| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fabG [H]
Identifier: 78064983
GI number: 78064983
Start: 374591
End: 375367
Strand: Reverse
Name: fabG [H]
Synonym: Bcep18194_A3506
Alternate gene names: 78064983
Gene position: 375367-374591 (Counterclockwise)
Preceding gene: 78064984
Following gene: 78064982
Centisome position: 10.16
GC content: 74.26
Gene sequence:
>777_bases TTGAGCGCACGCGCCGCGCACATCGCACGGATCGCGCTGATCACCGGCGCGGGTTCCGGGATCGGCGCGGCGCTCGCGCG GCGGCTCGCGGCACCCGGCATCGCGTTGGCGCTGCATGCGCGCGGCGCGGACGAAGCGGCGCGCGACCGGCTCGCCGAAG TCGCCCACACTTGCACGGCGGCGGGTGCGGAATGCGTCACGCTCACCGGCGATCTCGGTGAACCGGGCGTCGCCGCGTCG CTCGTCGACGCAACCGTCGCGCACTTTGGCGGGCTCGATCAGCTCGTCGCCAATGCCGGCTTCGCCGCGCGGCAATCCTT TTCCGGTCTTTCCGCGGACGCGCTCGCGTCCGCCTTCGCGGCGATGCCCGGTGCGTTCTCCGCACTCGCGGGCCGCGCGC GGCCGCTGCTCGAAGCGTCGGCTGCGCCGCGGATCGTCGCGGTCAGCTCGTTCGTCGCGCACCGCTACCGCGCCGACGCG CCGTTCGCGGCCACCGCCGCGGCGAAGGCCGCGCTCGAATCGCTCGTGCGCACCGCCGCCGCCGAATTCGCCGCGCGCGG CATCACCGTCAACGCGGTCGCGCCGGGCTTCACGCGCAAGGACCACGGGCCGAGCGCCGGCAATGCCGCCGCGTGGGCGC AGGCCGAACAGGCGACACCGCTCGGCCGGATCGCCGAACCCGACGACGTCGCGGCACTGATCGTGTTCCTGCTGTCGGAC GCCGCGCGACAGATCACCGGCCAGGTCATTCACGTCGACGGTGGCCTGACGCTCTGA
Upstream 100 bases:
>100_bases AGGCCGCGATCGTCAGCATCGCGCACCGCGAGTCACTGGCCGCGTTCCACGTCGGCACGATCAACGTCGAGCGCGTGAAC GACAGCGACAAGGTCGCGGC
Downstream 100 bases:
>100_bases GGCAAATGCCGGCGCGCCTGCCGGCGCGTGGATCGTCACCGTCACCAGGGCCTGCATCGCCCCCACGCGCGATCGGCCGT CACGCCTTCCCCGAACGAAC
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSARAAHIARIALITGAGSGIGAALARRLAAPGIALALHARGADEAARDRLAEVAHTCTAAGAECVTLTGDLGEPGVAAS LVDATVAHFGGLDQLVANAGFAARQSFSGLSADALASAFAAMPGAFSALAGRARPLLEASAAPRIVAVSSFVAHRYRADA PFAATAAAKAALESLVRTAAAEFAARGITVNAVAPGFTRKDHGPSAGNAAAWAQAEQATPLGRIAEPDDVAALIVFLLSD AARQITGQVIHVDGGLTL
Sequences:
>Translated_258_residues MSARAAHIARIALITGAGSGIGAALARRLAAPGIALALHARGADEAARDRLAEVAHTCTAAGAECVTLTGDLGEPGVAAS LVDATVAHFGGLDQLVANAGFAARQSFSGLSADALASAFAAMPGAFSALAGRARPLLEASAAPRIVAVSSFVAHRYRADA PFAATAAAKAALESLVRTAAAEFAARGITVNAVAPGFTRKDHGPSAGNAAAWAQAEQATPLGRIAEPDDVAALIVFLLSD AARQITGQVIHVDGGLTL >Mature_257_residues SARAAHIARIALITGAGSGIGAALARRLAAPGIALALHARGADEAARDRLAEVAHTCTAAGAECVTLTGDLGEPGVAASL VDATVAHFGGLDQLVANAGFAARQSFSGLSADALASAFAAMPGAFSALAGRARPLLEASAAPRIVAVSSFVAHRYRADAP FAATAAAKAALESLVRTAAAEFAARGITVNAVAPGFTRKDHGPSAGNAAAWAQAEQATPLGRIAEPDDVAALIVFLLSDA ARQITGQVIHVDGGLTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=30.3643724696356, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI32483357, Length=268, Percent_Identity=29.4776119402985, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=26.4150943396226, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI7705925, Length=258, Percent_Identity=31.0077519379845, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI40254992, Length=257, Percent_Identity=28.0155642023346, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=28.8537549407115, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=33.0708661417323, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=32.1285140562249, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1787335, Length=263, Percent_Identity=32.319391634981, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI87082100, Length=260, Percent_Identity=32.6923076923077, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=28.1746031746032, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=32.6693227091633, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=29.2682926829268, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI2367365, Length=258, Percent_Identity=29.4573643410853, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1786812, Length=259, Percent_Identity=30.5019305019305, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=28.0632411067194, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787545, Length=265, Percent_Identity=27.9245283018868, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17560332, Length=272, Percent_Identity=33.8235294117647, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=28.4090909090909, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=28.9473684210526, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=30.5660377358491, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=27.4809160305344, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=29.811320754717, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=30.188679245283, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17560676, Length=261, Percent_Identity=31.0344827586207, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71994600, Length=259, Percent_Identity=30.1158301158301, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=27.9693486590038, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=28.6792452830189, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=30.0751879699248, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=29.811320754717, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=28.8461538461538, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=29.1338582677165, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=30.9963099630996, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71994604, Length=258, Percent_Identity=29.4573643410853, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=28.6274509803922, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=28.4644194756554, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=29.5019157088123, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=29.0566037735849, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=26.7924528301887, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=28.8389513108614, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=30.6513409961686, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25147288, Length=263, Percent_Identity=26.2357414448669, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=27.6679841897233, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=27.7153558052434, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=32.0158102766798, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=31.3492063492063, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=32.5396825396825, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=30.3501945525292, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=31.7460317460317, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=32.0158102766798, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=29.2490118577075, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643142, Length=256, Percent_Identity=28.90625, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25599; Mature: 25468
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARAAHIARIALITGAGSGIGAALARRLAAPGIALALHARGADEAARDRLAEVAHTCTA CCCCHHHHHEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH AGAECVTLTGDLGEPGVAASLVDATVAHFGGLDQLVANAGFAARQSFSGLSADALASAFA CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHH AMPGAFSALAGRARPLLEASAAPRIVAVSSFVAHRYRADAPFAATAAAKAALESLVRTAA HCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AEFAARGITVNAVAPGFTRKDHGPSAGNAAAWAQAEQATPLGRIAEPDDVAALIVFLLSD HHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AARQITGQVIHVDGGLTL HHHHHCCEEEEECCCCCC >Mature Secondary Structure SARAAHIARIALITGAGSGIGAALARRLAAPGIALALHARGADEAARDRLAEVAHTCTA CCCHHHHHEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH AGAECVTLTGDLGEPGVAASLVDATVAHFGGLDQLVANAGFAARQSFSGLSADALASAFA CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHH AMPGAFSALAGRARPLLEASAAPRIVAVSSFVAHRYRADAPFAATAAAKAALESLVRTAA HCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AEFAARGITVNAVAPGFTRKDHGPSAGNAAAWAQAEQATPLGRIAEPDDVAALIVFLLSD HHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AARQITGQVIHVDGGLTL HHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]