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The map label for this gene is ygeR [H]

Identifier: 78065931

GI number: 78065931

Start: 1419992

End: 1420693

Strand: Reverse

Name: ygeR [H]

Synonym: Bcep18194_A4460

Alternate gene names: 78065931

Gene position: 1420693-1419992 (Counterclockwise)

Preceding gene: 78065932

Following gene: 78065930

Centisome position: 38.46

GC content: 68.8

Gene sequence:

>702_bases
ATGTTCGGAACAACAACGAAGCGACTCTTCGCAGCCGCCTGCGCCGCCCTGCTCGTCGCGTGCGGCTCCGCGCCTGTCGG
CCCCGGGTTCTATCGCGTCGAGCGCGGCGATACGCTCTACAAGATCGCGCGCGACAACCGCACGTCGGTGTCGAACGTCG
TGCGCTGGAACCAGATGACGAACCCCGATGCGATCGAGGTCGGCCAGGTGCTGCGCGTCGCGCCGCCACCCGGCACGACC
ACCGCGTCGACGCCGTCGACCACCGGCACCGGCAGTGCCGGCCGGGCCCGCCCCGCGCCTTCTGCACCGGTCGAATCGGC
CGTCAAGCCGGCCACGAGCATCGCGCTGATCTGGCCGGCAGCCGGCAACGTGATCCGCACGTTCGACGGTTCGAAATCGA
AGGGCATCGACATCGCGAACTCGCCGGGCACGCCGGTGGTCGCGGCTGCGCCGGGTGTGGTGGTCTATGCGGGTAACGGG
CTGCGCGGCTACGGCAACCTGATCATCCTCAAGCACAACGCCGACTACCTGACCGCCTACGCGCACAACCGCGCGCTGCT
GGTGAAGGAAGGCCAGCAGGTCACGCAGGGGCAGTCGATCGCCGAGATGGGCAACAGCGACAGCGATCGCGTCGCGCTGC
ATTTCGAGCTGCGCTACGGCGGCCGATCGATCGACCCGTCACGCTACCTGCCGGCACGTTGA

Upstream 100 bases:

>100_bases
CCGGCAACGGCCCAAACTGCGGTGCGCGGGTCGAACCCGTTAAAATCGGACGTTTTGTGTTGCCTGCCGCGTCACGAGCG
GCAGGGTTTTGCGAGGTTCA

Downstream 100 bases:

>100_bases
GCGCCCGATGGGCGACACGCGATGCCGGCACGCATCGCGTGTCGTCGCGGTGAAAATCGGGAAAGGTGATGTCAGCGCTT
GCGCAGACGTCCGGTGAACC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MFGTTTKRLFAAACAALLVACGSAPVGPGFYRVERGDTLYKIARDNRTSVSNVVRWNQMTNPDAIEVGQVLRVAPPPGTT
TASTPSTTGTGSAGRARPAPSAPVESAVKPATSIALIWPAAGNVIRTFDGSKSKGIDIANSPGTPVVAAAPGVVVYAGNG
LRGYGNLIILKHNADYLTAYAHNRALLVKEGQQVTQGQSIAEMGNSDSDRVALHFELRYGGRSIDPSRYLPAR

Sequences:

>Translated_233_residues
MFGTTTKRLFAAACAALLVACGSAPVGPGFYRVERGDTLYKIARDNRTSVSNVVRWNQMTNPDAIEVGQVLRVAPPPGTT
TASTPSTTGTGSAGRARPAPSAPVESAVKPATSIALIWPAAGNVIRTFDGSKSKGIDIANSPGTPVVAAAPGVVVYAGNG
LRGYGNLIILKHNADYLTAYAHNRALLVKEGQQVTQGQSIAEMGNSDSDRVALHFELRYGGRSIDPSRYLPAR
>Mature_233_residues
MFGTTTKRLFAAACAALLVACGSAPVGPGFYRVERGDTLYKIARDNRTSVSNVVRWNQMTNPDAIEVGQVLRVAPPPGTT
TASTPSTTGTGSAGRARPAPSAPVESAVKPATSIALIWPAAGNVIRTFDGSKSKGIDIANSPGTPVVAAAPGVVVYAGNG
LRGYGNLIILKHNADYLTAYAHNRALLVKEGQQVTQGQSIAEMGNSDSDRVALHFELRYGGRSIDPSRYLPAR

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=205, Percent_Identity=45.8536585365854, Blast_Score=174, Evalue=3e-45,
Organism=Escherichia coli, GI1789099, Length=257, Percent_Identity=36.9649805447471, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI87082297, Length=120, Percent_Identity=34.1666666666667, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 24350; Mature: 24350

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGTTTKRLFAAACAALLVACGSAPVGPGFYRVERGDTLYKIARDNRTSVSNVVRWNQMT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHEECCCCC
NPDAIEVGQVLRVAPPPGTTTASTPSTTGTGSAGRARPAPSAPVESAVKPATSIALIWPA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECC
AGNVIRTFDGSKSKGIDIANSPGTPVVAAAPGVVVYAGNGLRGYGNLIILKHNADYLTAY
CCCEEEECCCCCCCCCEECCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEECCCEEEEE
AHNRALLVKEGQQVTQGQSIAEMGNSDSDRVALHFELRYGGRSIDPSRYLPAR
ECCEEEEEECCCCHHCCCHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MFGTTTKRLFAAACAALLVACGSAPVGPGFYRVERGDTLYKIARDNRTSVSNVVRWNQMT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHEECCCCC
NPDAIEVGQVLRVAPPPGTTTASTPSTTGTGSAGRARPAPSAPVESAVKPATSIALIWPA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECC
AGNVIRTFDGSKSKGIDIANSPGTPVVAAAPGVVVYAGNGLRGYGNLIILKHNADYLTAY
CCCEEEECCCCCCCCCEECCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEECCCEEEEE
AHNRALLVKEGQQVTQGQSIAEMGNSDSDRVALHFELRYGGRSIDPSRYLPAR
ECCEEEEEECCCCHHCCCHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]