| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066619
Identifier: 78066619
GI number: 78066619
Start: 2196759
End: 2197319
Strand: Direct
Name: 78066619
Synonym: Bcep18194_A5150
Alternate gene names: NA
Gene position: 2196759-2197319 (Clockwise)
Preceding gene: 78066616
Following gene: 78066626
Centisome position: 59.47
GC content: 68.63
Gene sequence:
>561_bases ATGACTGCCCTGCCCGCCTCGCCCGATTCCGCACCGGCCCGCCCTCGCGACACCGAGCCGACCGAAGAGAACATCCGCGA TCTCGTCTACGCGTTCTACGACCGCGTGCGCGCCGATCCGCTGCTCGGGCCCGTGTTCGACGCGAAGCTGGAAGGCCGCT GGGACGACCACCTGCCGAAGATGGTCACGTTCTGGTCGAGCCTCGTGCTCGGCACCAAGGGCTATCGCGGCAACGTGCAG CAGGCGCACCAGCCGCTCGACGGGATCGAGCCCGCCCATTTCAGCCGCTGGCTGTCGCTGTTCCTGAAAACGGTCGAGAC GCGCTACGCGCCGCCCGCAGCGATCCGCTTCATGGAGCCGGCGCTGCGGATCGCGCAGAGCCTCCAGTTGAGCCGGTTCG GCTGGGACTATCAGATTCCGCCCGAGCAGCAGGCACTGCTCGACGCAATCGCACCGCGCCGTCGCGACGCAGCTGACGAT CCGCATGCGCTGCCCTCGCGTGCCCGCGGCGAGCCGTTTCCGACGAAGATCATCGGGCGCAGCAGCGATCCGGACGCGTA A
Upstream 100 bases:
>100_bases AGGGGTTGTTGGACGCTATTTTGCGTCAAAATCCGGCCGGCGTCCTGCACGATGCCCGCGCCGCCGCCCCGTCGTTGCCT ATTTCTCCGGCCCTTTTGCC
Downstream 100 bases:
>100_bases CGGGCAGCCGTGACGCGCGACGCTTGCGCGCACGCGGCACCTCGCCGCACCACCCTCACGCCGTGCTCAGCGCCGCGTAT TGCCCGATTCGATGCCCCAG
Product: globin-like protein
Products: NA
Alternate protein names: Globin-Like Protein; SEC-Independent Protein Translocase Protein TatC; Sec-Independent Protein Translocase Protein TatC; Globin Family Protein; Truncated Hemoglobin-Like Protein; Sec-Independent Protein Translocase Protein Tatc; Protozoan/Cyanobacterial Globin Family Protein; Truncated Hemoglobins; Hemoglobin; Sec-Independent Protein Translocase; Sec-Independent Protein Translocase Protein; Globin Family; SEC-Independent Protein Translocase Protein TATC; Truncated Hemoglobin Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTALPASPDSAPARPRDTEPTEENIRDLVYAFYDRVRADPLLGPVFDAKLEGRWDDHLPKMVTFWSSLVLGTKGYRGNVQ QAHQPLDGIEPAHFSRWLSLFLKTVETRYAPPAAIRFMEPALRIAQSLQLSRFGWDYQIPPEQQALLDAIAPRRRDAADD PHALPSRARGEPFPTKIIGRSSDPDA
Sequences:
>Translated_186_residues MTALPASPDSAPARPRDTEPTEENIRDLVYAFYDRVRADPLLGPVFDAKLEGRWDDHLPKMVTFWSSLVLGTKGYRGNVQ QAHQPLDGIEPAHFSRWLSLFLKTVETRYAPPAAIRFMEPALRIAQSLQLSRFGWDYQIPPEQQALLDAIAPRRRDAADD PHALPSRARGEPFPTKIIGRSSDPDA >Mature_185_residues TALPASPDSAPARPRDTEPTEENIRDLVYAFYDRVRADPLLGPVFDAKLEGRWDDHLPKMVTFWSSLVLGTKGYRGNVQQ AHQPLDGIEPAHFSRWLSLFLKTVETRYAPPAAIRFMEPALRIAQSLQLSRFGWDYQIPPEQQALLDAIAPRRRDAADDP HALPSRARGEPFPTKIIGRSSDPDA
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20927; Mature: 20796
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPASPDSAPARPRDTEPTEENIRDLVYAFYDRVRADPLLGPVFDAKLEGRWDDHLPK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHH MVTFWSSLVLGTKGYRGNVQQAHQPLDGIEPAHFSRWLSLFLKTVETRYAPPAAIRFMEP HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ALRIAQSLQLSRFGWDYQIPPEQQALLDAIAPRRRDAADDPHALPSRARGEPFPTKIIGR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC SSDPDA CCCCCC >Mature Secondary Structure TALPASPDSAPARPRDTEPTEENIRDLVYAFYDRVRADPLLGPVFDAKLEGRWDDHLPK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHH MVTFWSSLVLGTKGYRGNVQQAHQPLDGIEPAHFSRWLSLFLKTVETRYAPPAAIRFMEP HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ALRIAQSLQLSRFGWDYQIPPEQQALLDAIAPRRRDAADDPHALPSRARGEPFPTKIIGR HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC SSDPDA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA