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The map label for this gene is 78048032

Identifier: 78048032

GI number: 78048032

Start: 2797211

End: 2797954

Strand: Reverse

Name: 78048032

Synonym: XCV2476

Alternate gene names: NA

Gene position: 2797954-2797211 (Counterclockwise)

Preceding gene: 78048035

Following gene: 78048028

Centisome position: 54.03

GC content: 57.8

Gene sequence:

>744_bases
ATGTCTTTGGAACATACGATTGATCAGCTACGAACGCTCAAATTGACCGGCATGGTGGCTGGCGTCGAACATCAGCTCGC
CCAATCCAGCTACGGAGCACTCGGCTTCGATCAGCGCCTTGGCCATCTGGTTGACGCCGAGGTGAGTCAGCGCGACAGCA
AGCGCTTCACGCGCCTGATTCGCAATGCCAAGCTCAAGGTCTACGCCGAACCGGAGGCTATTGACTATCGTGTTGGGCGC
GGGTTGGATCGATCGGTGATCGCGGATTTGCTGACCTGTGGCTGGATTGAGCACCGCCAAAACGTTTTGGTCACTGGACA
GACAGGTACTGGAAAGACCTGGTTGGCATGTGCCCTGGCCGTACAAGCCGCACGCCAAGGGATCACCGTAGGCTACCGGC
GCGTAGGCCGCCTGTTGGAAGACATGGAGGTTGGGCATGCGGACGGCTCACTGGCCAAGCTTCGCAATCAACTCGCCAGG
ACCGGCCTACTAATCTTGGATGATTTCGGCCTGACGCCGCTGAGCAGCCGCGGACGTGCAGATCTACTGGAATTACTCGA
TGACCGTGTCGGCTCTGGCGCCACGATTGTGGCTGGCCAGATGCCAGTGCAGGACTGGCATGCGTTTATCCATGACCCTG
CTTTGGCTGATGCCATCATGGATCGACTGATTCACAGCAGCCACAAACTAGCGCTCAAGGGTGAATCCATGCGAAAGACG
AAGGCAGCCAAGTCCTGGAAGTGA

Upstream 100 bases:

>100_bases
GTGAACTTCCTGCGCTTTGACATGAACACTCCTCATGGCCTTGATCGGCCTTCTTGTAAGTGTCCGTGAAAACGGGGGTG
AACCCTTCAGGGAGAACATT

Downstream 100 bases:

>100_bases
GTGCTGGCGGCGCTGTCCAGCGCTTCTGGCGCTCGCATCCAATTCATTTGGCGGCGGTGTCCAGTTCCGTCGCCGATGAG
TGTCCAGTTGGTTGGCTTTT

Product: putative IstB-like ATP binding protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSLEHTIDQLRTLKLTGMVAGVEHQLAQSSYGALGFDQRLGHLVDAEVSQRDSKRFTRLIRNAKLKVYAEPEAIDYRVGR
GLDRSVIADLLTCGWIEHRQNVLVTGQTGTGKTWLACALAVQAARQGITVGYRRVGRLLEDMEVGHADGSLAKLRNQLAR
TGLLILDDFGLTPLSSRGRADLLELLDDRVGSGATIVAGQMPVQDWHAFIHDPALADAIMDRLIHSSHKLALKGESMRKT
KAAKSWK

Sequences:

>Translated_247_residues
MSLEHTIDQLRTLKLTGMVAGVEHQLAQSSYGALGFDQRLGHLVDAEVSQRDSKRFTRLIRNAKLKVYAEPEAIDYRVGR
GLDRSVIADLLTCGWIEHRQNVLVTGQTGTGKTWLACALAVQAARQGITVGYRRVGRLLEDMEVGHADGSLAKLRNQLAR
TGLLILDDFGLTPLSSRGRADLLELLDDRVGSGATIVAGQMPVQDWHAFIHDPALADAIMDRLIHSSHKLALKGESMRKT
KAAKSWK
>Mature_246_residues
SLEHTIDQLRTLKLTGMVAGVEHQLAQSSYGALGFDQRLGHLVDAEVSQRDSKRFTRLIRNAKLKVYAEPEAIDYRVGRG
LDRSVIADLLTCGWIEHRQNVLVTGQTGTGKTWLACALAVQAARQGITVGYRRVGRLLEDMEVGHADGSLAKLRNQLART
GLLILDDFGLTPLSSRGRADLLELLDDRVGSGATIVAGQMPVQDWHAFIHDPALADAIMDRLIHSSHKLALKGESMRKTK
AAKSWK

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690 [H]

Pfam domain/function: PF01695 IstB; PF08483 IstB_N [H]

EC number: NA

Molecular weight: Translated: 27155; Mature: 27023

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00675 SIGMA54_INTERACT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLEHTIDQLRTLKLTGMVAGVEHQLAQSSYGALGFDQRLGHLVDAEVSQRDSKRFTRLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNAKLKVYAEPEAIDYRVGRGLDRSVIADLLTCGWIEHRQNVLVTGQTGTGKTWLACALA
HCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
VQAARQGITVGYRRVGRLLEDMEVGHADGSLAKLRNQLARTGLLILDDFGLTPLSSRGRA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHH
DLLELLDDRVGSGATIVAGQMPVQDWHAFIHDPALADAIMDRLIHSSHKLALKGESMRKT
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHH
KAAKSWK
HHHCCCC
>Mature Secondary Structure 
SLEHTIDQLRTLKLTGMVAGVEHQLAQSSYGALGFDQRLGHLVDAEVSQRDSKRFTRLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNAKLKVYAEPEAIDYRVGRGLDRSVIADLLTCGWIEHRQNVLVTGQTGTGKTWLACALA
HCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
VQAARQGITVGYRRVGRLLEDMEVGHADGSLAKLRNQLARTGLLILDDFGLTPLSSRGRA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHH
DLLELLDDRVGSGATIVAGQMPVQDWHAFIHDPALADAIMDRLIHSSHKLALKGESMRKT
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHH
KAAKSWK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]