| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is 78046287
Identifier: 78046287
GI number: 78046287
Start: 834370
End: 835182
Strand: Reverse
Name: 78046287
Synonym: XCV0731
Alternate gene names: NA
Gene position: 835182-834370 (Counterclockwise)
Preceding gene: 78046289
Following gene: 78046282
Centisome position: 16.13
GC content: 68.14
Gene sequence:
>813_bases GTGTGGCCGAAGTCTGCCTCAAACAAAGACAGCTTGCCGGGCACCGCCCCCGCGCCGATGCTGCTCCCCATGAATGAAGA CGTCTCGCAGCTGATCATGGTTGTCGCGGTATTCCTGTTGGCTGGCGCGGTCAAAGGCGTGGCCGGCATGGGGCTGCCAA CGGTGGCAATGGGGTTGCTGGGGCTGTGGCTTCCGCCCAGCCAGGCCGCCGCGCTGCTGGTGCTGCCTTCGTTGGTGACG AATCTGCAACAGGCCTGGGGGCCAGCTGCGACCGAGCTGTTGCGGCGTCTGTGGCCGGTGCTGGCCATGGTGGTGGCGGG CACCTGGTTGAGCGCCGGGTTGATGATTGGCGGTCATCCGCGTTACCTGCGCGGCGCACTTGGGGTCCTGCTGGTTGCCT ATGCCCTGTTGGGGCTTGCCCGCCGGCAATGGACCCTGCCGCCACGTCACGAGCGCTGGGGCAGCCCGCTGATCGGCCTG GTCGGTGGCCTGCTCAGTGGCGCCACCGGCGTGCTGGTCCTCCCGGTAGTGCCGTACCTCTCTGCACTGGGCCTGCCACG CGAGGTGTTGATCCGCGCACTGGCCGCGTGCTTCGGTACGGCAACGCTTGCGCTGGCCATCGCACTGGTCTGGCACGGTG GCGTGCCGCTCTCGGCCGGCCTCCCATCGCTGCTGGCGTTGCTGCCCACCGCGCTGGGAGTGTGGGCCGGTACGAAGCTG CGACGCCGCATCTCTCCCGAGGCATTCCGCCGGATATTTTTCGGCACCTTGCTGCTGCTCGGCCTGCAGGCCTGCTGGCA GGCCATCGCCTAA
Upstream 100 bases:
>100_bases CCACGCGGTCGGCGCCGGCGGTGATGCTGCCGGTATCGGCCACCGCAACAAAGATCCGCAAGTCGGTGAATTCCACCTGC ATCTGCACCTCCAGCCTTCG
Downstream 100 bases:
>100_bases GACGCTGCCAGCGGCAACACTACTGTCCAAATGAAAACGCCACCGGCAAGCGGTGGCGCCCATGCATTGAATCGGCAGTC TGGCTCAGTCTGCCCAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MWPKSASNKDSLPGTAPAPMLLPMNEDVSQLIMVVAVFLLAGAVKGVAGMGLPTVAMGLLGLWLPPSQAAALLVLPSLVT NLQQAWGPAATELLRRLWPVLAMVVAGTWLSAGLMIGGHPRYLRGALGVLLVAYALLGLARRQWTLPPRHERWGSPLIGL VGGLLSGATGVLVLPVVPYLSALGLPREVLIRALAACFGTATLALAIALVWHGGVPLSAGLPSLLALLPTALGVWAGTKL RRRISPEAFRRIFFGTLLLLGLQACWQAIA
Sequences:
>Translated_270_residues MWPKSASNKDSLPGTAPAPMLLPMNEDVSQLIMVVAVFLLAGAVKGVAGMGLPTVAMGLLGLWLPPSQAAALLVLPSLVT NLQQAWGPAATELLRRLWPVLAMVVAGTWLSAGLMIGGHPRYLRGALGVLLVAYALLGLARRQWTLPPRHERWGSPLIGL VGGLLSGATGVLVLPVVPYLSALGLPREVLIRALAACFGTATLALAIALVWHGGVPLSAGLPSLLALLPTALGVWAGTKL RRRISPEAFRRIFFGTLLLLGLQACWQAIA >Mature_270_residues MWPKSASNKDSLPGTAPAPMLLPMNEDVSQLIMVVAVFLLAGAVKGVAGMGLPTVAMGLLGLWLPPSQAAALLVLPSLVT NLQQAWGPAATELLRRLWPVLAMVVAGTWLSAGLMIGGHPRYLRGALGVLLVAYALLGLARRQWTLPPRHERWGSPLIGL VGGLLSGATGVLVLPVVPYLSALGLPREVLIRALAACFGTATLALAIALVWHGGVPLSAGLPSLLALLPTALGVWAGTKL RRRISPEAFRRIFFGTLLLLGLQACWQAIA
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28274; Mature: 28274
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPKSASNKDSLPGTAPAPMLLPMNEDVSQLIMVVAVFLLAGAVKGVAGMGLPTVAMGLL CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GLWLPPSQAAALLVLPSLVTNLQQAWGPAATELLRRLWPVLAMVVAGTWLSAGLMIGGHP HHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH RYLRGALGVLLVAYALLGLARRQWTLPPRHERWGSPLIGLVGGLLSGATGVLVLPVVPYL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH SALGLPREVLIRALAACFGTATLALAIALVWHGGVPLSAGLPSLLALLPTALGVWAGTKL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHH RRRISPEAFRRIFFGTLLLLGLQACWQAIA HHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWPKSASNKDSLPGTAPAPMLLPMNEDVSQLIMVVAVFLLAGAVKGVAGMGLPTVAMGLL CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GLWLPPSQAAALLVLPSLVTNLQQAWGPAATELLRRLWPVLAMVVAGTWLSAGLMIGGHP HHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH RYLRGALGVLLVAYALLGLARRQWTLPPRHERWGSPLIGLVGGLLSGATGVLVLPVVPYL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH SALGLPREVLIRALAACFGTATLALAIALVWHGGVPLSAGLPSLLALLPTALGVWAGTKL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHH RRRISPEAFRRIFFGTLLLLGLQACWQAIA HHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA