| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046282
Identifier: 78046282
GI number: 78046282
Start: 828383
End: 829444
Strand: Reverse
Name: 78046282
Synonym: XCV0726
Alternate gene names: NA
Gene position: 829444-828383 (Counterclockwise)
Preceding gene: 78046287
Following gene: 78046272
Centisome position: 16.02
GC content: 65.35
Gene sequence:
>1062_bases ATGCTCCGACCGCACGCGTTGTCTGCTGCCTTGCTGCTTTCTCTTTCCGGGCTGTCGTTGCCGGCCCTGGCGGCGGATCA GTGCGATTCCAGCCGTCTTGGGCGCACGCCGCCTGCGGTGAACTTCCGTGTCGATAACGACTTGTTCGGCGGCGAGGATC AGGACCAGGGGTATTCCAACGGCGCGGTACTGACATTGGTGTCGCCGAACCTGGTCGATTACACCGACGATCCGTGCCTG CCGCGGACTGCGCGGTGGGTCAACAGCTATCTGGAGCGGCTGCACCCGGGCGAGTTCGACCAGCAGAACATGGTGTTCTC CATCGGCCAGGCGATCTTCACCCCGACCGATTACACCCGCCGCGACGTCATCCCGGACGACCGCCCCTATGCCGGCATCC TGCTGGCGAGCTTCGGCTACAACGCGCGTAACGATGCGCACCTGCGCACCACGCAGTTGCAGGTCGGCGTTGTCGGCCCG TGGGCGCTTGCGAAGGAAGCGCAGGATGCGATCCACGATGCGCTCGGGGACGAGAAATTCCAGGGCTGGGACAACCAACT GCACAACGAACCGCTGATCAACCTGGTGCACGAGCGCATGCATCGCTGGCCGGCCGATGCCAGCGGCAATGCCGGTGGGT TCGGCTGGGATTTCATTTCGCATTGGGGCGGCGCGGTCGGCAACATGGCCACGCACTTGAATGCAGGCGGCGAAGCGCGC TTCGGCTGGAAGCTGCCGGACGACTTCGGCAGCACCCCGACCCGCCCCGCGGGCGAAAACACCGCCCCCAGCCGGCTCGG GCGCGCCAGCGGCTGGTCCGGCCACCTGTTCGTCACCACCGACGCGCGCTGGGTGATCCGCGACATCACCCTGGACGGCA ACACCTTCCGCAACAGCCATAGCGTGGACAAGCGCCCGTTCGTCGGCGATGTGGGCTACGGCCTGGCAGTGATGTACGGC CGCTGGAAATTCGCCCTCGCCCGCTACCACCGTACCCGCGAATTCGACACCCAGCGCGAAACGCCGGTGTATGGCAGTTT TACGATCAGTCGAATGCTTTGA
Upstream 100 bases:
>100_bases GCCGAAGCGGCAGAGGCTGCAGTCGCGGCCACGCACTTCACACGGCGCAACAGAAGACGCAGGCATTTTTCCGATTCCAG CTCTCCTCCCCAGGTCCTCC
Downstream 100 bases:
>100_bases AGGCAGGGATTGGGGATTCGCAAGAGCGGGCCAGCAATGCGTTTTGTTCGCTGCCGGCCTGGATGTTTGATCGTGGTTAC CGGGCCTTGGGATTTGGGAG
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MLRPHALSAALLLSLSGLSLPALAADQCDSSRLGRTPPAVNFRVDNDLFGGEDQDQGYSNGAVLTLVSPNLVDYTDDPCL PRTARWVNSYLERLHPGEFDQQNMVFSIGQAIFTPTDYTRRDVIPDDRPYAGILLASFGYNARNDAHLRTTQLQVGVVGP WALAKEAQDAIHDALGDEKFQGWDNQLHNEPLINLVHERMHRWPADASGNAGGFGWDFISHWGGAVGNMATHLNAGGEAR FGWKLPDDFGSTPTRPAGENTAPSRLGRASGWSGHLFVTTDARWVIRDITLDGNTFRNSHSVDKRPFVGDVGYGLAVMYG RWKFALARYHRTREFDTQRETPVYGSFTISRML
Sequences:
>Translated_353_residues MLRPHALSAALLLSLSGLSLPALAADQCDSSRLGRTPPAVNFRVDNDLFGGEDQDQGYSNGAVLTLVSPNLVDYTDDPCL PRTARWVNSYLERLHPGEFDQQNMVFSIGQAIFTPTDYTRRDVIPDDRPYAGILLASFGYNARNDAHLRTTQLQVGVVGP WALAKEAQDAIHDALGDEKFQGWDNQLHNEPLINLVHERMHRWPADASGNAGGFGWDFISHWGGAVGNMATHLNAGGEAR FGWKLPDDFGSTPTRPAGENTAPSRLGRASGWSGHLFVTTDARWVIRDITLDGNTFRNSHSVDKRPFVGDVGYGLAVMYG RWKFALARYHRTREFDTQRETPVYGSFTISRML >Mature_353_residues MLRPHALSAALLLSLSGLSLPALAADQCDSSRLGRTPPAVNFRVDNDLFGGEDQDQGYSNGAVLTLVSPNLVDYTDDPCL PRTARWVNSYLERLHPGEFDQQNMVFSIGQAIFTPTDYTRRDVIPDDRPYAGILLASFGYNARNDAHLRTTQLQVGVVGP WALAKEAQDAIHDALGDEKFQGWDNQLHNEPLINLVHERMHRWPADASGNAGGFGWDFISHWGGAVGNMATHLNAGGEAR FGWKLPDDFGSTPTRPAGENTAPSRLGRASGWSGHLFVTTDARWVIRDITLDGNTFRNSHSVDKRPFVGDVGYGLAVMYG RWKFALARYHRTREFDTQRETPVYGSFTISRML
Specific function: Unknown
COG id: COG3528
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39101; Mature: 39101
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPHALSAALLLSLSGLSLPALAADQCDSSRLGRTPPAVNFRVDNDLFGGEDQDQGYSN CCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GAVLTLVSPNLVDYTDDPCLPRTARWVNSYLERLHPGEFDQQNMVFSIGQAIFTPTDYTR CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC RDVIPDDRPYAGILLASFGYNARNDAHLRTTQLQVGVVGPWALAKEAQDAIHDALGDEKF CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCHH QGWDNQLHNEPLINLVHERMHRWPADASGNAGGFGWDFISHWGGAVGNMATHLNAGGEAR CCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCE FGWKLPDDFGSTPTRPAGENTAPSRLGRASGWSGHLFVTTDARWVIRDITLDGNTFRNSH ECCCCCHHCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCC SVDKRPFVGDVGYGLAVMYGRWKFALARYHRTREFDTQRETPVYGSFTISRML CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCC >Mature Secondary Structure MLRPHALSAALLLSLSGLSLPALAADQCDSSRLGRTPPAVNFRVDNDLFGGEDQDQGYSN CCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GAVLTLVSPNLVDYTDDPCLPRTARWVNSYLERLHPGEFDQQNMVFSIGQAIFTPTDYTR CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC RDVIPDDRPYAGILLASFGYNARNDAHLRTTQLQVGVVGPWALAKEAQDAIHDALGDEKF CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCHH QGWDNQLHNEPLINLVHERMHRWPADASGNAGGFGWDFISHWGGAVGNMATHLNAGGEAR CCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCE FGWKLPDDFGSTPTRPAGENTAPSRLGRASGWSGHLFVTTDARWVIRDITLDGNTFRNSH ECCCCCHHCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCC SVDKRPFVGDVGYGLAVMYGRWKFALARYHRTREFDTQRETPVYGSFTISRML CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA