| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yeaD [C]
Identifier: 78065932
GI number: 78065932
Start: 1420846
End: 1421757
Strand: Reverse
Name: yeaD [C]
Synonym: Bcep18194_A4461
Alternate gene names: 78065932
Gene position: 1421757-1420846 (Counterclockwise)
Preceding gene: 78065934
Following gene: 78065931
Centisome position: 38.49
GC content: 70.18
Gene sequence:
>912_bases ATGCCGACCTTCCAGCAACACGAGATTCACGAACTTCACGCCGGCCCGTCGCTCGTCCGGGTCGCTCCGCAATTCGGCGG CCGCCTGCTGTCGTGGCATGTCGACGGCGAACCGGTGATCTTCTGGCCGGAAACGGCCGACTGGAGCAACCTCGCGCGCG TGCGCGGCGGCAACCCGCTGCTGTTCCCGTTTCTCGGCCGTCACCGCGTCGACGGCGAACTCGGCCGCTGGCGCGACGCC GCGGGCGTGGTGCGCGACCTGCCGATGCACGGCTTCGCGCGCGACCTGCCGTTCGCCGCGCAACCGTCGGCCGATGGCGC CGCGCTGTCGATGACGCTCGACGCGACCGACGCCCTGCGCGCAAGTTACCCGTTCGACTTCCGCTTCGAAACGACCTACC GGCTGGCCGACTCGCACACGCTCGAAGTCGCGCTGACGACGACCAATCGCGGCGACACGCCGCTGCCCTACTACGCCGGC CACCATTTCTATTTCGCGCTGCCGGACGGCGAACGCGCCGAAACCACGCTCGAGCTGCCGCCGACGCGTCGTTGCGCACA GCAGGCGGACGGTTCGATCAGTGCGCCCGAACCGGGCGAAGCCCGTTATCGCCTCGACAACCCGGACATCCTCGACCGCT TCCACTGCCTCGACGGCGTGCCGGCCACGCCGGTGCGCATCGTGATGCCGGGCCGCGGCCGCACGATCGAGATCGCGCTC GACGTGCCGGGTTCGATCCCGTGGTACGCGGTGACGACCTGGACCGAGAAGCCCGATTCGGACTTCTATTGCGTCGAACC GTGGCTCGGCCTGCCGGACGCGATCCACAACGGCCTCGGGCTGCGCATGCTCGCGCCGGGCGCGACCGAAACCGCCACGC TGCGGATCCGCGTCCTCCCGCTCGCCGGCTGA
Upstream 100 bases:
>100_bases TCTTAAAAACTCGCGATTTCCCGAGAAGGGTTTTCCCCGAGCCGCCACGGCCCGATAATGGAGCGCGCCGTTCCCGTCCA CCCGCCCAACCCGATTCGCC
Downstream 100 bases:
>100_bases TACGTAGGCCGAGACGTCATCAAGCAGCGCGCCGAACCGGCGCGCCGCAGCCCCGGCAACGGCCCAAACTGCGGTGCGCG GGTCGAACCCGTTAAAATCG
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Aldose 1-Epimerase Family Protein; Galactose Mutarotase-Like Protein; Galactose Mutarotase; Aldose 1-Epimerase Subfamily Protein; Galactose Mutarotase-Related; Aldose 1-Epimerase Subfamily; Aldose Epimerase; Aldose 1-Epimerase/Galactose Mutarotase; Aldose Epimerase Or Galactose Mutarotase
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPTFQQHEIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPLLFPFLGRHRVDGELGRWRDA AGVVRDLPMHGFARDLPFAAQPSADGAALSMTLDATDALRASYPFDFRFETTYRLADSHTLEVALTTTNRGDTPLPYYAG HHFYFALPDGERAETTLELPPTRRCAQQADGSISAPEPGEARYRLDNPDILDRFHCLDGVPATPVRIVMPGRGRTIEIAL DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVLPLAG
Sequences:
>Translated_303_residues MPTFQQHEIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPLLFPFLGRHRVDGELGRWRDA AGVVRDLPMHGFARDLPFAAQPSADGAALSMTLDATDALRASYPFDFRFETTYRLADSHTLEVALTTTNRGDTPLPYYAG HHFYFALPDGERAETTLELPPTRRCAQQADGSISAPEPGEARYRLDNPDILDRFHCLDGVPATPVRIVMPGRGRTIEIAL DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVLPLAG >Mature_302_residues PTFQQHEIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPLLFPFLGRHRVDGELGRWRDAA GVVRDLPMHGFARDLPFAAQPSADGAALSMTLDATDALRASYPFDFRFETTYRLADSHTLEVALTTTNRGDTPLPYYAGH HFYFALPDGERAETTLELPPTRRCAQQADGSISAPEPGEARYRLDNPDILDRFHCLDGVPATPVRIVMPGRGRTIEIALD VPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVLPLAG
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33496; Mature: 33365
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFQQHEIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPL CCCCCCCCHHHHHCCCCEEEECHHHCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCCEE LFPFLGRHRVDGELGRWRDAAGVVRDLPMHGFARDLPFAAQPSADGAALSMTLDATDALR EEECCCCEECCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEECCCHHHH ASYPFDFRFETTYRLADSHTLEVALTTTNRGDTPLPYYAGHHFYFALPDGERAETTLELP HCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCEECCCEEEEECCCCCCCCEEEECC PTRRCAQQADGSISAPEPGEARYRLDNPDILDRFHCLDGVPATPVRIVMPGRGRTIEIAL CCHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVLP ECCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCEEEECCCCCCEEEEEEEEEE LAG CCC >Mature Secondary Structure PTFQQHEIHELHAGPSLVRVAPQFGGRLLSWHVDGEPVIFWPETADWSNLARVRGGNPL CCCCCCCHHHHHCCCCEEEECHHHCCEEEEEEECCCEEEECCCCCCHHHHHHHCCCCEE LFPFLGRHRVDGELGRWRDAAGVVRDLPMHGFARDLPFAAQPSADGAALSMTLDATDALR EEECCCCEECCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEEECCCHHHH ASYPFDFRFETTYRLADSHTLEVALTTTNRGDTPLPYYAGHHFYFALPDGERAETTLELP HCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCEECCCEEEEECCCCCCCCEEEECC PTRRCAQQADGSISAPEPGEARYRLDNPDILDRFHCLDGVPATPVRIVMPGRGRTIEIAL CCHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE DVPGSIPWYAVTTWTEKPDSDFYCVEPWLGLPDAIHNGLGLRMLAPGATETATLRIRVLP ECCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCEEEECCCCCCEEEEEEEEEE LAG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA