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The map label for this gene is rsgA [H]

Identifier: 78049177

GI number: 78049177

Start: 4166693

End: 4167784

Strand: Reverse

Name: rsgA [H]

Synonym: XCV3621

Alternate gene names: 78049177

Gene position: 4167784-4166693 (Counterclockwise)

Preceding gene: 78049181

Following gene: 78049176

Centisome position: 80.48

GC content: 67.67

Gene sequence:

>1092_bases
ATGAGCGACACACCCCCCGACTACCCCACCCTCCAATCCATCGGCTGGCCCTGGCCGGGGCCGCCTGAAGAGGCGGCCTG
GCAGGCGATCTTCGCTGCGCATCCGCAGGCATTGCCGGCGCGGGTGGTGGAGCAGCATCGCACCGGCTATGTGGCGGCCG
ATACGCCTCAGGCCAGCGTCAAGGCCGAGTCGTTGCCGGAGTGGCAGCGGCCGCGCTTTCCCAGCCATGAGCGGGCGGCG
GTGGGCGATTGGGTGTTGATGGAGGGCAAGCGCATCGTGGCGCTGCTGCCGCGACGCACCTCGATCAAGCGGGGGGCGGC
CGGCGAGCATTACCACCAGCAGGTGATCGCGGCCAATATCGATACGGTGTTCATCGTGTGCGGGCTGGATGCGGACTTCA
ATCCACGCCGCATCGAGCGCTATCTGTTGCTGGTGGGCGGCGGCGGTGCGCAGCCGGTGGTAGTGCTGACCAAGGCCGAT
CAGACCGAATACGCCGAGGATGCGTTGGCGGTGCTGGAAGAGCTGGAGGCGCAGAACATTCCGTTACGCGCGGTCAATGC
CAAGGATCCGGACAGCGTGGCCGCGTTGCGGCCGTGGCTGGGCGATGGCCGCACGGCGGTGCTGGTGGGCTCGTCCGGTG
CGGGTAAATCGACCCTGACCAATACGCTGCTCGGCACGCAGAAGATGAAGACCAATGCGGTGCGCGAGAACGATTCGCGC
GGCCGCCACACCACCACGCATCGTGCGTTGATTCCATTGCCGTCCGGGGCGTGCCTGATCGACACGCCTGGTATGCGCGA
GCTCAAGCCGACCGGCGAAGAGGATCTGGCCGAAGGCGGTTTTTCGGACGTGGAGGCCCTGGCGGCGCAGTGCCGCTTCA
ACGATTGCGCGCATATCGCCGAGCCGGGCTGTGCGGTGCGTGCGGCGATCGACGCAGGCGAGCTGGACCCGGAGCGTGTT
GCCAACTACATGAAGCTGCGGGTGGAAGTGGCCAGCGCCGCCGAAAAGCTCGCCACCCGCGTTGCGCAGAACAATCGCGG
CAAGGGGTCGGGCAAGCGGCCGGCCAGCGTCGATCGTCCCGGGCGGCGCTGA

Upstream 100 bases:

>100_bases
GCGGACATGCTTGCATCGGCAACGATGTCAAGCGGCGCGTCAGGCACGGTGCAGCACGCGCTTGCACAAGCCGCTGCGGC
CAGCCAGCTAGAATCGCCCC

Downstream 100 bases:

>100_bases
TGCCCTCGCGCAAGGGGCCGCCGGACATCGTCCATCACGCGGCGCTGGATGCGCGCCTGGTCAAGGCCGTGCGCGGTGTG
CGCCTGCTGGCCCTGGCCAG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSDTPPDYPTLQSIGWPWPGPPEEAAWQAIFAAHPQALPARVVEQHRTGYVAADTPQASVKAESLPEWQRPRFPSHERAA
VGDWVLMEGKRIVALLPRRTSIKRGAAGEHYHQQVIAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKAD
QTEYAEDALAVLEELEAQNIPLRAVNAKDPDSVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSR
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIAEPGCAVRAAIDAGELDPERV
ANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASVDRPGRR

Sequences:

>Translated_363_residues
MSDTPPDYPTLQSIGWPWPGPPEEAAWQAIFAAHPQALPARVVEQHRTGYVAADTPQASVKAESLPEWQRPRFPSHERAA
VGDWVLMEGKRIVALLPRRTSIKRGAAGEHYHQQVIAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKAD
QTEYAEDALAVLEELEAQNIPLRAVNAKDPDSVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSR
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIAEPGCAVRAAIDAGELDPERV
ANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASVDRPGRR
>Mature_362_residues
SDTPPDYPTLQSIGWPWPGPPEEAAWQAIFAAHPQALPARVVEQHRTGYVAADTPQASVKAESLPEWQRPRFPSHERAAV
GDWVLMEGKRIVALLPRRTSIKRGAAGEHYHQQVIAANIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQ
TEYAEDALAVLEELEAQNIPLRAVNAKDPDSVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRG
RHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIAEPGCAVRAAIDAGELDPERVA
NYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASVDRPGRR

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=220, Percent_Identity=35.4545454545455, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39114; Mature: 38982

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPPDYPTLQSIGWPWPGPPEEAAWQAIFAAHPQALPARVVEQHRTGYVAADTPQASV
CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCC
KAESLPEWQRPRFPSHERAAVGDWVLMEGKRIVALLPRRTSIKRGAAGEHYHQQVIAANI
CHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC
DTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEYAEDALAVLEELEAQNI
CEEEEEEECCCCCCHHEEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC
PLRAVNAKDPDSVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSR
CEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIA
CCCCCCCEEEEECCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHC
EPGCAVRAAIDAGELDPERVANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASVDRP
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GRR
CCC
>Mature Secondary Structure 
SDTPPDYPTLQSIGWPWPGPPEEAAWQAIFAAHPQALPARVVEQHRTGYVAADTPQASV
CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCC
KAESLPEWQRPRFPSHERAAVGDWVLMEGKRIVALLPRRTSIKRGAAGEHYHQQVIAANI
CHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC
DTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEYAEDALAVLEELEAQNI
CEEEEEEECCCCCCHHEEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC
PLRAVNAKDPDSVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSR
CEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHIA
CCCCCCCEEEEECCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHC
EPGCAVRAAIDAGELDPERVANYMKLRVEVASAAEKLATRVAQNNRGKGSGKRPASVDRP
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GRR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]