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The map label for this gene is yjcH [H]

Identifier: 78049829

GI number: 78049829

Start: 4906697

End: 4907014

Strand: Reverse

Name: yjcH [H]

Synonym: XCV4273

Alternate gene names: 78049829

Gene position: 4907014-4906697 (Counterclockwise)

Preceding gene: 78049830

Following gene: 78049828

Centisome position: 94.76

GC content: 58.49

Gene sequence:

>318_bases
ATGACCGTCTCGAATGACGCGTTGATCGCCAAGATCGATGCCAATCCGAAGTACCACGCACTCAAGCGTCAGCGCAACAC
GCTGGGCTGGACGCTCACCATACTGATGTTGCTGGCCTATTACGGCTACATCGGCCTGATTGCCTTCGACAAGGAATTCC
TCGCCAAGCCGATCGGTGCCGGCGTGACCTCGATCGGCATCCCGATCGCGATCGGAGTGATGGTGTTCACCATCGTCATC
ACCGCCATCTACGTGCGTCGCGCCAACAACACCTACGACCAGCTGACCGCGCAGATCCTGGAGGAAGCCCGCAAATGA

Upstream 100 bases:

>100_bases
AGTACAGCTTCTAGCGTTCTGCCACTGGCGGCCTGCTCCACTGCGGTGGAGCGGGCATCGCCGCCTTATGTCTTACCAGC
GCTCTACCAGGAGACAGACC

Downstream 100 bases:

>100_bases
GCAAGACTTCGCGCCTTCTCCTGATCCTGGCCGGCCTGGTGCCTGCCGGCATCGCGCTGGCCGCCGGCGGCGACCTGGGC
CAGGTCGACAAGCAGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTVSNDALIAKIDANPKYHALKRQRNTLGWTLTILMLLAYYGYIGLIAFDKEFLAKPIGAGVTSIGIPIAIGVMVFTIVI
TAIYVRRANNTYDQLTAQILEEARK

Sequences:

>Translated_105_residues
MTVSNDALIAKIDANPKYHALKRQRNTLGWTLTILMLLAYYGYIGLIAFDKEFLAKPIGAGVTSIGIPIAIGVMVFTIVI
TAIYVRRANNTYDQLTAQILEEARK
>Mature_104_residues
TVSNDALIAKIDANPKYHALKRQRNTLGWTLTILMLLAYYGYIGLIAFDKEFLAKPIGAGVTSIGIPIAIGVMVFTIVIT
AIYVRRANNTYDQLTAQILEEARK

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=101, Percent_Identity=35.6435643564356, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 11631; Mature: 11500

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSNDALIAKIDANPKYHALKRQRNTLGWTLTILMLLAYYGYIGLIAFDKEFLAKPIGA
CCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
GVTSIGIPIAIGVMVFTIVITAIYVRRANNTYDQLTAQILEEARK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVSNDALIAKIDANPKYHALKRQRNTLGWTLTILMLLAYYGYIGLIAFDKEFLAKPIGA
CCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
GVTSIGIPIAIGVMVFTIVITAIYVRRANNTYDQLTAQILEEARK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]