRMTKKEKAAAAAAASADAGASAPAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SSAKATKGSKKKSKKDKAASAAAASGA CHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKKLLMLFVALSLSLAAGLAAAVEVNTADQATLESVKGLGPVKSKAIIDERTKNGPFKD CHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC ADDLANRVKGLGTKSVGHLEENGLTIGGSATPPKGVKLSKPAATTSATTSATTSATTSAG HHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC TASTSTTATAGTTATAPAPAASAPDAATKPAKAKRMTKKEKAAAAAAASADAGASAPAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SSAKATKGSKKKSKKDKAASAAAASGA CHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA