| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is actP [H]
Identifier: 78049828
GI number: 78049828
Start: 4904973
End: 4906700
Strand: Reverse
Name: actP [H]
Synonym: XCV4272
Alternate gene names: 78049828
Gene position: 4906700-4904973 (Counterclockwise)
Preceding gene: 78049829
Following gene: 78049826
Centisome position: 94.75
GC content: 64.7
Gene sequence:
>1728_bases ATGAGCAAGACTTCGCGCCTTCTCCTGATCCTGGCCGGCCTGGTGCCTGCCGGCATCGCGCTGGCCGCCGGCGGCGACCT GGGCCAGGTCGACAAGCAGCCCACCAACTGGGTGGCGATTGCCATGTTCGGCTTCTTCGTGCTGGCCACCCTGTGGATCA CCAAATGGGCGGCGGCCAAGACCAAGTCGGCCGCCGACTTCTATACCGCTGGCGGTGGCATCACCGGTTTCCAGAACGGC CTGGCGATCGCTGGCGACTTCATGTCGGCGGCCTCGTTCCTGGGCATCACCGCTGCGGTGATGGCCAACGGCTACGACGG CCTGATCTATGCGATCGGTTTTCTGGTCGGCTGGCCCATCCTGACCTTCCTGATGGCCGAACGCCTGCGCAACCTCGGCA AGTACACCTTCGCCGACGTGGCCGGTTACCGCTTCGCGCCCACAGCGATCCGCAGCTTTGCGGCGTCGGGCACCTTGGTG GTGGTGCTGTTCTATCTGATCGCACAGATGGTCGGTGCCGGTGCGCTGATCAAGTTGCTGTTCGGCCTGGACTACTGGGT GGCGGTGACCCTGGTCGGCGTGCTGATGATGATCTACGTGTTGTTCGGCGGCATGACCGCAACGACCTGGGTGCAGATCA TCAAGGCCGTGCTGCTGCTGACCGGCGTGACCTTCATGGCCGTGGCGATCATGTGGCATTTCAACTTCAGCTTCGAGGCG CTGTTTGCCGAAGGCGTGCGGGTGAAAACCGCGGTCGCGGCCAGCGGTGGCGCTTCGCCCGAGGATGCGGCAAAAGCAGG CTTGTCGATCATGGGGCCGGGCGGTTTCGTCAAGGACCCGATTTCGGCGATTTCCTTCGGCATGGCGCTGATGTTCGGTA CCGCCGGCCTGCCGCACATCCTGATGCGCTTCTTCACCGTTCCCGATGCCAAGCAGGCACGCAAGTCGGTGCTGTGGGCC ACCACCTGGATCGGGTACTTCTACATCCTGATCTTCATCATCGGCTTCGGTGCGATCGCACTGGTGTTGACCAACCCGCA GTTCGCCGATGTCGCCACCGGCACCATCCACGGCGGCAAGGGCGCGGCCAACATGGCGGCGGTGCTGGTCGGCAACGCGG TGGGCGGCAACGTGTTCATGGGCTTCATCTCGGCGGTGGCCTTCGCCACCATCCTGGCGGTGGTGGCCGGCCTGACCCTG TCCGGCGCCTCGGCGGTGTCGCATGACCTGTATGCCACGGTGATCAAGAAGGGCAACCCGGCGCCTGGTTCGGAGCTCAA GGTCTCGCGTGCCACCACCCTGGTGCTGGGCGTGATCGCGGTGCTGCTGGGCATCGTGTTCGAGAAGCAGAACGTTGCCT TCATGGTGTCGCTGGCCTTCGCCATCGCCGCCTCGGCCAACTTCCCGGTGCTGATCCTGTCGTTGCTGTGGAAGAACTGC ACCACCCGTGGTGCAGTGACCGGTGGTTTCCTCGGCCTGATCTCCTCGCTGGTGCTGACGATCCTGTCGCCGTCGGTGTG GGTGGACACGCTGGGCAACGCGGCCGGCTCGGCGCCGTTCCCGTACACCTCGCCGGCGCTGTTCTCGATGACGATTGGTT TTGTCGGCATCTGGTTGTTCTCGGTGCTGGATCGCAGCCCGCAGGCAGCCAACGAACGCGCTGCCTTCAAGGCGCAGCAG ATCCGTGCCGAAACCGGCCTGGGTGCCAGTGGCGCCTCCGGTCACTGA
Upstream 100 bases:
>100_bases GAGTGATGGTGTTCACCATCGTCATCACCGCCATCTACGTGCGTCGCGCCAACAACACCTACGACCAGCTGACCGCGCAG ATCCTGGAGGAAGCCCGCAA
Downstream 100 bases:
>100_bases TCGACGGGTTGATGGTTGCTGTGATCGCAGAACGCCGGCCCAGTGCCGGCGTTCTGCGTTTTGGCGATGCCGCCGCTGTT GGGGCGGCCCGGCCAGGAAC
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MSKTSRLLLILAGLVPAGIALAAGGDLGQVDKQPTNWVAIAMFGFFVLATLWITKWAAAKTKSAADFYTAGGGITGFQNG LAIAGDFMSAASFLGITAAVMANGYDGLIYAIGFLVGWPILTFLMAERLRNLGKYTFADVAGYRFAPTAIRSFAASGTLV VVLFYLIAQMVGAGALIKLLFGLDYWVAVTLVGVLMMIYVLFGGMTATTWVQIIKAVLLLTGVTFMAVAIMWHFNFSFEA LFAEGVRVKTAVAASGGASPEDAAKAGLSIMGPGGFVKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKQARKSVLWA TTWIGYFYILIFIIGFGAIALVLTNPQFADVATGTIHGGKGAANMAAVLVGNAVGGNVFMGFISAVAFATILAVVAGLTL SGASAVSHDLYATVIKKGNPAPGSELKVSRATTLVLGVIAVLLGIVFEKQNVAFMVSLAFAIAASANFPVLILSLLWKNC TTRGAVTGGFLGLISSLVLTILSPSVWVDTLGNAAGSAPFPYTSPALFSMTIGFVGIWLFSVLDRSPQAANERAAFKAQQ IRAETGLGASGASGH
Sequences:
>Translated_575_residues MSKTSRLLLILAGLVPAGIALAAGGDLGQVDKQPTNWVAIAMFGFFVLATLWITKWAAAKTKSAADFYTAGGGITGFQNG LAIAGDFMSAASFLGITAAVMANGYDGLIYAIGFLVGWPILTFLMAERLRNLGKYTFADVAGYRFAPTAIRSFAASGTLV VVLFYLIAQMVGAGALIKLLFGLDYWVAVTLVGVLMMIYVLFGGMTATTWVQIIKAVLLLTGVTFMAVAIMWHFNFSFEA LFAEGVRVKTAVAASGGASPEDAAKAGLSIMGPGGFVKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKQARKSVLWA TTWIGYFYILIFIIGFGAIALVLTNPQFADVATGTIHGGKGAANMAAVLVGNAVGGNVFMGFISAVAFATILAVVAGLTL SGASAVSHDLYATVIKKGNPAPGSELKVSRATTLVLGVIAVLLGIVFEKQNVAFMVSLAFAIAASANFPVLILSLLWKNC TTRGAVTGGFLGLISSLVLTILSPSVWVDTLGNAAGSAPFPYTSPALFSMTIGFVGIWLFSVLDRSPQAANERAAFKAQQ IRAETGLGASGASGH >Mature_574_residues SKTSRLLLILAGLVPAGIALAAGGDLGQVDKQPTNWVAIAMFGFFVLATLWITKWAAAKTKSAADFYTAGGGITGFQNGL AIAGDFMSAASFLGITAAVMANGYDGLIYAIGFLVGWPILTFLMAERLRNLGKYTFADVAGYRFAPTAIRSFAASGTLVV VLFYLIAQMVGAGALIKLLFGLDYWVAVTLVGVLMMIYVLFGGMTATTWVQIIKAVLLLTGVTFMAVAIMWHFNFSFEAL FAEGVRVKTAVAASGGASPEDAAKAGLSIMGPGGFVKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKQARKSVLWAT TWIGYFYILIFIIGFGAIALVLTNPQFADVATGTIHGGKGAANMAAVLVGNAVGGNVFMGFISAVAFATILAVVAGLTLS GASAVSHDLYATVIKKGNPAPGSELKVSRATTLVLGVIAVLLGIVFEKQNVAFMVSLAFAIAASANFPVLILSLLWKNCT TRGAVTGGFLGLISSLVLTILSPSVWVDTLGNAAGSAPFPYTSPALFSMTIGFVGIWLFSVLDRSPQAANERAAFKAQQI RAETGLGASGASGH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=477, Percent_Identity=23.6897274633124, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1790503, Length=571, Percent_Identity=62.8721541155867, Blast_Score=677, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=513, Percent_Identity=23.7816764132554, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 59743; Mature: 59612
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTSRLLLILAGLVPAGIALAAGGDLGQVDKQPTNWVAIAMFGFFVLATLWITKWAAAK CCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC TKSAADFYTAGGGITGFQNGLAIAGDFMSAASFLGITAAVMANGYDGLIYAIGFLVGWPI CCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTFLMAERLRNLGKYTFADVAGYRFAPTAIRSFAASGTLVVVLFYLIAQMVGAGALIKLL HHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH FGLDYWVAVTLVGVLMMIYVLFGGMTATTWVQIIKAVLLLTGVTFMAVAIMWHFNFSFEA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LFAEGVRVKTAVAASGGASPEDAAKAGLSIMGPGGFVKDPISAISFGMALMFGTAGLPHI HHHCCCEEEEEEECCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHH LMRFFTVPDAKQARKSVLWATTWIGYFYILIFIIGFGAIALVLTNPQFADVATGTIHGGK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCHHHCCCCCCCCCC GAANMAAVLVGNAVGGNVFMGFISAVAFATILAVVAGLTLSGASAVSHDLYATVIKKGNP CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC APGSELKVSRATTLVLGVIAVLLGIVFEKQNVAFMVSLAFAIAASANFPVLILSLLWKNC CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCC TTRGAVTGGFLGLISSLVLTILSPSVWVDTLGNAAGSAPFPYTSPALFSMTIGFVGIWLF CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SVLDRSPQAANERAAFKAQQIRAETGLGASGASGH HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SKTSRLLLILAGLVPAGIALAAGGDLGQVDKQPTNWVAIAMFGFFVLATLWITKWAAAK CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC TKSAADFYTAGGGITGFQNGLAIAGDFMSAASFLGITAAVMANGYDGLIYAIGFLVGWPI CCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTFLMAERLRNLGKYTFADVAGYRFAPTAIRSFAASGTLVVVLFYLIAQMVGAGALIKLL HHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH FGLDYWVAVTLVGVLMMIYVLFGGMTATTWVQIIKAVLLLTGVTFMAVAIMWHFNFSFEA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LFAEGVRVKTAVAASGGASPEDAAKAGLSIMGPGGFVKDPISAISFGMALMFGTAGLPHI HHHCCCEEEEEEECCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHH LMRFFTVPDAKQARKSVLWATTWIGYFYILIFIIGFGAIALVLTNPQFADVATGTIHGGK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCHHHCCCCCCCCCC GAANMAAVLVGNAVGGNVFMGFISAVAFATILAVVAGLTLSGASAVSHDLYATVIKKGNP CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC APGSELKVSRATTLVLGVIAVLLGIVFEKQNVAFMVSLAFAIAASANFPVLILSLLWKNC CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCC TTRGAVTGGFLGLISSLVLTILSPSVWVDTLGNAAGSAPFPYTSPALFSMTIGFVGIWLF CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SVLDRSPQAANERAAFKAQQIRAETGLGASGASGH HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA