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The map label for this gene is wxcJ [H]

Identifier: 78049257

GI number: 78049257

Start: 4276206

End: 4276838

Strand: Reverse

Name: wxcJ [H]

Synonym: XCV3701

Alternate gene names: 78049257

Gene position: 4276838-4276206 (Counterclockwise)

Preceding gene: 78049258

Following gene: 78049255

Centisome position: 82.59

GC content: 61.3

Gene sequence:

>633_bases
ATGGCCTGGACCAGAGACCAGATGGCCGCACGCGCGGCACGCGAACTGACCGATGGTGCCTACGTCAACCTGGGCATCGG
CCTGCCGACGCTGGTCGCCAACCACATCCCCGACGGTGTGGATGTGTGGCTGCAGTCGGAGAACGGCCTGCTTGGCATCG
GCCCGTTTCCAAGCGAAGACCAAGTGGATGCAGACCTGATCAATGCAGGCAAGCAGACCGTGACCGCCCGCGCCGGTGCC
AGCTATTTCGGTAGCCACGATTCATTCGCGATGATCCGTGGCGGCCACATCGACCTGGCGATTCTCGGCGCAATGCAGGT
CACCGACCGTGGCGATCTGGCCAACTGGATGGTGCCCGGCAAGATGGTCAAGGGCATGGGCGGTGCAATGGATCTGGTGG
CCGGCGTCAAACGCGTGGTGGTGTTGATGGAGCACGTCGCCAAGGACGGAAGCCACAAGATCTTGCGCGAATGCGACCTG
CCACTGACCGGCGTCGGCGTGGTGGACCGCATCATTACCGATCTAGCGGTGTTCGATGTCACTGCAGATGGATTGGTGCT
GGTTGAACACGCCGATGGAGTGGAGCTGGAGGAACTGCGCAAAAAAACAGGCGTTGCATTCATTGCCGCATAA

Upstream 100 bases:

>100_bases
ATCAGGTGCATCTGCCCGGCATTTACGTGGACCGCCTGGTGCTCAACGCCACGCCGGAAAAACGCATCGAACAGCGCACC
GTGCGCGAAGGACAGCAGTG

Downstream 100 bases:

>100_bases
ATAAGCAGGGGCCTGTCAGGCCCCTGGCTTTTAGAGATTCTGGTAGTTCGGACCAGAACCACCCTCCGGCGTGACCCAGG
TGATGATTTCGTACGGGTCC

Product: 3-oxoacid CoA transferase beta subunit

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MAWTRDQMAARAARELTDGAYVNLGIGLPTLVANHIPDGVDVWLQSENGLLGIGPFPSEDQVDADLINAGKQTVTARAGA
SYFGSHDSFAMIRGGHIDLAILGAMQVTDRGDLANWMVPGKMVKGMGGAMDLVAGVKRVVVLMEHVAKDGSHKILRECDL
PLTGVGVVDRIITDLAVFDVTADGLVLVEHADGVELEELRKKTGVAFIAA

Sequences:

>Translated_210_residues
MAWTRDQMAARAARELTDGAYVNLGIGLPTLVANHIPDGVDVWLQSENGLLGIGPFPSEDQVDADLINAGKQTVTARAGA
SYFGSHDSFAMIRGGHIDLAILGAMQVTDRGDLANWMVPGKMVKGMGGAMDLVAGVKRVVVLMEHVAKDGSHKILRECDL
PLTGVGVVDRIITDLAVFDVTADGLVLVEHADGVELEELRKKTGVAFIAA
>Mature_209_residues
AWTRDQMAARAARELTDGAYVNLGIGLPTLVANHIPDGVDVWLQSENGLLGIGPFPSEDQVDADLINAGKQTVTARAGAS
YFGSHDSFAMIRGGHIDLAILGAMQVTDRGDLANWMVPGKMVKGMGGAMDLVAGVKRVVVLMEHVAKDGSHKILRECDLP
LTGVGVVDRIITDLAVFDVTADGLVLVEHADGVELEELRKKTGVAFIAA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=205, Percent_Identity=59.5121951219512, Blast_Score=248, Evalue=2e-66,
Organism=Homo sapiens, GI11545841, Length=205, Percent_Identity=60, Blast_Score=244, Evalue=4e-65,
Organism=Escherichia coli, GI1788552, Length=203, Percent_Identity=53.2019704433498, Blast_Score=213, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17531517, Length=206, Percent_Identity=58.7378640776699, Blast_Score=251, Evalue=2e-67,
Organism=Drosophila melanogaster, GI21358325, Length=205, Percent_Identity=60.9756097560976, Blast_Score=257, Evalue=4e-69,
Organism=Drosophila melanogaster, GI24655794, Length=205, Percent_Identity=60.9756097560976, Blast_Score=257, Evalue=5e-69,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22213; Mature: 22082

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS01274 COA_TRANSF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWTRDQMAARAARELTDGAYVNLGIGLPTLVANHIPDGVDVWLQSENGLLGIGPFPSED
CCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCC
QVDADLINAGKQTVTARAGASYFGSHDSFAMIRGGHIDLAILGAMQVTDRGDLANWMVPG
CCCHHHHHCCCCEEEECCCCHHCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCHHCCCH
KMVKGMGGAMDLVAGVKRVVVLMEHVAKDGSHKILRECDLPLTGVGVVDRIITDLAVFDV
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHEEE
TADGLVLVEHADGVELEELRKKTGVAFIAA
CCCCEEEEECCCCCCHHHHHHHCCEEEEEC
>Mature Secondary Structure 
AWTRDQMAARAARELTDGAYVNLGIGLPTLVANHIPDGVDVWLQSENGLLGIGPFPSED
CCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCC
QVDADLINAGKQTVTARAGASYFGSHDSFAMIRGGHIDLAILGAMQVTDRGDLANWMVPG
CCCHHHHHCCCCEEEECCCCHHCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCHHCCCH
KMVKGMGGAMDLVAGVKRVVVLMEHVAKDGSHKILRECDLPLTGVGVVDRIITDLAVFDV
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHEEE
TADGLVLVEHADGVELEELRKKTGVAFIAA
CCCCEEEEECCCCCCHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]