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The map label for this gene is yddA [C]

Identifier: 78064984

GI number: 78064984

Start: 375364

End: 377133

Strand: Reverse

Name: yddA [C]

Synonym: Bcep18194_A3507

Alternate gene names: 78064984

Gene position: 377133-375364 (Counterclockwise)

Preceding gene: 78065014

Following gene: 78064983

Centisome position: 10.21

GC content: 65.71

Gene sequence:

>1770_bases
ATGACCCAATCGATCGATCCCGTCCGCTCCGCCTCCGACGCGCCGCAGGACGAGCGTCCGGTATCCGCATGGAGCCTCAT
CAAGCCCTACTGGGTATCGTCCGAATGGAAAATCGCATGGGGGCTGCTGGTCACGATCATCGCGATCAACCTCTGCGTCG
TCTGGATCAACGTCCGGCTGAACAAGTGGAACGCGGAGTTCTACAACGCGCTGCAATCGAAGGACGTCCACGACTTCCCG
AACCTGCTGATGCAGTTCTCCGCGCTCGCGTTCGCCTTCATCATCCTCGCCGTGTACGGCCGCTACCTGCGGCAGATGCT
CGGCTTCCGCTGGCGCCAGTGGCTCACCGACCGCTTTCTCGGCCAGTGGCTCGGCGATCGCGCGTTCTACCGGATCGAGC
GTGACCGCCTCGCCGACAACCCCGACCAGCGGATCACCGACGACCTCCAGTCGTTCGCGACGACCACGCTCGCGCTATCG
CTCGACCTGCTGTCGACGGTCGTCACGCTCGTGTCGTTCATCACGATCCTGTGGTCGCTCGCCGGCGCGCTGACGGTTTC
GCTCGGCGCGACGCCGATCGCGATCCCCGGCTACATGGTGTGGGCGGCCGCGCTGTACGCGGTGATCGGCTCGCTGATCA
TCCAGAAGGTCGGCCATCCGCTCGTGTCGATCAACTACCAGCAGCAGCGCGTCGAGGCCGACTTCCGCTTCGGGCTGATC
CGCGTGCGCGAGAACGCCGAGCAGATCGCGTTCTACGACGGCGAGAAGACCGAGACCGGCAACGCGCAGAACCTCTTCGC
GCGCATCCGCGACAACTGGTGGCGCGTGATGAAGTACACGAAGCGGCTCACGTTCGTGCTGAGCTTCTACGGGCAGATCG
CGATCATCTTCCCGCTCGTCGTCGCCGCGCCGCGCTATTTCGCGGGCGCGTTCTCGTTCGGCGTGCTGATGCAGATCTCG
TCCGCGTTCGGCACCGTCAGCGATTCGTTCTCGTGGTTCATCAACAGTTACTCGACCCTCGTCGAATGGCGCGCCACCGT
CAACCGTCTGCGCGAATTCAAGCGCGTGATGGGCACGTCGCACCTGAAGGAAAGCCTGTCGCCCGCGACCGAGCACGGCG
GCATCAACCTGCACTACGTCGACGACGCGAAGCTGTCGACGTCGTCGCTCAAGCTCGCGCTGCCGAACGGCAACGCGCTC
GCGAACATCGGCAGCGTCACGATCGAGCCCGGCTCGCGCTGGCTCGTGATCGGCAAGTCGGGTTCCGGCAAGAGCACGTT
CATGCGCGCGCTCGCGGGCCTGTGGCCATTCGGCGACGGTGCGATCGATGCGCCGGTCGGCGCGCGGATGATGTTCGTGC
CGCAGACGAGCTATCTGCCGATCGGCACGCTGAAGGCCGCGCTCACCTATCCGGCGACACCCGATACGTTCAGCGACGAT
GCCTGCCGCGACGCGCTGCGTGCATGCCGCCTCGAGGATTACGTCGACCGCCTCGACGAGACCGCGCACTGGACCCGCGT
GCTGTCGCCGGGCGAACAGCAGCGCCTGGCCGGTGCGCGCGTGCTGCTGCACAAGCCCGACTTCCTGTTCCTCGACGAAG
CGACCAGCGCGCTCGACGCCGACAACGAAGCACGCCTGTATCACCTGTTCGCCGAACGGCTGCCGAAGGCCGCGATCGTC
AGCATCGCGCACCGCGAGTCACTGGCCGCGTTCCACGTCGGCACGATCAACGTCGAGCGCGTGAACGACAGCGACAAGGT
CGCGGCTTGA

Upstream 100 bases:

>100_bases
CGGACGCCCGCCGTCAGTCGGCGCCGCGTCCCGGCATGCCGTATCGCGGCGCGCGCCCGGCTTCGCCCGGCCCGCACGCC
GGCTACTCATCAGGAAGCAC

Downstream 100 bases:

>100_bases
GCGCACGCGCCGCGCACATCGCACGGATCGCGCTGATCACCGGCGCGGGTTCCGGGATCGGCGCGGCGCTCGCGCGGCGG
CTCGCGGCACCCGGCATCGC

Product: ABC transporter, fused ATPase and inner membrane subunits

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRLNKWNAEFYNALQSKDVHDFP
NLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFLGQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALS
LDLLSTVVTLVSFITILWSLAGALTVSLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
RVRENAEQIAFYDGEKTETGNAQNLFARIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLVVAAPRYFAGAFSFGVLMQIS
SAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTSHLKESLSPATEHGGINLHYVDDAKLSTSSLKLALPNGNAL
ANIGSVTIEPGSRWLVIGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDD
ACRDALRACRLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYHLFAERLPKAAIV
SIAHRESLAAFHVGTINVERVNDSDKVAA

Sequences:

>Translated_589_residues
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRLNKWNAEFYNALQSKDVHDFP
NLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFLGQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALS
LDLLSTVVTLVSFITILWSLAGALTVSLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
RVRENAEQIAFYDGEKTETGNAQNLFARIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLVVAAPRYFAGAFSFGVLMQIS
SAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTSHLKESLSPATEHGGINLHYVDDAKLSTSSLKLALPNGNAL
ANIGSVTIEPGSRWLVIGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDD
ACRDALRACRLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYHLFAERLPKAAIV
SIAHRESLAAFHVGTINVERVNDSDKVAA
>Mature_588_residues
TQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRLNKWNAEFYNALQSKDVHDFPN
LLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFLGQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALSL
DLLSTVVTLVSFITILWSLAGALTVSLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLIR
VRENAEQIAFYDGEKTETGNAQNLFARIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLVVAAPRYFAGAFSFGVLMQISS
AFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTSHLKESLSPATEHGGINLHYVDDAKLSTSSLKLALPNGNALA
NIGSVTIEPGSRWLVIGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDDA
CRDALRACRLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYHLFAERLPKAAIVS
IAHRESLAAFHVGTINVERVNDSDKVAA

Specific function: Unknown

COG id: COG4178

COG function: function code R; ABC-type uncharacterized transport system, permease and ATPase components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4826958, Length=549, Percent_Identity=26.5938069216758, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI4506341, Length=604, Percent_Identity=23.5099337748344, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI9945308, Length=524, Percent_Identity=26.3358778625954, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI7262393, Length=587, Percent_Identity=24.8722316865417, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI255708477, Length=180, Percent_Identity=31.6666666666667, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI148612844, Length=180, Percent_Identity=31.6666666666667, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI9955966, Length=245, Percent_Identity=28.1632653061224, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI45243524, Length=245, Percent_Identity=28.1632653061224, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI9955968, Length=245, Percent_Identity=28.1632653061224, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI134142340, Length=424, Percent_Identity=24.7641509433962, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI134142342, Length=424, Percent_Identity=24.7641509433962, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI134142337, Length=424, Percent_Identity=24.7641509433962, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI134142345, Length=424, Percent_Identity=24.7641509433962, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI9955963, Length=180, Percent_Identity=31.6666666666667, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI1787772, Length=544, Percent_Identity=33.0882352941176, Blast_Score=307, Evalue=1e-84,
Organism=Escherichia coli, GI1786575, Length=336, Percent_Identity=25, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787112, Length=200, Percent_Identity=30.5, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787143, Length=383, Percent_Identity=22.7154046997389, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787547, Length=211, Percent_Identity=27.4881516587678, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786654, Length=216, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17542146, Length=574, Percent_Identity=24.7386759581882, Blast_Score=173, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17532409, Length=530, Percent_Identity=26.2264150943396, Blast_Score=164, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17532411, Length=527, Percent_Identity=25.8064516129032, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17558960, Length=585, Percent_Identity=27.8632478632479, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17564250, Length=569, Percent_Identity=25.8347978910369, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI72000520, Length=550, Percent_Identity=25.0909090909091, Blast_Score=116, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI72000518, Length=595, Percent_Identity=25.2100840336134, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71992285, Length=206, Percent_Identity=33.495145631068, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25146765, Length=258, Percent_Identity=25.968992248062, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71992070, Length=258, Percent_Identity=25.968992248062, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI86564969, Length=258, Percent_Identity=25.968992248062, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71992066, Length=258, Percent_Identity=25.968992248062, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=272, Percent_Identity=26.8382352941176, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71992080, Length=258, Percent_Identity=25.968992248062, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17556528, Length=416, Percent_Identity=25, Blast_Score=71, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325110, Length=176, Percent_Identity=34.6590909090909, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324985, Length=252, Percent_Identity=28.1746031746032, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322980, Length=273, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24643394, Length=504, Percent_Identity=25.7936507936508, Blast_Score=168, Evalue=8e-42,
Organism=Drosophila melanogaster, GI24638550, Length=555, Percent_Identity=25.4054054054054, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24638552, Length=555, Percent_Identity=25.4054054054054, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24638554, Length=555, Percent_Identity=25.4054054054054, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24638546, Length=555, Percent_Identity=25.4054054054054, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24638556, Length=555, Percent_Identity=25.4054054054054, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24638548, Length=555, Percent_Identity=25.4054054054054, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24638558, Length=528, Percent_Identity=25.7575757575758, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI21357907, Length=190, Percent_Identity=32.1052631578947, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552351, Length=429, Percent_Identity=23.7762237762238, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45552339, Length=429, Percent_Identity=23.7762237762238, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI23397593, Length=414, Percent_Identity=23.9130434782609, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010509
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF06472 ABC_membrane_2; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 65916; Mature: 65785

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRL
CCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE
NKWNAEFYNALQSKDVHDFPNLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFL
ECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALSLDLLSTVVTLVSFITILWSL
HHHHCCHHHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGALTVSLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
HHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEEE
RVRENAEQIAFYDGEKTETGNAQNLFARIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLV
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPRYFAGAFSFGVLMQISSAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTS
HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
HLKESLSPATEHGGINLHYVDDAKLSTSSLKLALPNGNALANIGSVTIEPGSRWLVIGKS
HHHHHCCCCHHCCCEEEEEECCCCCCCCCEEEECCCCCCEEECCEEEECCCCEEEEEECC
GSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDD
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHEECCCCCCCCCCH
ACRDALRACRLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEECHHHHCCC
DNEARLYHLFAERLPKAAIVSIAHRESLAAFHVGTINVERVNDSDKVAA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
TQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRL
CCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE
NKWNAEFYNALQSKDVHDFPNLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFL
ECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALSLDLLSTVVTLVSFITILWSL
HHHHCCHHHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGALTVSLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
HHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEEE
RVRENAEQIAFYDGEKTETGNAQNLFARIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLV
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPRYFAGAFSFGVLMQISSAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTS
HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
HLKESLSPATEHGGINLHYVDDAKLSTSSLKLALPNGNALANIGSVTIEPGSRWLVIGKS
HHHHHCCCCHHCCCEEEEEECCCCCCCCCEEEECCCCCCEEECCEEEECCCCEEEEEECC
GSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDD
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHEECCCCCCCCCCH
ACRDALRACRLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEECHHHHCCC
DNEARLYHLFAERLPKAAIVSIAHRESLAAFHVGTINVERVNDSDKVAA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]