| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is bglX [H]
Identifier: 78049544
GI number: 78049544
Start: 4576561
End: 4578732
Strand: Reverse
Name: bglX [H]
Synonym: XCV3988
Alternate gene names: 78049544
Gene position: 4578732-4576561 (Counterclockwise)
Preceding gene: 78049545
Following gene: 78049542
Centisome position: 88.42
GC content: 66.21
Gene sequence:
>2172_bases ATGGCTGCTGATCGCATCGAAACCCTGATTGCCCGGATGACCGTCGAAGAGAAGGTCGGACAGTTGGGTGTGTTCGCCGA CATGGTGCGGCCGTTCGCGCCGGACGTGAATCCCGAGGCCAACGTGCTCAATGCCGACGAGGTGCTGCAGCAGGTGCGCC TGGGTCGGGTCGGCTCGCTGTTCAACGGGGTGGGCGCCGCGCTGGGCGTGCAGATCCAGAAAGTCGCGGTGGAAGAGAGT CGCCTGGGGATCCCGGTGATCCTGGCCGCCGACGTGATCCACGGCATGCGCACGGTGTTCCCGATCCCGCTGGGCGAGGC GGCCAGTTTCGAGCCGGCGTTGGCCGAGCGCACCGCGCGCGCCACCGCGATCGAGGCCACCGCTGCCGGCCTGCACTGGA CCTACGCGCCGGCCGTGGACATCGCCCGCGACCAGCGCTGGGGCCGTGGTGCCGAGGGTGCCGGCGAAGACGTGATGCTG GGCGCCGCCTTTGCCGCTGCCCGTGTGCGCGGGTTCCAGGGCAGCGACCTGACCGCCCACGATTGCCTGTTGGCCACGCC CAAGCATTTCGCCGCCTATGGCGCAGTGGCGGCGGGCATGGAATACAACACCGTCGACATCGCGCCGCAGACGCTGCGCG ATGTGCACTTGCCGCCGTTCAAGGCCGCTTTCGAGGCCGGCGCGTTGACCGTGATGTCGTCCTTCAACGACATCAACGGC GTGCCGGCCAGCGCCAACCACGAGTTGCTGACCGAGATCCTGCGCGGGGAATGGCAATTCCCCGGCGTGGTGATTTCCGA TTACACCGCCGACATGGAATTGATCGCCCATGGCTACGCCGCCGATGAGCGCGACGCGACCAAGAAGGCCTTCCTGGCCG GCCTGGACCTGAGCATGCAGAGCGGCTTTTATGCCGCGCATCTGCCTGCGCTGGTGGAAAGCGGCGAGGTGCCGATGGCC ACGTTGGATGCCAGCGTGCGGCGCATCCTGCAGCTGAAGGACGCGATCGGGCTGTTCGACAATCCGTATCGCTCGCTGGA CCCGGCGCGCGAAGCCGACACCACGCACCTGCCGGCGCACGATGCGCTGTCGCGCGATGCGGCGCGGCGTTCGATCGTGC TGTTGAAAAACGAAGGCGGCGTGTTGCCGCTGAAGAAGAGCGGCCAGCGCATCGCGTTGATCGGCCCGTTCGTGCAGGAC CGCGAGAACATCGAGGGCTGCTGGACCTTGTTCGGCGACAAGGAACGCTACGTGACCCTGGAGCAGGGCGTGCGTGCGGT GGTCGGCACTGAAGATCTGAGCGTGGTGGCCGGTTGCGGACTGGAAGAGGCGCTGCCGGGTGGCATTTCCGCTGCGATCG ATGCAGCGCAGGCGGCCGATGTGGTGGTGCTGGCGTTGGGCGAGCCGCAGCGTTTCAGTGGCGAGGCACAATCGCGCACC GAAATCACCTTGCCGCCGGCGCAACAGGCACTGGCCGAAGCGATTGCAGCGACCGGTACCCCGATGGTGGTGTTGTTGCG CAATGGCCGCGCGCTGGCCTTGAGTGGTGCGGTGCGCGATGCCGATGCGATTGCCGTGACCTGGTATCTGGGCACGCAAA CCGGGACCGGCGTGGCCGATGTGCTGTTCGGCGACTACAACCCGTCGGCGCGTCTGCCGATCAGCTTCCCGCAGGTGACC GGGCAACAGCCGTATTTCTATAACCATCTGCGCACCGGACGCCCAGAATTGCCGGCCCTGTCCGAGTACAAGGCGCGTTG GCGCGAGATGCCAAACGAACCGTTGTATCCGTTCGGACATGGATTGAGCTACACCACCTTTGCGTATGCGCAGCCGCAGT TGAGCGCGGCGCAACTCGGCTGGGATGAGACACTGACCATTACCACGCGCGTCACCAACACCGGCAAGGTCGCCGGCGAG GAAGTGGTGCAGTTGTATGTGCACGATCGCGTGGCCAGCCGCGTGCGCCCGGTGCGCGAACTCAAGGGATTTCGCAAGGT GTTGCTGCAGCCCGGCGAGAGCCAGGAGGTGGTGTTCACACTGGAGCGCGACGCGCTGGCATTCACCAACCACAAGGGCA TCTTCGGTGCGGAGCCGGGTCTGTTCGATCTATGGGTGTGCGCGTCGGCCAAGAGCGGCGAGGCCGTCAGCTTCGAGCTG CTGGAACGCTGA
Upstream 100 bases:
>100_bases TACAAATCACCAAATCCCACTCCCGGCCCTCGAAACTTGCCTGCGCGCAGGTGCGTCAGGCTAGAATTGACGGCCATGTA AACGTTTTCTCAAGGATCTC
Downstream 100 bases:
>100_bases TAGCGGCGCGCTTGGCACCGACAGCCAGCGGCTATCGTGCGAACGGATGACCACGGCTACAACACGAAGCCCGCTGATGC GGTGCTCAGACGCGATGACG
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MAADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVLQQVRLGRVGSLFNGVGAALGVQIQKVAVEES RLGIPVILAADVIHGMRTVFPIPLGEAASFEPALAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVML GAAFAAARVRGFQGSDLTAHDCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFEAGALTVMSSFNDING VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPALVESGEVPMA TLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTHLPAHDALSRDAARRSIVLLKNEGGVLPLKKSGQRIALIGPFVQD RENIEGCWTLFGDKERYVTLEQGVRAVVGTEDLSVVAGCGLEEALPGGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT EITLPPAQQALAEAIAATGTPMVVLLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVADVLFGDYNPSARLPISFPQVT GQQPYFYNHLRTGRPELPALSEYKARWREMPNEPLYPFGHGLSYTTFAYAQPQLSAAQLGWDETLTITTRVTNTGKVAGE EVVQLYVHDRVASRVRPVRELKGFRKVLLQPGESQEVVFTLERDALAFTNHKGIFGAEPGLFDLWVCASAKSGEAVSFEL LER
Sequences:
>Translated_723_residues MAADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVLQQVRLGRVGSLFNGVGAALGVQIQKVAVEES RLGIPVILAADVIHGMRTVFPIPLGEAASFEPALAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVML GAAFAAARVRGFQGSDLTAHDCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFEAGALTVMSSFNDING VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPALVESGEVPMA TLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTHLPAHDALSRDAARRSIVLLKNEGGVLPLKKSGQRIALIGPFVQD RENIEGCWTLFGDKERYVTLEQGVRAVVGTEDLSVVAGCGLEEALPGGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT EITLPPAQQALAEAIAATGTPMVVLLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVADVLFGDYNPSARLPISFPQVT GQQPYFYNHLRTGRPELPALSEYKARWREMPNEPLYPFGHGLSYTTFAYAQPQLSAAQLGWDETLTITTRVTNTGKVAGE EVVQLYVHDRVASRVRPVRELKGFRKVLLQPGESQEVVFTLERDALAFTNHKGIFGAEPGLFDLWVCASAKSGEAVSFEL LER >Mature_722_residues AADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVLQQVRLGRVGSLFNGVGAALGVQIQKVAVEESR LGIPVILAADVIHGMRTVFPIPLGEAASFEPALAERTARATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVMLG AAFAAARVRGFQGSDLTAHDCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFEAGALTVMSSFNDINGV PASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQSGFYAAHLPALVESGEVPMAT LDASVRRILQLKDAIGLFDNPYRSLDPAREADTTHLPAHDALSRDAARRSIVLLKNEGGVLPLKKSGQRIALIGPFVQDR ENIEGCWTLFGDKERYVTLEQGVRAVVGTEDLSVVAGCGLEEALPGGISAAIDAAQAADVVVLALGEPQRFSGEAQSRTE ITLPPAQQALAEAIAATGTPMVVLLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVADVLFGDYNPSARLPISFPQVTG QQPYFYNHLRTGRPELPALSEYKARWREMPNEPLYPFGHGLSYTTFAYAQPQLSAAQLGWDETLTITTRVTNTGKVAGEE VVQLYVHDRVASRVRPVRELKGFRKVLLQPGESQEVVFTLERDALAFTNHKGIFGAEPGLFDLWVCASAKSGEAVSFELL ER
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=745, Percent_Identity=42.2818791946309, Blast_Score=573, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 77585; Mature: 77454
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVLQQVRLGRVGSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHH FNGVGAALGVQIQKVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPALAERTAR HHHHHHHHCCEEEEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVMLGAAFAAARVRGFQGSDLTAH HHEEEHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCC DCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFEAGALTVMSSFNDING CEEEECCHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCCHHHHHHCCHHHEECCCCCCCC VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQ CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHC SGFYAAHLPALVESGEVPMATLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTHLPAH CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCH DALSRDAARRSIVLLKNEGGVLPLKKSGQRIALIGPFVQDRENIEGCWTLFGDKERYVTL HHHHHHHHHCEEEEEECCCCEEEECCCCCEEEEECCCHHCCCCCCEEEEEECCCCCEEEH EQGVRAVVGTEDLSVVAGCGLEEALPGGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT HHCCEEEECCCCCHHEECCCHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCE EITLPPAQQALAEAIAATGTPMVVLLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVAD EEECCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCCCCEE VLFGDYNPSARLPISFPQVTGQQPYFYNHLRTGRPELPALSEYKARWREMPNEPLYPFGH EEECCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC GLSYTTFAYAQPQLSAAQLGWDETLTITTRVTNTGKVAGEEVVQLYVHDRVASRVRPVRE CCCEEEEEECCCCCCHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH LKGFRKVLLQPGESQEVVFTLERDALAFTNHKGIFGAEPGLFDLWVCASAKSGEAVSFEL HHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEHHH LER HCC >Mature Secondary Structure AADRIETLIARMTVEEKVGQLGVFADMVRPFAPDVNPEANVLNADEVLQQVRLGRVGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHH FNGVGAALGVQIQKVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPALAERTAR HHHHHHHHCCEEEEEEHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH ATAIEATAAGLHWTYAPAVDIARDQRWGRGAEGAGEDVMLGAAFAAARVRGFQGSDLTAH HHEEEHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCC DCLLATPKHFAAYGAVAAGMEYNTVDIAPQTLRDVHLPPFKAAFEAGALTVMSSFNDING CEEEECCHHHHHHHHHHCCCCCCEEECCHHHHHHCCCCCHHHHHHCCHHHEECCCCCCCC VPASANHELLTEILRGEWQFPGVVISDYTADMELIAHGYAADERDATKKAFLAGLDLSMQ CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCHHC SGFYAAHLPALVESGEVPMATLDASVRRILQLKDAIGLFDNPYRSLDPAREADTTHLPAH CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCH DALSRDAARRSIVLLKNEGGVLPLKKSGQRIALIGPFVQDRENIEGCWTLFGDKERYVTL HHHHHHHHHCEEEEEECCCCEEEECCCCCEEEEECCCHHCCCCCCEEEEEECCCCCEEEH EQGVRAVVGTEDLSVVAGCGLEEALPGGISAAIDAAQAADVVVLALGEPQRFSGEAQSRT HHCCEEEECCCCCHHEECCCHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCE EITLPPAQQALAEAIAATGTPMVVLLRNGRALALSGAVRDADAIAVTWYLGTQTGTGVAD EEECCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCCCCEE VLFGDYNPSARLPISFPQVTGQQPYFYNHLRTGRPELPALSEYKARWREMPNEPLYPFGH EEECCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC GLSYTTFAYAQPQLSAAQLGWDETLTITTRVTNTGKVAGEEVVQLYVHDRVASRVRPVRE CCCEEEEEECCCCCCHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH LKGFRKVLLQPGESQEVVFTLERDALAFTNHKGIFGAEPGLFDLWVCASAKSGEAVSFEL HHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEHHH LER HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]