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The map label for this gene is yiaA [H]

Identifier: 78049542

GI number: 78049542

Start: 4574596

End: 4575030

Strand: Reverse

Name: yiaA [H]

Synonym: XCV3986

Alternate gene names: 78049542

Gene position: 4575030-4574596 (Counterclockwise)

Preceding gene: 78049544

Following gene: 78049534

Centisome position: 88.35

GC content: 56.78

Gene sequence:

>435_bases
ATGGCCACGCAAAAAACCTCGCCTGCTTTTATCGCTGCATCCTGGGCCGCCTTGTTGCTAGGCGGTGCGGCATATCTGAT
CGGGTTGTGGAATGCCGAGATGTTGCTCAACGAAAAGGGTTACTACTTCACGCTGCTACTGTTCGGTTTGTTCGCATCGG
TGTCGCTGCAGAAGAGCGTGCGTGACCGTGCCGATGGGATTCCGGTCACTGGCTTGTACTACGCCATTTGCTGGTTTTCG
CTAATCGCCGCATTGGTGCTGCTGACCATCGGCTTGATCAATGCCACGCTGCTGCTGAGCGAAAAGGGCTTTTACGCAAT
GGCGTATGCGTTGAGCCTGTTCGGTGCGGTTGCCGTGCAGAAGAACACCCGCGATGCGATGGAGATCAATGACGCACCGC
GCAATCCGCGTAGCGTGCCGCCAGCACTCGACTGA

Upstream 100 bases:

>100_bases
CGTCGCCGGGGTCGCCCTTGTTGCAGATCACTGTCTACAAGACGTCCGCGTCTCACATCGTTATATGTCATGCATCGTTT
CACCATGAAAAGGAGTTTCC

Downstream 100 bases:

>100_bases
TCCATTGCAGATCGTACGATGCGACAACGCCACCTTGACGGTGGCGTTGTCGTTTTAGCGCTTGTGTGCATCGTCGCCGG
TGACGAAATTGGCTGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MATQKTSPAFIAASWAALLLGGAAYLIGLWNAEMLLNEKGYYFTLLLFGLFASVSLQKSVRDRADGIPVTGLYYAICWFS
LIAALVLLTIGLINATLLLSEKGFYAMAYALSLFGAVAVQKNTRDAMEINDAPRNPRSVPPALD

Sequences:

>Translated_144_residues
MATQKTSPAFIAASWAALLLGGAAYLIGLWNAEMLLNEKGYYFTLLLFGLFASVSLQKSVRDRADGIPVTGLYYAICWFS
LIAALVLLTIGLINATLLLSEKGFYAMAYALSLFGAVAVQKNTRDAMEINDAPRNPRSVPPALD
>Mature_143_residues
ATQKTSPAFIAASWAALLLGGAAYLIGLWNAEMLLNEKGYYFTLLLFGLFASVSLQKSVRDRADGIPVTGLYYAICWFSL
IAALVLLTIGLINATLLLSEKGFYAMAYALSLFGAVAVQKNTRDAMEINDAPRNPRSVPPALD

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082292, Length=120, Percent_Identity=63.3333333333333, Blast_Score=154, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 15554; Mature: 15423

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQKTSPAFIAASWAALLLGGAAYLIGLWNAEMLLNEKGYYFTLLLFGLFASVSLQKSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHH
RDRADGIPVTGLYYAICWFSLIAALVLLTIGLINATLLLSEKGFYAMAYALSLFGAVAVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
KNTRDAMEINDAPRNPRSVPPALD
CCCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATQKTSPAFIAASWAALLLGGAAYLIGLWNAEMLLNEKGYYFTLLLFGLFASVSLQKSV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHH
RDRADGIPVTGLYYAICWFSLIAALVLLTIGLINATLLLSEKGFYAMAYALSLFGAVAVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
KNTRDAMEINDAPRNPRSVPPALD
CCCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]