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The map label for this gene is 78048036

Identifier: 78048036

GI number: 78048036

Start: 2799416

End: 2799865

Strand: Reverse

Name: 78048036

Synonym: XCV2480

Alternate gene names: NA

Gene position: 2799865-2799416 (Counterclockwise)

Preceding gene: 78048037

Following gene: 78048035

Centisome position: 54.07

GC content: 58.67

Gene sequence:

>450_bases
ATGAGGAAAGACGTGATGGTCGGAGGCGAGGCGATGGCTTTTGACCTTACCCATGCCAGGCACGATCCAATGCACTGCTT
GGTCCCCGGTTTGTTCCGCAGTCTCAAGCGCGGCGAACGGAAGAAGCTCAAGCTCGACGTGACGTATCACTACGCCGAGA
ATGAACAAGCGCGGTTCGTCGGCTTCGAGCCTCTTGGTGCAGATGACATGCGGCTGCTGCAAGGTCTTGTGGCTCTTGGA
GGGCCGAAGGGCATCATCCTGACGCCAGAGCCAACAGCGGACTTGCCGAGGCAACTCCGTCTATTCCTTGAGCCGAAGTT
CGACGCGGTAGGGCAGGATGCGCTGGTCGTGAGAGAGAGTATGACCAGCCTGCTATGCGAAATCGGCTTGACCGATGGCG
GCGACATATCAGGGCGATCAAGGCGAGCTTGCTGCGCATGGCAAACGTGA

Upstream 100 bases:

>100_bases
GTCAGCAAGCAGAACTACGACGCCACGCCGCTTGATCGCTGGTACATGCGGCACGCCGGCGGCGTGCTGGTGCCGGTGGA
GCTGTATGAGGCCAGCAGGA

Downstream 100 bases:

>100_bases
CGGTGGTCGTCACCAAGGAGAGCAGGCAAAGGTCTTTTCACCTGATGAGCTACGCCTTCGACGAGGAGGACGGACGGCTA
TTCGTCGCGCTGAATCCTCA

Product: putative replication protein C (fragment)

Products: NA

Alternate protein names: Replication Protein C; Replication Protein RepC; Initiatior Protein; Replication Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRKDVMVGGEAMAFDLTHARHDPMHCLVPGLFRSLKRGERKKLKLDVTYHYAENEQARFVGFEPLGADDMRLLQGLVALG
GPKGIILTPEPTADLPRQLRLFLEPKFDAVGQDALVVRESMTSLLCEIGLTDGGDISGRSRRACCAWQT

Sequences:

>Translated_149_residues
MRKDVMVGGEAMAFDLTHARHDPMHCLVPGLFRSLKRGERKKLKLDVTYHYAENEQARFVGFEPLGADDMRLLQGLVALG
GPKGIILTPEPTADLPRQLRLFLEPKFDAVGQDALVVRESMTSLLCEIGLTDGGDISGRSRRACCAWQT
>Mature_149_residues
MRKDVMVGGEAMAFDLTHARHDPMHCLVPGLFRSLKRGERKKLKLDVTYHYAENEQARFVGFEPLGADDMRLLQGLVALG
GPKGIILTPEPTADLPRQLRLFLEPKFDAVGQDALVVRESMTSLLCEIGLTDGGDISGRSRRACCAWQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16509; Mature: 16509

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDVMVGGEAMAFDLTHARHDPMHCLVPGLFRSLKRGERKKLKLDVTYHYAENEQARFV
CCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEE
GFEPLGADDMRLLQGLVALGGPKGIILTPEPTADLPRQLRLFLEPKFDAVGQDALVVRES
ECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHH
MTSLLCEIGLTDGGDISGRSRRACCAWQT
HHHHHHHHCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MRKDVMVGGEAMAFDLTHARHDPMHCLVPGLFRSLKRGERKKLKLDVTYHYAENEQARFV
CCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEE
GFEPLGADDMRLLQGLVALGGPKGIILTPEPTADLPRQLRLFLEPKFDAVGQDALVVRES
ECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHH
MTSLLCEIGLTDGGDISGRSRRACCAWQT
HHHHHHHHCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA