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The map label for this gene is hcr [C]

Identifier: 78049609

GI number: 78049609

Start: 4653488

End: 4654582

Strand: Reverse

Name: hcr [C]

Synonym: XCV4053

Alternate gene names: 78049609

Gene position: 4654582-4653488 (Counterclockwise)

Preceding gene: 78049611

Following gene: 78049608

Centisome position: 89.88

GC content: 68.77

Gene sequence:

>1095_bases
ATGCGTATAGTGCGACCCATGAACCTGGCATCTCCTCGCAAGTCCAAGTCCCCGCTGCCGGCACGCCTGGCGCGCCGACT
GGTGTCGCCGCAACTGTTCGATTTCTGGGCAACCCGGCTCAACCCGTTGTGGACGCTGGAACAGCCGATGGCGCGGCTGG
TCCAGCGCACCCCGGCCAGCCGGGACGCGGTGACCCTGGTGTTGCAGCCCAACGGCCACTGGCGCGGCCTGCAGGCCGGC
CAGCACGTGAGCTTGGGCGTGGAGATCGACGGCCGCCGCCTGTTGCGTAGCTACAGCCCCACGGTGCAGGCCGACGGCCG
GCTGGCGATCACCGTCAAGGCGATCGAGGGTGGGTTGGTGAGCCGCTTCCTGGCGCACGATGCGGCCTTGGGCACGGTGG
TCTCGCTGGCCCCGGCCTTCGGCGACATGCTGCTGCCGACCACGCCTACCCCGCTCGTGCTGCTGGCCGCCGGCTCCGGC
ATCACGCCGATGCGTGCGTTGCTGCAGGCCGCCGCGCAAGCCGGCATGCCGATGGACGTGGACCTGCTGTATTGGGTGCG
CCAGCGCGACGAAGCCTGCTTCGTCGACGAATTCGCCGCGCTGGCCGCGGCGCATCCGCGCCTGCGTGTGCAACTGCTGA
CCACCCGCGAAGGCGAGACTCCTGCAGAACGCGTGGACACCTATTCGTTGGACCACATTGCCGCGCTGGAGCAGCGCCAT
GTGATGGCCTGCGGGCCGGGTGGTTTTGTGCAGGCCGCGCGCGAACGGCTGCAGGGACGCGTGGCTGCATTTCAGGCCGA
AGCCTTCAGCGTGCCGGCACTGGACCAGGCCGAGACCGGCCAGGTGCAGGTCCAACTGTCACGCAGCGGCCGTACCCTGA
CCCTGCCGCGCGGCCAGTCGCTGCTGGAAGGGCTGGAAGCGCAAGGCCTGCGGCCCAAACATGGCTGCCGCATGGGCATC
TGCAACACCTGCGCCTGCCCGCGCCAATCCGGCACCACCCGGCACCTGCTCACCGGTGAACGCAGTAACGAACCCACCGC
ACAGGTGCGCCTGTGCATTAGTGCGCCAAGCACTGACCTGATCCTGGATCTGTAA

Upstream 100 bases:

>100_bases
TGGGAAGGCAGGGCGATAGAGGTCATGAGGCTGCAGCCGGGCGTGGGCCTGAATCATAGCCCCTCTGGCAATATACAAGT
GTATACACGGCTGTGCATGC

Downstream 100 bases:

>100_bases
GGAATCTTCATGAGCCGAGTCCATAACCGTGCCCTGTCCGCTGCCGAACTGCAGTCTTTCGGCGACGAACTCGATGCCAT
CCGCGCGCGCGTGCTGAGCC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRIVRPMNLASPRKSKSPLPARLARRLVSPQLFDFWATRLNPLWTLEQPMARLVQRTPASRDAVTLVLQPNGHWRGLQAG
QHVSLGVEIDGRRLLRSYSPTVQADGRLAITVKAIEGGLVSRFLAHDAALGTVVSLAPAFGDMLLPTTPTPLVLLAAGSG
ITPMRALLQAAAQAGMPMDVDLLYWVRQRDEACFVDEFAALAAAHPRLRVQLLTTREGETPAERVDTYSLDHIAALEQRH
VMACGPGGFVQAARERLQGRVAAFQAEAFSVPALDQAETGQVQVQLSRSGRTLTLPRGQSLLEGLEAQGLRPKHGCRMGI
CNTCACPRQSGTTRHLLTGERSNEPTAQVRLCISAPSTDLILDL

Sequences:

>Translated_364_residues
MRIVRPMNLASPRKSKSPLPARLARRLVSPQLFDFWATRLNPLWTLEQPMARLVQRTPASRDAVTLVLQPNGHWRGLQAG
QHVSLGVEIDGRRLLRSYSPTVQADGRLAITVKAIEGGLVSRFLAHDAALGTVVSLAPAFGDMLLPTTPTPLVLLAAGSG
ITPMRALLQAAAQAGMPMDVDLLYWVRQRDEACFVDEFAALAAAHPRLRVQLLTTREGETPAERVDTYSLDHIAALEQRH
VMACGPGGFVQAARERLQGRVAAFQAEAFSVPALDQAETGQVQVQLSRSGRTLTLPRGQSLLEGLEAQGLRPKHGCRMGI
CNTCACPRQSGTTRHLLTGERSNEPTAQVRLCISAPSTDLILDL
>Mature_364_residues
MRIVRPMNLASPRKSKSPLPARLARRLVSPQLFDFWATRLNPLWTLEQPMARLVQRTPASRDAVTLVLQPNGHWRGLQAG
QHVSLGVEIDGRRLLRSYSPTVQADGRLAITVKAIEGGLVSRFLAHDAALGTVVSLAPAFGDMLLPTTPTPLVLLAAGSG
ITPMRALLQAAAQAGMPMDVDLLYWVRQRDEACFVDEFAALAAAHPRLRVQLLTTREGETPAERVDTYSLDHIAALEQRH
VMACGPGGFVQAARERLQGRVAAFQAEAFSVPALDQAETGQVQVQLSRSGRTLTLPRGQSLLEGLEAQGLRPKHGCRMGI
CNTCACPRQSGTTRHLLTGERSNEPTAQVRLCISAPSTDLILDL

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787098, Length=317, Percent_Identity=27.7602523659306, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1788903, Length=220, Percent_Identity=30.4545454545455, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787658, Length=295, Percent_Identity=28.4745762711864, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39512; Mature: 39512

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVRPMNLASPRKSKSPLPARLARRLVSPQLFDFWATRLNPLWTLEQPMARLVQRTPAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCC
RDAVTLVLQPNGHWRGLQAGQHVSLGVEIDGRRLLRSYSPTVQADGRLAITVKAIEGGLV
CCEEEEEECCCCCCCCCCCCCEEEEEEEECHHHHHHHCCCCEECCCEEEEEEEECCCHHH
SRFLAHDAALGTVVSLAPAFGDMLLPTTPTPLVLLAAGSGITPMRALLQAAAQAGMPMDV
HHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCH
DLLYWVRQRDEACFVDEFAALAAAHPRLRVQLLTTREGETPAERVDTYSLDHIAALEQRH
HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHCE
VMACGPGGFVQAARERLQGRVAAFQAEAFSVPALDQAETGQVQVQLSRSGRTLTLPRGQS
EEEECCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCEEEEEEECCCCEEECCCCHH
LLEGLEAQGLRPKHGCRMGICNTCACPRQSGTTRHLLTGERSNEPTAQVRLCISAPSTDL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCE
ILDL
EEEC
>Mature Secondary Structure
MRIVRPMNLASPRKSKSPLPARLARRLVSPQLFDFWATRLNPLWTLEQPMARLVQRTPAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCC
RDAVTLVLQPNGHWRGLQAGQHVSLGVEIDGRRLLRSYSPTVQADGRLAITVKAIEGGLV
CCEEEEEECCCCCCCCCCCCCEEEEEEEECHHHHHHHCCCCEECCCEEEEEEEECCCHHH
SRFLAHDAALGTVVSLAPAFGDMLLPTTPTPLVLLAAGSGITPMRALLQAAAQAGMPMDV
HHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCH
DLLYWVRQRDEACFVDEFAALAAAHPRLRVQLLTTREGETPAERVDTYSLDHIAALEQRH
HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCHHHHHHHHHCE
VMACGPGGFVQAARERLQGRVAAFQAEAFSVPALDQAETGQVQVQLSRSGRTLTLPRGQS
EEEECCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCEEEEEEECCCCEEECCCCHH
LLEGLEAQGLRPKHGCRMGICNTCACPRQSGTTRHLLTGERSNEPTAQVRLCISAPSTDL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCE
ILDL
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]