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The map label for this gene is yogA [H]

Identifier: 78048603

GI number: 78048603

Start: 3470255

End: 3471262

Strand: Reverse

Name: yogA [H]

Synonym: XCV3047

Alternate gene names: 78048603

Gene position: 3471262-3470255 (Counterclockwise)

Preceding gene: 78048605

Following gene: 78048602

Centisome position: 67.03

GC content: 65.67

Gene sequence:

>1008_bases
ATGCACGCCATTCGTCTTCGCCATCCCGCCGCCATCGCATCGCTGCAGTCGGTTGCACTGCCCGATCCGGGGCAGCCTGC
ACGCGGTCAGATCCGCGTCCGCCTGCATGCCAGTTCGCTCAATTTTCATGATCTGGGCGTTGTGCTCGGGCAGATGCCGA
CCGCAGACGGGCGTATTCCGATGTCCGATGGCGCCGGCGTGGTGGAAGCAGTGGGGCCGGAGGTCGACGAGTTCGCAGTG
GGCGATCATGTGGTGTCCACCTTCTTCCCGCAGTGGCTGGACGGCGAGCCCTTGCATGCCGGTTTTGCCACCACCCCAGG
CGATGGCGTCGATGGCTATGCGCGCTCGGCGGTCGTCGCCGACGCGCAGGCATTCACCCATGCGCCCCGCGGTTACAGCC
ATGCCGAGGCTGCGACGCTGACCACTGCCGGCGTTACCGCGTGGCGCGCGCTTGCGGTCAATGGCGGGCTCAAGGCCGGC
GACAGCGTATTGGTACTAGGCACCGGCGGCGTGTCGATTTTCGCGCTGCAATTTGCCAAGGCGATGGGTGCGCGCGTGAT
CGCCACTTCCTCATCCGACGAGAAACTGGAAAAGGTGCGAGCGCTCGGCGCCGACCACCTCATCAACTATCGGCAGCATC
CCGAATGGGCGGCGCAGGTCCTGGACATCACCGAAGGGCGTGGGGTGGACCATGTGGTCGAGGTCGGTGGCCCGGGCACG
CTGACGCAATCGATCCGTGCAGCGCGCGTGGATGGGCATATCGCCTTGATCGGCGTCTTGACCGGTGCCGCTGGGCCGGT
TCCGACTGCCGAAATGATGGGGCGCCAGCAACGCCTGCAGGGGTTGGTCGTTGGCAGCCGCAGGCATCAACAGAACCTGG
TGCGCGCACTTGACAGCTTGCCGCTGCGGCCGGTGATCGATCGCAGCTTTGCGCTGGATGAGATCGGTGAAGCGTTCGCG
CTGCAGAAGGCCGGTGGGCATCTCGGCAAGATCGCGCTGGAGTTCTGA

Upstream 100 bases:

>100_bases
CTTCACCACGCACCGCGACAGATGTCAGAGCCAGCTCGACTGCGTTTGCGTAACGGGCAGCATGCTATCCCGGGTACTGA
ATCACGCTCAGGAGTTCCCC

Downstream 100 bases:

>100_bases
TCCAGCCCGCGGTACTGAGCGCGGGCGATGCGTCCGCAGCGCCGGCGCGTGAATTCCGTAGTTCGACGTGTGCAAGGGCC
GCCGCCTGCATGACGCTGCT

Product: putative alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MHAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIPMSDGAGVVEAVGPEVDEFAV
GDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVADAQAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAG
DSVLVLGTGGVSIFALQFAKAMGARVIATSSSDEKLEKVRALGADHLINYRQHPEWAAQVLDITEGRGVDHVVEVGGPGT
LTQSIRAARVDGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQNLVRALDSLPLRPVIDRSFALDEIGEAFA
LQKAGGHLGKIALEF

Sequences:

>Translated_335_residues
MHAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIPMSDGAGVVEAVGPEVDEFAV
GDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVADAQAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAG
DSVLVLGTGGVSIFALQFAKAMGARVIATSSSDEKLEKVRALGADHLINYRQHPEWAAQVLDITEGRGVDHVVEVGGPGT
LTQSIRAARVDGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQNLVRALDSLPLRPVIDRSFALDEIGEAFA
LQKAGGHLGKIALEF
>Mature_335_residues
MHAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIPMSDGAGVVEAVGPEVDEFAV
GDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVADAQAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAG
DSVLVLGTGGVSIFALQFAKAMGARVIATSSSDEKLEKVRALGADHLINYRQHPEWAAQVLDITEGRGVDHVVEVGGPGT
LTQSIRAARVDGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQNLVRALDSLPLRPVIDRSFALDEIGEAFA
LQKAGGHLGKIALEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=355, Percent_Identity=27.6056338028169, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI22538444, Length=355, Percent_Identity=27.6056338028169, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI194239674, Length=330, Percent_Identity=25.1515151515152, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI13236495, Length=330, Percent_Identity=25.1515151515152, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI47519420, Length=217, Percent_Identity=31.3364055299539, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI28557745, Length=225, Percent_Identity=30.6666666666667, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI194239676, Length=330, Percent_Identity=25.4545454545455, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI156627571, Length=332, Percent_Identity=25.3012048192771, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87082125, Length=348, Percent_Identity=26.7241379310345, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790485, Length=262, Percent_Identity=27.4809160305344, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87081918, Length=325, Percent_Identity=26.7692307692308, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17507255, Length=324, Percent_Identity=26.8518518518519, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71988145, Length=342, Percent_Identity=24.5614035087719, Blast_Score=68, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6324486, Length=312, Percent_Identity=26.2820512820513, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323961, Length=311, Percent_Identity=25.7234726688103, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323729, Length=335, Percent_Identity=25.9701492537313, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319621, Length=339, Percent_Identity=25.3687315634218, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 35018; Mature: 35018

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIP
CCCEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCEE
MSDGAGVVEAVGPEVDEFAVGDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVA
CCCCCCCHHHCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
DAQAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAGDSVLVLGTGGVSIFALQFAK
HHHHHHCCCCCCCCCHHHHEEHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHHHHHHHH
AMGARVIATSSSDEKLEKVRALGADHLINYRQHPEWAAQVLDITEGRGVDHVVEVGGPGT
HHCCEEEEECCCHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCH
LTQSIRAARVDGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQNLVRALDSL
HHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCHHHHHHEEEECCHHHHHHHHHHHHCC
PLRPVIDRSFALDEIGEAFALQKAGGHLGKIALEF
CCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MHAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIP
CCCEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCEE
MSDGAGVVEAVGPEVDEFAVGDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVA
CCCCCCCHHHCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
DAQAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAGDSVLVLGTGGVSIFALQFAK
HHHHHHCCCCCCCCCHHHHEEHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHHHHHHHH
AMGARVIATSSSDEKLEKVRALGADHLINYRQHPEWAAQVLDITEGRGVDHVVEVGGPGT
HHCCEEEEECCCHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCH
LTQSIRAARVDGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQNLVRALDSL
HHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCHHHHHHEEEECCHHHHHHHHHHHHCC
PLRPVIDRSFALDEIGEAFALQKAGGHLGKIALEF
CCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]