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The map label for this gene is 78048000

Identifier: 78048000

GI number: 78048000

Start: 2778014

End: 2778454

Strand: Reverse

Name: 78048000

Synonym: XCV2444

Alternate gene names: NA

Gene position: 2778454-2778014 (Counterclockwise)

Preceding gene: 78048001

Following gene: 78047999

Centisome position: 53.65

GC content: 68.93

Gene sequence:

>441_bases
ATGACGCTCCCGCACCTCGCCTGGTATTGGCCGCTGATTGGTGGGCTGATGATCGGCACCGCCTCTGGCGCGTATTTACT
GCTGGTCGGCCGCATCGCCGGCATCTCCGGCCTGCTCGCCGATGCGCTCGGTCTGCACGCGGGCGGCGCGCGCTCGCTGT
CCATCCTGTTCCTGGCCGGGCTTCTGACAAGCGCAGGTGTGGCATTGGCGCTCAAGCCCATCACGCTCGCGCCGCTGAGC
GGCACCAGCATGCCGGTGCTGATCGTGGCCGGCGTGCTGGTGGGCTATGGAACCCGTCTGGGTGCCGGCTGCACCAGCGG
GCACGGAGTGAGCGGCCTGGCAAGACTGTCGCCGCGCTCGATCGTCGCCACCACCGTGTTCATGCTGCTGGGCATGGCAA
CAGTGACGGCCGTGCGGGCTGTCGCTGGAGCGGGCGCATGA

Upstream 100 bases:

>100_bases
GCCTTCTGCTTCCATCGGTGCAAGTCAACATGCGCGCCGGTCATCTGCCCACGCCGGAAGACAACGGCGTGCGTTATCTG
AAGCTGCCGTTGGACGTGCT

Downstream 100 bases:

>100_bases
TCCGCGTGGCGGCTTTTCTCTGCGGCGCCTTGTTCGGGTTGGGCCTGGTGATTTCGGACATGGCCAATCCTGCACGCGTC
CTTGCCTTCCTCGATGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTLPHLAWYWPLIGGLMIGTASGAYLLLVGRIAGISGLLADALGLHAGGARSLSILFLAGLLTSAGVALALKPITLAPLS
GTSMPVLIVAGVLVGYGTRLGAGCTSGHGVSGLARLSPRSIVATTVFMLLGMATVTAVRAVAGAGA

Sequences:

>Translated_146_residues
MTLPHLAWYWPLIGGLMIGTASGAYLLLVGRIAGISGLLADALGLHAGGARSLSILFLAGLLTSAGVALALKPITLAPLS
GTSMPVLIVAGVLVGYGTRLGAGCTSGHGVSGLARLSPRSIVATTVFMLLGMATVTAVRAVAGAGA
>Mature_145_residues
TLPHLAWYWPLIGGLMIGTASGAYLLLVGRIAGISGLLADALGLHAGGARSLSILFLAGLLTSAGVALALKPITLAPLSG
TSMPVLIVAGVLVGYGTRLGAGCTSGHGVSGLARLSPRSIVATTVFMLLGMATVTAVRAVAGAGA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 14332; Mature: 14201

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPHLAWYWPLIGGLMIGTASGAYLLLVGRIAGISGLLADALGLHAGGARSLSILFLAG
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLTSAGVALALKPITLAPLSGTSMPVLIVAGVLVGYGTRLGAGCTSGHGVSGLARLSPRS
HHHHCCCEEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHH
IVATTVFMLLGMATVTAVRAVAGAGA
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLPHLAWYWPLIGGLMIGTASGAYLLLVGRIAGISGLLADALGLHAGGARSLSILFLAG
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLTSAGVALALKPITLAPLSGTSMPVLIVAGVLVGYGTRLGAGCTSGHGVSGLARLSPRS
HHHHCCCEEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHH
IVATTVFMLLGMATVTAVRAVAGAGA
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]