BacMap

Definition	Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession	NC_007508
Length	5,178,466

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The map label for this gene is fabG [H]

Identifier: 78046304

GI number: 78046304

Start: 852276

End: 853013

Strand: Reverse

Name: fabG [H]

Synonym: XCV0748

Alternate gene names: 78046304

Gene position: 853013-852276 (Counterclockwise)

Preceding gene: 78046307

Following gene: 78046298

Centisome position: 16.47

GC content: 68.56

Gene sequence:

>738_bases
ATGACAGACAGTTCCAAGGTGGTGTTGATCACCGGTGCCGCCCGCCGCATCGGCGCGCAGATCGCCACCACGCTGCACGC
TGCCGGCTACCGCGTTGCACTGCACGCACACCGTTCCGCCGAGGTGCTCGACGCACGCGTGGCCGAACTGTGCGCCCAGC
GTGCCGGCAGCGCACATGCCTTGCACGCCGATCTGCGGTTGCCCGACGCACCTGCGCAGTTGGTGGCCGACTGCGTCGCC
GCCTTCGGTCGCCTGGATGGGGTGGTCAACAACGCCTCGGCGTTCTACTCCACCGCCATTGGCGAGGCCACTGCAGCGCA
ATGGGACGAGTTGTTTGCGGTCAATGCACGCGCGCCGTTCTTCATCGCGCAAGCGGCCGCCGCACAGTTGCGCCAGCGCC
GCGGGGCCATCGTCAACCTCACCGATCTGCACGCGCAGCAGCCGATGCGCAACCACCCGCTGTACGGCGCCTCCAAGAGC
GCGCTGGAAATGCTGACCCGTTCGCTGGCGCTGGAACTGGCGCCGCACGTGCGTGTCAACGCGGTCGCGCCTGGCGCCAT
CCTGTGGCCGGAAGAAGGCAAGTCCGCCGATGCCAAGCAGGCGTTGCTCGCGCGTACGCCGCTGGCGCGCATCGGCACGC
CGGAGGAAATTGCCGAAGCGGTGCGCTGGTTGCTGGACGAGGCCAGCTTCGTCACCGGCCATACCCTGCACGTCGATGGC
GGCCGCCAGCTCAGCTGA

Upstream 100 bases:

>100_bases
GTCCGGATCGGGTGTGGGAAGGTCGGCGTGCATGCGGGCACCGGTTGCGGGGACAATGCACAGGATAGCCGAGCCCTCCG
CAACGCCGAGCGAGTACGCC

Downstream 100 bases:

>100_bases
ACGACGCTTCCGGGGCCTGCGCACTTTCGCTGCGCAGGGACGCCCCCGTGTCATGCACGTGCGCCCGGTTGCCACCTCGC
CGAATGCGGCATTGCCAGAC

Product: pteridine reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTDSSKVVLITGAARRIGAQIATTLHAAGYRVALHAHRSAEVLDARVAELCAQRAGSAHALHADLRLPDAPAQLVADCVA
AFGRLDGVVNNASAFYSTAIGEATAAQWDELFAVNARAPFFIAQAAAAQLRQRRGAIVNLTDLHAQQPMRNHPLYGASKS
ALEMLTRSLALELAPHVRVNAVAPGAILWPEEGKSADAKQALLARTPLARIGTPEEIAEAVRWLLDEASFVTGHTLHVDG
GRQLS

Sequences:

>Translated_245_residues
MTDSSKVVLITGAARRIGAQIATTLHAAGYRVALHAHRSAEVLDARVAELCAQRAGSAHALHADLRLPDAPAQLVADCVA
AFGRLDGVVNNASAFYSTAIGEATAAQWDELFAVNARAPFFIAQAAAAQLRQRRGAIVNLTDLHAQQPMRNHPLYGASKS
ALEMLTRSLALELAPHVRVNAVAPGAILWPEEGKSADAKQALLARTPLARIGTPEEIAEAVRWLLDEASFVTGHTLHVDG
GRQLS
>Mature_244_residues
TDSSKVVLITGAARRIGAQIATTLHAAGYRVALHAHRSAEVLDARVAELCAQRAGSAHALHADLRLPDAPAQLVADCVAA
FGRLDGVVNNASAFYSTAIGEATAAQWDELFAVNARAPFFIAQAAAAQLRQRRGAIVNLTDLHAQQPMRNHPLYGASKSA
LEMLTRSLALELAPHVRVNAVAPGAILWPEEGKSADAKQALLARTPLARIGTPEEIAEAVRWLLDEASFVTGHTLHVDGG
RQLS

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=34.6938775510204, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=33.201581027668, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=30.3149606299213, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI59889578, Length=192, Percent_Identity=34.375, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=31.0204081632653, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=28.968253968254, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=30.1204819277108, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=30.1652892561983, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=28.9156626506024, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4503301, Length=217, Percent_Identity=24.4239631336406, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI33667109, Length=186, Percent_Identity=32.258064516129, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI66933014, Length=172, Percent_Identity=28.4883720930233, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=34.412955465587, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=30.8300395256917, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=32.156862745098, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=33.0645161290323, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI2367175, Length=257, Percent_Identity=29.9610894941634, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786812, Length=270, Percent_Identity=32.2222222222222, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787891, Length=240, Percent_Identity=29.1666666666667, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87082160, Length=242, Percent_Identity=26.8595041322314, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=30.2904564315353, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=34.8360655737705, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=29.6875, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.4878048780488, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787545, Length=262, Percent_Identity=29.0076335877863, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787526, Length=245, Percent_Identity=26.9387755102041, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787820, Length=239, Percent_Identity=24.6861924686192, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=36.734693877551, Blast_Score=133, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=34.1176470588235, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=32.5301204819277, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=32.4427480916031, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=32.5301204819277, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=30.6513409961686, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=31.0606060606061, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=30.3030303030303, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=29.9625468164794, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=29.2134831460674, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=29.3893129770992, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=30.2681992337165, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=28.4615384615385, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=30.5660377358491, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=28.968253968254, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=28.6259541984733, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=29.5019157088123, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=26.2357414448669, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=26.8939393939394, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=30.6451612903226, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=29.7959183673469, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=27.2030651340996, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=26.4367816091954, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=28.6259541984733, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=30, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=26, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=29.2490118577075, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=190, Percent_Identity=27.8947368421053, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=187, Percent_Identity=30.4812834224599, Blast_Score=83, Evalue=5e-17,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=34.2629482071713, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=34.5238095238095, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=31.7269076305221, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI28571526, Length=246, Percent_Identity=32.9268292682927, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=32.258064516129, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24644337, Length=256, Percent_Identity=35.9375, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=30.4526748971193, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25964; Mature: 25833

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSSKVVLITGAARRIGAQIATTLHAAGYRVALHAHRSAEVLDARVAELCAQRAGSAHA
CCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEE
LHADLRLPDAPAQLVADCVAAFGRLDGVVNNASAFYSTAIGEATAAQWDELFAVNARAPF
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHEEECCCCCH
FIAQAAAAQLRQRRGAIVNLTDLHAQQPMRNHPLYGASKSALEMLTRSLALELAPHVRVN
HHHHHHHHHHHHHCCCEEEEHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
AVAPGAILWPEEGKSADAKQALLARTPLARIGTPEEIAEAVRWLLDEASFVTGHTLHVDG
EECCCEEECCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECC
GRQLS
CCCCC
>Mature Secondary Structure 
TDSSKVVLITGAARRIGAQIATTLHAAGYRVALHAHRSAEVLDARVAELCAQRAGSAHA
CCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEE
LHADLRLPDAPAQLVADCVAAFGRLDGVVNNASAFYSTAIGEATAAQWDELFAVNARAPF
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHEEECCCCCH
FIAQAAAAQLRQRRGAIVNLTDLHAQQPMRNHPLYGASKSALEMLTRSLALELAPHVRVN
HHHHHHHHHHHHHCCCEEEEHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
AVAPGAILWPEEGKSADAKQALLARTPLARIGTPEEIAEAVRWLLDEASFVTGHTLHVDG
EECCCEEECCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECC
GRQLS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA