| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049611
Identifier: 78049611
GI number: 78049611
Start: 4655512
End: 4655850
Strand: Reverse
Name: 78049611
Synonym: XCV4055
Alternate gene names: NA
Gene position: 4655850-4655512 (Counterclockwise)
Preceding gene: 78049616
Following gene: 78049609
Centisome position: 89.91
GC content: 64.01
Gene sequence:
>339_bases TTGCGTGGGATGGTCGACACAAGCGATGCCACGATTTCGAAATTCAGGACCAGGCGAGCCGACGCTGCGCGCGGCGAGCA ATCGACATGCAATTCAAGCGGCGCGCTGTTGGCCGGTGCAGCCCGCGCCCCATGTCCACGCGGACACTGGACGCGCTCAC GCGGCCTGCAGCCTTGTGGATTTGTAGGCCATGTAAGCCTTCGCCTGCAGCGCTTCCATCGCTTCGAGAGAATGGGGCGG CAGCTAGAGTTTTTGCCCAGATGCCGCATGCGTCGCATTGGGCGAGGCATCGCTCGTCGCGCATCGGTGCCGCGGGCCGT TTCGCCTCTGTGCCGATGA
Upstream 100 bases:
>100_bases AAGCACTTTATGCAATTATGTTCTGGATTATCTCTCTGGCGGTCGGAGTCGGTCGTCGGAAACAGAATCAAAATCGCGTC GCGGCAGCAGGCGAGAGCCA
Downstream 100 bases:
>100_bases CAGAGGGACGACACGTCACCGCGCGTTGTGTGCGCCCGCATGTCGCCAGTCACGCAGAATGGCCTGAAGTGTCGGATCAG AGTGGCTCGCAAGAGCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MRGMVDTSDATISKFRTRRADAARGEQSTCNSSGALLAGAARAPCPRGHWTRSRGLQPCGFVGHVSLRLQRFHRFERMGR QLEFLPRCRMRRIGRGIARRASVPRAVSPLCR
Sequences:
>Translated_112_residues MRGMVDTSDATISKFRTRRADAARGEQSTCNSSGALLAGAARAPCPRGHWTRSRGLQPCGFVGHVSLRLQRFHRFERMGR QLEFLPRCRMRRIGRGIARRASVPRAVSPLCR >Mature_112_residues MRGMVDTSDATISKFRTRRADAARGEQSTCNSSGALLAGAARAPCPRGHWTRSRGLQPCGFVGHVSLRLQRFHRFERMGR QLEFLPRCRMRRIGRGIARRASVPRAVSPLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12565; Mature: 12565
Theoretical pI: Translated: 12.46; Mature: 12.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGMVDTSDATISKFRTRRADAARGEQSTCNSSGALLAGAARAPCPRGHWTRSRGLQPCG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCC FVGHVSLRLQRFHRFERMGRQLEFLPRCRMRRIGRGIARRASVPRAVSPLCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MRGMVDTSDATISKFRTRRADAARGEQSTCNSSGALLAGAARAPCPRGHWTRSRGLQPCG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCC FVGHVSLRLQRFHRFERMGRQLEFLPRCRMRRIGRGIARRASVPRAVSPLCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA