| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046289
Identifier: 78046289
GI number: 78046289
Start: 836196
End: 837059
Strand: Reverse
Name: 78046289
Synonym: XCV0733
Alternate gene names: NA
Gene position: 837059-836196 (Counterclockwise)
Preceding gene: 78046298
Following gene: 78046287
Centisome position: 16.16
GC content: 64.93
Gene sequence:
>864_bases ATGCCACGCTCCATCGCGCAGGTGCTGCGCCGCCTTCTCGCAATCGGTGCACTGTTGTGTATCGCCTTACCCGCGCTGGC TGTCACGCCGGCCGCGCCACTGCGGGTCATGTCGTTCAACGTGCGCGTGCCGGCCGATACCGATGGCGACAAACGCTGGC AGGTGCGTCGCGCTGCCATGGTCGCGTTGATCAAACAGACGCATCCGGACGTGTTCGGCACGCAGGAACTGGTGAGCGAA CAGGCTGCCTTTCTGGCCGAACAGTTGCCCGACTACCGCTGGTTCGGCCAGGGCCGGCGCGGCGATGACAGCGACGAGCA CATGGGCGTGTTCTACGACGCGCGTGTACTGCAGGTGGTGGAGTCGGGCAACTTCTGGCTGTCCGACACGCCCGAACGCG CCGGCAGCATTACCTGGGGCAATGTGCTGCCACGCATGGCCACCTGGGCGCTGTTCGAGCGACGCAGCGACAAAAGCCGC TTTTATCTGTTCAACACGCACTTTCCGTATCGCGATGAGGACGAGCCCGCCCGCGAGCGCAGCGCGCGCCTGATCCTGTC GCGCATCGCGCAGTTGCCCGCCACTGTCCCGGTGGTGCTGACCGGCGACTTCAACAGCGATCCGGACAAAATCACCTACC CCACGCTGACCGCGGTACTTCGCGATGCACGTGCACAGGCCAGCAAGCGCAGCGGGCCGGAAAACACCTTCCAGGACTTC ACCACGCACCCGACCCGGCGCATCGACTGGATCCTGTATCGCGGATTGCGTCCTACACGCTTCGCAACCCTGGACGATCG TCCCGGCGGCATTCTGCCGTCGGACCATTACCCGGTGATGGCCGAGTTCGACTGGCCACGCTGA
Upstream 100 bases:
>100_bases AAGCGGCCACTTGCCTCTGCATCGGTGGTCGTCGCCGTGACGCAGCGGTCATCATCTCTGGCTAGACTCGGCGCTCTTGT TCTTCAAGGAATTTCCCTGC
Downstream 100 bases:
>100_bases GGATAAGAGCGCGCAAGAGCCAGCGGCCGGCAGCCGGCGCGCGCGCCGGCGGTGGCACGGTCCAGCCGATGCACGCAGCG CTGCGGTGATCAAGCCGGGT
Product: putative secreted protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Metal-Dependent Hydrolase; Secreted Protein
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPRSIAQVLRRLLAIGALLCIALPALAVTPAAPLRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSE QAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLQVVESGNFWLSDTPERAGSITWGNVLPRMATWALFERRSDKSR FYLFNTHFPYRDEDEPARERSARLILSRIAQLPATVPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF TTHPTRRIDWILYRGLRPTRFATLDDRPGGILPSDHYPVMAEFDWPR
Sequences:
>Translated_287_residues MPRSIAQVLRRLLAIGALLCIALPALAVTPAAPLRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSE QAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLQVVESGNFWLSDTPERAGSITWGNVLPRMATWALFERRSDKSR FYLFNTHFPYRDEDEPARERSARLILSRIAQLPATVPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF TTHPTRRIDWILYRGLRPTRFATLDDRPGGILPSDHYPVMAEFDWPR >Mature_286_residues PRSIAQVLRRLLAIGALLCIALPALAVTPAAPLRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQ AAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLQVVESGNFWLSDTPERAGSITWGNVLPRMATWALFERRSDKSRF YLFNTHFPYRDEDEPARERSARLILSRIAQLPATVPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDFT THPTRRIDWILYRGLRPTRFATLDDRPGGILPSDHYPVMAEFDWPR
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32641; Mature: 32510
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSIAQVLRRLLAIGALLCIALPALAVTPAAPLRVMSFNVRVPADTDGDKRWQVRRAAM CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH VALIKQTHPDVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLQVV HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHH ESGNFWLSDTPERAGSITWGNVLPRMATWALFERRSDKSRFYLFNTHFPYRDEDEPARER HCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH SARLILSRIAQLPATVPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF HHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH TTHPTRRIDWILYRGLRPTRFATLDDRPGGILPSDHYPVMAEFDWPR HCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure PRSIAQVLRRLLAIGALLCIALPALAVTPAAPLRVMSFNVRVPADTDGDKRWQVRRAAM CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH VALIKQTHPDVFGTQELVSEQAAFLAEQLPDYRWFGQGRRGDDSDEHMGVFYDARVLQVV HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHH ESGNFWLSDTPERAGSITWGNVLPRMATWALFERRSDKSRFYLFNTHFPYRDEDEPARER HCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH SARLILSRIAQLPATVPVVLTGDFNSDPDKITYPTLTAVLRDARAQASKRSGPENTFQDF HHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH TTHPTRRIDWILYRGLRPTRFATLDDRPGGILPSDHYPVMAEFDWPR HCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA