| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049176
Identifier: 78049176
GI number: 78049176
Start: 4165431
End: 4166693
Strand: Reverse
Name: 78049176
Synonym: XCV3620
Alternate gene names: NA
Gene position: 4166693-4165431 (Counterclockwise)
Preceding gene: 78049177
Following gene: 78049175
Centisome position: 80.46
GC content: 66.03
Gene sequence:
>1263_bases ATGCCCTCGCGCAAGGGGCCGCCGGACATCGTCCATCACGCGGCGCTGGATGCGCGCCTGGTCAAGGCCGTGCGCGGTGT GCGCCTGCTGGCCCTGGCCAGCTGGCCGCGCTCGCTGCAGGAGCCGTTTCTCAACAGCGTGGCGCGCGGGCAGCCGGAAT TGCCGCAGGTCGAGTATCCATCGCTGGATTTCGGCGACACCCGGCGCGAACTGGCCGCCATCGCCAAGGACGCCGACCCG CATCATCCGCTGGGTGAATACCTCATCGATTCGGCGCATAGCTGGAGTCTTGCAGCAGGTTTGCTGGAGTCGTTGGGCAC CCCGGCGGTGAGCGAATACTCGGCGCAATTGTTCGGCGTGCCGGAGGACCCGATGCCGGGCAACGGGCCGAGCACACGCG AAGCGGCGCAGCATTTCATCCAGATCGCGCGGGAGCTGGATCGCGAACTGATGGCGCCGGAAGAGCAGGTGCCGGTCTCG GCCACCGCCTTGCGCATGCAGTTGCAGAACGATCTGGACGGGTTTTTCGAGGGGCGCGTCATCACTGTCACGCTCGATCC GGATCTGCTCGCCAAGGCGGCGGCCGGCGCGCATCGCATCCGCTTGCGCACCGGTGCCACGTTCAGCGATTACGACCGCG CGCAGCTGTTCCATCACGAAGCGCTGGTGCATTCGCTGACCGCGCTCAACGGGCGCGCGCAGGTGCATCTGCCCAGCCTG GGCATTTCGTCCCCGCGCACGACCGCAACGCAGGAGGGCCTGGCCACGTTTGCCGAGCAGATCACCGGCAGCATCGATAT CGAGCGCATGAAGCGCATCAGCCTGCGCATCGAAGCGATTGCGATGGCACGCTCGGGTGCGGATTTCATCGAGGTATTTC GCTATTTCACCGCAGGCGGGCAGAGCGCTGCAGAAAGTTTTTCGTCGGCGCAGCGCGTGTTCCGCGGCGTGCCGACCAGT GGCGGCGGTGCGTTCACCAAGGACACCGTGTATCTGCGTGGTTTGGTCGCGGTGCACACCTTCTTCCGCCATTCCTTGCA GCGCGACCAGCTGCAGCTGTGCCGTTACCTGTTCGCCGGCAAGATGGCATTGGGCGATGTGGCGCGCTTTGCGCCGTTGT TCGACAGCGGCGTGCTGGTCGCGCCACGCTGGCTGCCGCCGTGGGTGAGCCGTGTCAGCGGGCTGGCCGGCATGCTGGCG TTTTCGTTGTTCGCCAACCGCATCCGCATGGATCAGCTGCAGCCGCCGGCAATGAATGTGTGA
Upstream 100 bases:
>100_bases CCAGCGCCGCCGAAAAGCTCGCCACCCGCGTTGCGCAGAACAATCGCGGCAAGGGGTCGGGCAAGCGGCCGGCCAGCGTC GATCGTCCCGGGCGGCGCTG
Downstream 100 bases:
>100_bases GGCGAGGCGTTTGCTGCCGTTGCGGCGCATCGCAGCGCCCGACAGTTGCTGACACAGCTGGCGAGACATTGTTGGGTGGG CGCGAATGGCGCGCAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MPSRKGPPDIVHHAALDARLVKAVRGVRLLALASWPRSLQEPFLNSVARGQPELPQVEYPSLDFGDTRRELAAIAKDADP HHPLGEYLIDSAHSWSLAAGLLESLGTPAVSEYSAQLFGVPEDPMPGNGPSTREAAQHFIQIARELDRELMAPEEQVPVS ATALRMQLQNDLDGFFEGRVITVTLDPDLLAKAAAGAHRIRLRTGATFSDYDRAQLFHHEALVHSLTALNGRAQVHLPSL GISSPRTTATQEGLATFAEQITGSIDIERMKRISLRIEAIAMARSGADFIEVFRYFTAGGQSAAESFSSAQRVFRGVPTS GGGAFTKDTVYLRGLVAVHTFFRHSLQRDQLQLCRYLFAGKMALGDVARFAPLFDSGVLVAPRWLPPWVSRVSGLAGMLA FSLFANRIRMDQLQPPAMNV
Sequences:
>Translated_420_residues MPSRKGPPDIVHHAALDARLVKAVRGVRLLALASWPRSLQEPFLNSVARGQPELPQVEYPSLDFGDTRRELAAIAKDADP HHPLGEYLIDSAHSWSLAAGLLESLGTPAVSEYSAQLFGVPEDPMPGNGPSTREAAQHFIQIARELDRELMAPEEQVPVS ATALRMQLQNDLDGFFEGRVITVTLDPDLLAKAAAGAHRIRLRTGATFSDYDRAQLFHHEALVHSLTALNGRAQVHLPSL GISSPRTTATQEGLATFAEQITGSIDIERMKRISLRIEAIAMARSGADFIEVFRYFTAGGQSAAESFSSAQRVFRGVPTS GGGAFTKDTVYLRGLVAVHTFFRHSLQRDQLQLCRYLFAGKMALGDVARFAPLFDSGVLVAPRWLPPWVSRVSGLAGMLA FSLFANRIRMDQLQPPAMNV >Mature_419_residues PSRKGPPDIVHHAALDARLVKAVRGVRLLALASWPRSLQEPFLNSVARGQPELPQVEYPSLDFGDTRRELAAIAKDADPH HPLGEYLIDSAHSWSLAAGLLESLGTPAVSEYSAQLFGVPEDPMPGNGPSTREAAQHFIQIARELDRELMAPEEQVPVSA TALRMQLQNDLDGFFEGRVITVTLDPDLLAKAAAGAHRIRLRTGATFSDYDRAQLFHHEALVHSLTALNGRAQVHLPSLG ISSPRTTATQEGLATFAEQITGSIDIERMKRISLRIEAIAMARSGADFIEVFRYFTAGGQSAAESFSSAQRVFRGVPTSG GGAFTKDTVYLRGLVAVHTFFRHSLQRDQLQLCRYLFAGKMALGDVARFAPLFDSGVLVAPRWLPPWVSRVSGLAGMLAF SLFANRIRMDQLQPPAMNV
Specific function: Unknown
COG id: COG3930
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45865; Mature: 45734
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRKGPPDIVHHAALDARLVKAVRGVRLLALASWPRSLQEPFLNSVARGQPELPQVEYP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC SLDFGDTRRELAAIAKDADPHHPLGEYLIDSAHSWSLAAGLLESLGTPAVSEYSAQLFGV CCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC PEDPMPGNGPSTREAAQHFIQIARELDRELMAPEEQVPVSATALRMQLQNDLDGFFEGRV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE ITVTLDPDLLAKAAAGAHRIRLRTGATFSDYDRAQLFHHEALVHSLTALNGRAQVHLPSL EEEEECHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC GISSPRTTATQEGLATFAEQITGSIDIERMKRISLRIEAIAMARSGADFIEVFRYFTAGG CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC QSAAESFSSAQRVFRGVPTSGGGAFTKDTVYLRGLVAVHTFFRHSLQRDQLQLCRYLFAG HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC KMALGDVARFAPLFDSGVLVAPRWLPPWVSRVSGLAGMLAFSLFANRIRMDQLQPPAMNV CHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PSRKGPPDIVHHAALDARLVKAVRGVRLLALASWPRSLQEPFLNSVARGQPELPQVEYP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC SLDFGDTRRELAAIAKDADPHHPLGEYLIDSAHSWSLAAGLLESLGTPAVSEYSAQLFGV CCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC PEDPMPGNGPSTREAAQHFIQIARELDRELMAPEEQVPVSATALRMQLQNDLDGFFEGRV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE ITVTLDPDLLAKAAAGAHRIRLRTGATFSDYDRAQLFHHEALVHSLTALNGRAQVHLPSL EEEEECHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC GISSPRTTATQEGLATFAEQITGSIDIERMKRISLRIEAIAMARSGADFIEVFRYFTAGG CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC QSAAESFSSAQRVFRGVPTSGGGAFTKDTVYLRGLVAVHTFFRHSLQRDQLQLCRYLFAG HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC KMALGDVARFAPLFDSGVLVAPRWLPPWVSRVSGLAGMLAFSLFANRIRMDQLQPPAMNV CHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA