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The map label for this gene is ydgJ [H]

Identifier: 78046298

GI number: 78046298

Start: 845886

End: 846941

Strand: Reverse

Name: ydgJ [H]

Synonym: XCV0742

Alternate gene names: 78046298

Gene position: 846941-845886 (Counterclockwise)

Preceding gene: 78046304

Following gene: 78046289

Centisome position: 16.36

GC content: 66.57

Gene sequence:

>1056_bases
ATGCCTAAACTGTTCAATCTGGCCGTCGTCGGCTATGGCTATGTCGGCCGCACCTTTCATGCACCGCTGATCGCAAGCAC
CCCCGGCCTGCAGTTGCACAGCGTGGTGTCGTCCAAGCCGCAACAGCCACAGGCCGACTTTCCCGGCGTCACCGTGGTGG
CCGATCTGGACAGTGCGCTGGCCGATCCGGCACTGGATGCCGTGGTGCTGGCCACCCCGAACCACACCCATGCATCCTTC
GCGCTGAAAGCCCTGGCCGCCGGCAAGCATGTGCTGGTGGACAAGCCGTTTGCATTGGATGCGGCGCAAGCGCAGCAGAT
GGTCGATGCCGCCGATGCGGCGGGATGCATCATCAGCGTGTTCCAGAATCGCCGCTGGGATGCGGACTTTCTCACCGTGC
GCCGGCTGATCGAAGAAGGCCAGCTGGGCGAGGTGGTGGAATTTCATTCGCACTTCGACCGCTATCGCCCGCAGGTGCGC
GACCGTTGGCGCGAGAGCGACAGCCCCGGTGCCGGACTGTGGTACGACCTGGGCCCGCATCTGCTCGATCAGGCAATGCA
GTTGTTCGGTATGCCGCAGGGCATTGGCGCGGATCTGCAACGTCAGCGCGACCAGGCGCGCAGCGTGGATTATTTCCACG
TCACCCTGCACTACCCTCGGCTGCGCGTGATTCTGCACGCGGGGTCGCTGGTGGCCGATGGCCGCCTGCGCTTCGCCGTG
CATGGCACGCGCGGCAGTTATCTCAAGCACGGCCTGGATACGCAGGAAGACCAGCTGCGCGCCGGCCGTCGCCCCGGCAC
GGTCGGCTGGGGCGTGGACCCGTTACCGGGCACGCTCACCCGCGTCGATGACGAAGGCCGCGTCCACACCCATCAGCCCG
ACAACCTGCCGGGCGACTATCGGCAGTGCTACGCCGCCTTTCGCGACGCGCTGGCAGGCACCGGCACAGCGCCGGTCAGC
AGCAGCGATGCGGTGCAACTGATGCGGTTGGTGGACCTTGCGCAACGCAGCGCTGCGGACGGCCGAGTGCAGTGGCTGGA
TGCCGCGCGCGGTTGA

Upstream 100 bases:

>100_bases
AGCAGACGTGACCGTTGCATGCAGAGGTTGTGAACCCTGCGCACACGGGCAGGTGCAATACCATGCGGGCTCCCTCCGTC
GTTGCGATGAACCGTTTTCA

Downstream 100 bases:

>100_bases
TCACGCTGCAACGGTTCTGCACTTCCAACAGCGCGCGCCGCAGTCCCGGCGCGCACCGTGGTTGCATCCAAGTCCTTACG
CGTCCTTGCTACCGATGGTC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSALADPALDAVVLATPNHTHASF
ALKALAAGKHVLVDKPFALDAAQAQQMVDAADAAGCIISVFQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVR
DRWRESDSPGAGLWYDLGPHLLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGRLRFAV
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDYRQCYAAFRDALAGTGTAPVS
SSDAVQLMRLVDLAQRSAADGRVQWLDAARG

Sequences:

>Translated_351_residues
MPKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSALADPALDAVVLATPNHTHASF
ALKALAAGKHVLVDKPFALDAAQAQQMVDAADAAGCIISVFQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVR
DRWRESDSPGAGLWYDLGPHLLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGRLRFAV
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDYRQCYAAFRDALAGTGTAPVS
SSDAVQLMRLVDLAQRSAADGRVQWLDAARG
>Mature_350_residues
PKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSALADPALDAVVLATPNHTHASFA
LKALAAGKHVLVDKPFALDAAQAQQMVDAADAAGCIISVFQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVRD
RWRESDSPGAGLWYDLGPHLLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGRLRFAVH
GTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDYRQCYAAFRDALAGTGTAPVSS
SDAVQLMRLVDLAQRSAADGRVQWLDAARG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=338, Percent_Identity=51.4792899408284, Blast_Score=335, Evalue=2e-93,
Organism=Escherichia coli, GI1789848, Length=347, Percent_Identity=32.8530259365994, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787574, Length=190, Percent_Identity=30, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082405, Length=269, Percent_Identity=26.7657992565056, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323975, Length=231, Percent_Identity=24.6753246753247, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38356; Mature: 38224

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSAL
CCCEEEEEEEECCCCCCHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEECCHHHH
ADPALDAVVLATPNHTHASFALKALAAGKHVLVDKPFALDAAQAQQMVDAADAAGCIISV
CCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
FQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVRDRWRESDSPGAGLWYDLGPH
HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHCCHH
LLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGRLRFAV
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEEECCCEEECCEEEEEE
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDY
ECCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCHHH
RQCYAAFRDALAGTGTAPVSSSDAVQLMRLVDLAQRSAADGRVQWLDAARG
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure 
PKLFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFPGVTVVADLDSAL
CCEEEEEEEECCCCCCHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEECCHHHH
ADPALDAVVLATPNHTHASFALKALAAGKHVLVDKPFALDAAQAQQMVDAADAAGCIISV
CCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
FQNRRWDADFLTVRRLIEEGQLGEVVEFHSHFDRYRPQVRDRWRESDSPGAGLWYDLGPH
HHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHCCHH
LLDQAMQLFGMPQGIGADLQRQRDQARSVDYFHVTLHYPRLRVILHAGSLVADGRLRFAV
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEECCEEEEEEECCCEEECCEEEEEE
HGTRGSYLKHGLDTQEDQLRAGRRPGTVGWGVDPLPGTLTRVDDEGRVHTHQPDNLPGDY
ECCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCHHH
RQCYAAFRDALAGTGTAPVSSSDAVQLMRLVDLAQRSAADGRVQWLDAARG
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]