Click here to switch to the map view.

The map label for this gene is 78048035

Identifier: 78048035

GI number: 78048035

Start: 2799162

End: 2799371

Strand: Reverse

Name: 78048035

Synonym: XCV2479

Alternate gene names: NA

Gene position: 2799371-2799162 (Counterclockwise)

Preceding gene: 78048036

Following gene: 78048032

Centisome position: 54.06

GC content: 61.43

Gene sequence:

>210_bases
ATGAGCTACGCCTTCGACGAGGAGGACGGACGGCTATTCGTCGCGCTGAATCCTCAGATTGCAGAGGCGATTCTTGGGCG
TCGCCCGTATACCCGCATCGAGATGGCCGAGGTGCGGGCGCTCCAAACCGACCCGGCTCGCCTGATTCATCAACGGCTGT
GCGGCTGGATCGACCCTGGGGTTCTACCCCGATATCACGGACGGTTGTAA

Upstream 100 bases:

>100_bases
ATGGCGGCGACATATCAGGGCGATCAAGGCGAGCTTGCTGCGCATGGCAAACGTGACGGTGGTCGTCACCAAGGAGAGCA
GGCAAAGGTCTTTTCACCTG

Downstream 100 bases:

>100_bases
AAGAGCTGCAACCTTCTGATCCTGCTTGGCCGCCCTTCGCCGCATCCTTGGGTTGTGGCGTCGCTCGATGTAGTCAAACA
CATCCGCTCTTGCTCCATCC

Product: putative replication protein C (fragment)

Products: NA

Alternate protein names: Replication Protein C; Replication Protein RepC; Initiatior Protein

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MSYAFDEEDGRLFVALNPQIAEAILGRRPYTRIEMAEVRALQTDPARLIHQRLCGWIDPGVLPRYHGRL

Sequences:

>Translated_69_residues
MSYAFDEEDGRLFVALNPQIAEAILGRRPYTRIEMAEVRALQTDPARLIHQRLCGWIDPGVLPRYHGRL
>Mature_68_residues
SYAFDEEDGRLFVALNPQIAEAILGRRPYTRIEMAEVRALQTDPARLIHQRLCGWIDPGVLPRYHGRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7964; Mature: 7833

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAFDEEDGRLFVALNPQIAEAILGRRPYTRIEMAEVRALQTDPARLIHQRLCGWIDPG
CCCCCCCCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
VLPRYHGRL
CCCCCCCCC
>Mature Secondary Structure 
SYAFDEEDGRLFVALNPQIAEAILGRRPYTRIEMAEVRALQTDPARLIHQRLCGWIDPG
CCCCCCCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
VLPRYHGRL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA