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The map label for this gene is thcC [H]

Identifier: 78047736

GI number: 78047736

Start: 2507980

End: 2508288

Strand: Reverse

Name: thcC [H]

Synonym: XCV2180

Alternate gene names: 78047736

Gene position: 2508288-2507980 (Counterclockwise)

Preceding gene: 78047737

Following gene: 78047735

Centisome position: 48.44

GC content: 66.99

Gene sequence:

>309_bases
ATGCCCACCATCACCTACATCGAACCGAGCGGCGAGACCGTGGCGGTCGACCTCGCGCCGGGATGGACCCTGATGCAAGG
GGCCATGCATCACGGCATCGATGGCATCGAAGCGCAGTGCGGCGGCTCCTGTGCGTGCGCCACCTGCCATTGCTACGTGG
AGGCCGGCGGCCAGGACCTGCCACTGCTGGACATGGAGGCCGGCATGCTCGACAGCGTGGCGGCCGAACGGCGCAGCAAC
AGCCGGCTGGCGTGCCAGCTCGTACCGACATCGGACATGACCGTACGCTTTCCGGATCGGCAGACATGA

Upstream 100 bases:

>100_bases
CATCGACCACTTCACGCTGACCGGGCCGGTGCAACGCATTCCCAACAGCATCACCCGTGGGCTGTCGCATCTGCCCATGC
GCGCGCACTAGGAAGCGACC

Downstream 100 bases:

>100_bases
GCCTGCGTACGGCAGGTGCGCGATGAGCGGCATGGTCATCGTCGGTGCGGGTCAGGCGGGCCTGCAGACCGCCGAATCCC
TGCGCAGCGGCGGCTATACG

Product: putative ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MPTITYIEPSGETVAVDLAPGWTLMQGAMHHGIDGIEAQCGGSCACATCHCYVEAGGQDLPLLDMEAGMLDSVAAERRSN
SRLACQLVPTSDMTVRFPDRQT

Sequences:

>Translated_102_residues
MPTITYIEPSGETVAVDLAPGWTLMQGAMHHGIDGIEAQCGGSCACATCHCYVEAGGQDLPLLDMEAGMLDSVAAERRSN
SRLACQLVPTSDMTVRFPDRQT
>Mature_101_residues
PTITYIEPSGETVAVDLAPGWTLMQGAMHHGIDGIEAQCGGSCACATCHCYVEAGGQDLPLLDMEAGMLDSVAAERRSNS
RLACQLVPTSDMTVRFPDRQT

Specific function: Ferredoxin-type protein which transfers electrons from rhodocoxin reductase to cytochrome CYP116 (ThcB), which is involved in the degradation of thiocarbamate herbicides [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 10830; Mature: 10699

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
10.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTITYIEPSGETVAVDLAPGWTLMQGAMHHGIDGIEAQCGGSCACATCHCYVEAGGQDL
CCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
PLLDMEAGMLDSVAAERRSNSRLACQLVPTSDMTVRFPDRQT
CEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCC
>Mature Secondary Structure 
PTITYIEPSGETVAVDLAPGWTLMQGAMHHGIDGIEAQCGGSCACATCHCYVEAGGQDL
CEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
PLLDMEAGMLDSVAAERRSNSRLACQLVPTSDMTVRFPDRQT
CEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]